| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 6,159,202 | Δ6,596 bp | PP_5404 CDS (Transposition protein_ TnsC‑related protein)–PP_5407 CDS (Transposition protein_ TnsD‑related protein) | PP_5404 CDS (Transposition protein_ TnsC‑related protein), PP_5405 CDS (transposase), PP_5406 CDS (transposase), PP_5407 CDS (Transposition protein_ TnsD‑related protein) | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 6159202 | 6165797 | 6596 | 1067 [0] | [0] 1070 | PP_5404 CDS (Transposition protein_ TnsC‑related protein)–PP_5407 CDS (Transposition protein_ TnsD‑related protein) | PP_5404 CDS (Transposition protein_ TnsC‑related protein),PP_5405 CDS (transposase),PP_5406 CDS (transposase),PP_5407 CDS (Transposition protein_ TnsD‑related protein) |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 6159201 | 0 (0.000) | 1060 (1.260) | 150/266 | 0.0 | 100% | intergenic (+21/+2) | PP_5403 CDS (conserved protein of unknown function)/PP_5404 CDS (Transposition protein_ TnsC‑related protein) | –/– |
| ? | AE015451_phaM1 | 6165798 = | 0 (0.000) | intergenic (+3/+591) | PP_5407 CDS (Transposition protein_ TnsD‑related protein)/PP_5408 CDS (conserved protein of unknown function) | –/– | |||||