| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 5,485,153 | 0 | A | G | 31.7% | 136.5 / 14.7 | 88 | intergenic (+59/‑88) | purH CDS (phosphoribosylaminoimidazolecarboxamide formyltransferase_IMP cyclohydrolase)/purD CDS (Phosphoribosylamine‑‑glycine ligase) | –/– |
| Reads supporting (aligned to +/- strand): ref base A (20/36); new base G (1/25); total (21/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTG > AE015451_phaM1/5485018‑5485285 | aTGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGAt < 2:17482131/137‑1 (MQ=255)aTGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGAt < 2:14758676/137‑1 (MQ=255)aTGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGAt < 2:9126474/137‑1 (MQ=255)aTGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGAt < 2:18895951/137‑1 (MQ=255)aTGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGAt < 2:9126439/137‑1 (MQ=255)aTGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGAt < 2:17352466/137‑1 (MQ=255) gTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGATGCAAGTCTAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGAtt < 1:13777929/137‑1 (MQ=255) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCa < 2:3128974/137‑1 (MQ=255) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccg < 2:17697209/137‑1 (MQ=255) ctgctgCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 1:11512147/137‑1 (MQ=255) ctgctgCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 1:1596009/137‑1 (MQ=255) ctgctgCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 1:14507988/137‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCa < 1:3109143/137‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCa < 1:15996299/137‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCa < 1:15996985/137‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCa < 1:3153030/137‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCa < 2:2195297/137‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCa < 1:14373235/137‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCa < 1:13898669/137‑1 (MQ=255) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCAt < 2:10291264/137‑1 (MQ=255) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCAt < 1:16426481/137‑1 (MQ=255) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCAt < 1:12903948/137‑1 (MQ=255) gcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCAtt < 1:11594261/137‑1 (MQ=255) gCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑Caa < 2:6157119/137‑1 (MQ=255) cgcgATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCTCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTc < 1:3151076/137‑1 (MQ=255) ttCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGTTGCCCTCGAGTACAGCGGTTGGTTCCCCTTCTCATTCTCTGG‑CAGGCCCTCTCCCACCATGtt > 2:8953684/1‑137 (MQ=255) cgcTGGCGTGCTCTACTTCCGCCACGAGTTCTTCGGATCCAGAGAAAGTTAGAGCCTTTGTGGGAGCGGGTTTACCCGAGAAGACGAGGTGGGGTTCACCACTGCATTCGTGGG‑CAATCCCGCTCCCACAGTGTTCg < 2:13734276/135‑1 (MQ=255) cgtGCTCCCCTCCCCCCACTACTTACGCGAATCCTGAGTCAGGCCGAGCCCTTGGGGGAGCGGTCTTGCCCGAGAATCCGTTGGTGGGTTCCCCTCGGCCTTCGTGGG‑AAACCCCACTCCCACAGTGTTCGGCGCaa < 2:10742311/135‑1 (MQ=255) cgtGCACCACTCCCCCCCCTAATCACGCGTATCCCGAAACAATTCGAGATTTTGTGGGGGCGGCCTTCCCCCCGAACACGCTGGTAGCTCCACCTCCACGTCCGTGGC‑CACTCCCGCTCCCACAGTGTTCGGCGCaa < 2:47619/135‑1 (MQ=255) tGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGTTGTCCACTAAGACAACGGGGGGGTCCCCCCCCCCCCCCCTGG‑CAAGCCCCCCCCCCCAACGTTCTGCGCaaac > 2:13287623/1‑135 (MQ=255) tGCGCAACTCCCGCCACTAATCCCGCGAATCACGAGACAAGTCGAGATCCTGTGGGAGCGGGCTTGCACGCGACGACGATGGTGGATTCACCGCCGCATTCGCAGG‑CAAGAACGCTCCCACAGTGTTCGGCGCAAGc > 2:8991168/1‑137 (MQ=255) gcgcCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGTTGTCCCCGAAAACGACGGTGGAGTCCCCCCCCAACTCGCGGG‑GAAGCACCCCCCCACCATGGTTGGCGCaaaac > 2:4632702/1‑134 (MQ=255) gcgcCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGATTGCCCGCAAACAAGAGAGTGGATTCACTACCACACCCGCGAG‑CAAACCCGCCCCCCCAACGTTCTGCGCAAAcc > 1:15774062/1‑137 (MQ=255) tccATTTCCACCATAAGTTACTCGGGTCCCGGGGCAGGTTGCGATCCTGTGGAATTGGCCTTGCCTGCAACTACGCTTGTGGCTCCACCACCCCCTTTGCGGC‑AAACCCCGCTCCCACAGTGTTCGGCGCAAGCCAc < 2:4708776/136‑1 (MQ=255) tccACTTCCGCCACTAGTTACGCGGATCCCGAGGAAGGTCGAGATCCTGTGGGAGCGGGCTTGCCTGTGAGGACGGTGGGGGATTCACCTCCGCATTCGCGGA‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCAc < 2:14103082/136‑1 (MQ=37) gcCACTTCCTCCACTACTTACTCGGATCCCGGGGCAAGTCGAGGTCTTGTGGGAGCGGGTTTGCCCGAGAAGACGGTGGTGGATTCACCGCCGCATTCGCGGG‑AAATCCCGCTCCCACAGTGTTCGGCGCAAGCCAc < 2:3186506/137‑1 (MQ=255) gcCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGTTTTCCACGAACACAACGGTGGAGTCACCACCACCCTCGCGGGACAAACCC‑CCCCCCCAACGTTCGGCGCAAACCAc > 2:13446282/1‑137 (MQ=255) gcCACTTCCACCACTAATTACGCAGACCCTGGGACAAGTCGAGCTCTGGGGGGGGCGGGCTTCCCCGCGAATATGGTGGTGGCTCCACTACCCCGTTTGGGGG‑AAATCCCGCTCCCACAGTGTTCGGCGCAAGCCAc < 2:5168060/137‑1 (MQ=255) actaCTTCCGCAACTGATTACGCGGCCCTCGGGGAAGGTAAGGCCCCGGGGGGAGCGGGCTGGCCCGAAAAAACGGGGGGGGAGCCACCGCAGCATTGGGGGA‑AAATCCCGCTCCCACAGTGTTCGGCGCAAGCCAc < 2:3186538/134‑1 (MQ=255) accACTTCCCCCGTGAATTACGCGGATCCTGAGGAGATTCGAGGTCCGGTGGGGGCGGTTTTATCCGCAAATACGCTGGTGGATTCACCCCCGCGTTCGTGGG‑AAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCAc < 2:12326120/136‑1 (MQ=255) cACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGGTTGCCCGCGAAGACAACGGTGGATTCACCACCACATTTTCGGG‑CAAGCCCGCTCCCACAACGTTCGGCGCAAACCAcag > 1:774036/1‑135 (MQ=37) cACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTTTCGGG‑CAAACCCACCCCCACAATGTTCGGCGCAAGCCACgg > 1:774085/1‑137 (MQ=39) ttCCGCCACTAAGTACGTGGATCCAGAGACAGGTAGAGATCCTGGGGGAGCGGGTTTGCCCGAGAATACGAGGGTGGATTCACCGCCGCATTCGCGGA‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGAt < 2:9173216/137‑1 (MQ=255) cTAATTACGTGCATCCTGAGAAGAGTTGAGGTCTTGGGGGGGCGTGCCTGCCAAGGAATCCGGGGGTGGGTTCACCTCTGCGTTCGTGGG‑AAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGaa < 2:13272808/137‑1 (MQ=255) cgcgGCTCCTGAGACAGGTAGAGCTCTTGTGGGGGCGGTCTTCCCCGAAAAGACGGTGGTGGCTCCACCGCCCCGTTCGCGGA‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGt < 2:12307303/137‑1 (MQ=255) ccagAGGAAATTCGAGGCCCTGGGGAAGCGGTCTTCCCTACGAGGAAGGGGGGGGGTTCACGCCCCCATCCATGGG‑AAATCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACa < 2:17004524/134‑1 (MQ=255) gCAAGTGGAGCTTTTGTGGGAGTGGGCTTGCCCGAGAAGATGGTGGGGGTTCCCCCGCCCCGTTCGCGGA‑CAATCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAg < 2:10070027/137‑1 (MQ=255) tCGAGCTCCTGTGGAGGCGGTCTTACCCGAAAGTACGATGGTGGATTCACCTCCACATTCGTGGG‑CAATCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTg < 2:15652910/137‑1 (MQ=255) gaTCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCACGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGatca < 1:2023408/137‑1 (MQ=255) aTCTTGGGGGGGCTGTCTTCCCCGCGAATATGGTGGGGGATTCACCGCCGCGTTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGatcat < 2:13634811/137‑1 (MQ=255) ttttgGGGGTGGGTTTGCCCACGAATACGGTGTTGGCTTCACCCCCGCGTTCGCGGC‑AAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCgg < 2:16601889/134‑1 (MQ=255) gtgGGAGCGTGCGTCCCCTAAAGTCCGGTGGTGGGTTCCCCCCCACATTCGTAGA‑CACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCa < 1:15759250/137‑1 (MQ=255) gggggAGCGGTCTTGCCTGCGAATACGGTGGTGGATCCACCTCCTCATCTGCGGG‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCa < 1:15759292/135‑1 (MQ=255) gggAGCGGTCTTCCCCGCGAGTCCGCTGGTGGCTCCACCCCCGCCTTCGTGGA‑CAAACCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGc < 2:17274113/137‑1 (MQ=255) gCGGTCTTGCCCGGGAGTATGGGGGTGGCTCCACCTCCGCGTTCCCGGG‑AACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTg < 2:18536800/137‑1 (MQ=255) gCGGGTTTGCCTGAGAGTACGATGGTGGGTTCGCCTCCTCGTTTGTGGG‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTg < 2:8954928/137‑1 (MQ=255) gCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTg > 1:17060273/1‑137 (MQ=255) cGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGA‑CAAGCCCGCTCCCACAGTGGTCGGCGCAAGTCATGGGATTACGTGAATTGAGGTGTTGACATGGAAGTTTTGATTATCGGCAGCGGTgg < 2:9128287/137‑1 (MQ=255) tttGCCCGCGAAGACGGTGTTGACTTCACCGCCCCCTCCGCGGC‑AAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 2:2148408/136‑1 (MQ=255) tttGCCCGAGAATACGGGGGGGGCTCCACCACCGCATTCGTGGA‑CACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 2:11446587/136‑1 (MQ=255) cTTGCCCGCGAGTATGGTGGTGGATTAACCGCCCCATTTGCGGG‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 2:18544166/137‑1 (MQ=255) cTTCCCCGCGAAGACGATGTGGGCCTCACCGCCGCCTTCGCGGA‑CAATCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 2:1744680/137‑1 (MQ=255) ttGCCCGAGAAGATGATGTTGGTTTCCCCCCCACCTTCGTGGA‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTg < 2:9094859/137‑1 (MQ=255) ggccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAATTTTGATCATCGGCAGCGGTGGCCGTGAg > 1:17211076/3‑137 (MQ=255) tgcgAGTGCGGTGTTGGTTTCACTGCCTTGTTTGCGGG‑AAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 1:2239511/136‑1 (MQ=255) cgcgGATACGGTGGTGGATCCCCCCCCGCCTTCGCGGG‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:8188185/137‑1 (MQ=255) cgcgAGTATGGTGGTGGATTCCCCTCCTCTTTCTGGGG‑CAATCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:824880/137‑1 (MQ=255) cgcgAGTAGGATGGGGGATCCACCTCCACACCCGCGGA‑CACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:9378501/137‑1 (MQ=255) cgcgAGTACGGTGGTTGCTTCACCGCAGCCTTCGCGGA‑AAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:16920706/137‑1 (MQ=255) cgcgAGTACGGTGGTGGCTTCCCCTCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:14048827/137‑1 (MQ=255) cgcgACGACGGTGGGGGCTTCACCGCCAAATCACCGGC‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTGGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:6480931/137‑1 (MQ=255) cgcgAAGATGATGGTGGCTTCACCACCACGTTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:9489961/137‑1 (MQ=255) cgagAATATGGTGGTGGATCCCCCTCCGCCTTCGCGGA‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:7232065/134‑1 (MQ=255) cgaaaaTAAGATGGTGGATCCCCCTCCGCCTTCGCGGC‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:11493625/133‑1 (MQ=255) cccaaaTATGTTGGTGGATCCGCCTCCGCGTTCGCGGA‑AAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:10219450/133‑1 (MQ=255) cacgAATACGGTGGTGGCTCCACCTCCGCCTTCGCGGA‑AAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 2:2119989/135‑1 (MQ=255) gcgAAGACGGTGGGGGATTCACCTCCGCATTTACGGA‑CAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACg < 1:13960368/137‑1 (MQ=255) cgAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGc > 1:6790095/1‑137 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcct > 1:17390141/1‑137 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcct > 2:1813823/1‑137 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcct > 1:17390142/1‑137 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcct > 2:14472991/1‑137 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCACGCCACGGGATCACTTGCATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCCGCGGTGGCCGTGAGCACGCcctg > 2:9792736/1‑137 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:17903209/1‑137 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:14428259/1‑137 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:12365840/1‑137 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:9792697/1‑137 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:11729042/1‑137 (MQ=255) | ATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTG > AE015451_phaM1/5485018‑5485285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |