| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 5,701,209 | C→A | intergenic (+1955/‑2050) | PP_5002 CDS (conserved protein of unknown function) → / → PP_5009 CDS (conserved protein of unknown function) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 5,701,209 | 0 | C | A | 99.7% | 2594.5 / NA | 706 | intergenic (+1955/‑2050) | PP_5002 CDS (conserved protein of unknown function)/PP_5009 CDS (conserved protein of unknown function) | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (338/366); minor base G (0/2); total (338/368) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 721 total aligned reads displayed.
GTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCGATC > AE015451_phaM1/5701075‑5701340 | cGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGTTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGgagcgc < 2:18288940/137‑1 (MQ=255) gCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCt > 1:14623154/1‑137 (MQ=255) gTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCaa < 1:11985821/137‑1 (MQ=255) tGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAAc < 2:7349274/137‑1 (MQ=255) tGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAAc < 1:15865445/137‑1 (MQ=255) tGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAAc < 2:16035397/137‑1 (MQ=255) tctcGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAg < 1:2335946/137‑1 (MQ=255) cGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCgg < 2:17845411/137‑1 (MQ=255) gCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGAt < 2:18088164/137‑1 (MQ=255) cTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCt > 2:9043895/1‑137 (MQ=255) tGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACg < 2:15605141/137‑1 (MQ=255) tGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACg < 2:1850668/137‑1 (MQ=255) tGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACg < 1:15538636/137‑1 (MQ=255) ccGGTCTGCGCTCGGTGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgag > 1:8145331/1‑137 (MQ=255) ccGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgag > 2:11513139/1‑137 (MQ=255) ccGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAAAGAGCGGATCTACgag > 2:3484539/1‑137 (MQ=255) cGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgaga > 1:1987825/1‑137 (MQ=255) cGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgaga > 1:102685/1‑137 (MQ=255) cGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgaga > 2:6720313/1‑137 (MQ=255) cGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgaga > 2:695353/1‑137 (MQ=255) cGGTCTACGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCCGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgaga > 1:3565135/1‑137 (MQ=255) ggTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAc < 2:10847013/137‑1 (MQ=255) ggTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAc < 1:18547863/137‑1 (MQ=255) gTCTGCGCTCGGCGGCCTTCAACGTCTATGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCGGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACg < 2:12488644/137‑1 (MQ=255) gTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAGGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACg < 2:13136036/137‑1 (MQ=255) gTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACg < 2:17451696/137‑1 (MQ=255) gTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACg < 2:16869336/137‑1 (MQ=255) gTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACg < 1:5898603/137‑1 (MQ=255) gTCTGCGCTCGGAGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACg < 1:132085/137‑1 (MQ=255) gcgcTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGTTGGAAGGCCCGCTGGCCGAGGCGGAAGCGCTCAAAGAGCGGACCTACGAGAAGGTGa > 2:12036366/1‑137 (MQ=255) gcgcTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGa > 2:5343114/1‑137 (MQ=255) gcgcTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGa > 1:3946586/1‑137 (MQ=255) gcgcTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGa > 2:11050496/1‑137 (MQ=255) gcgcTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGa > 2:13478790/1‑137 (MQ=255) gcgcTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGa > 1:6174939/1‑137 (MQ=255) tCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTc > 1:10071006/1‑137 (MQ=255) tCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTc > 2:6329382/1‑137 (MQ=255) gcCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 2:13890425/137‑1 (MQ=255) gcCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 2:9852309/137‑1 (MQ=255) gcCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 2:8327542/137‑1 (MQ=255) gcCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 1:7321450/137‑1 (MQ=255) gcCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 1:433223/137‑1 (MQ=255) gcCCTCAACGTCTACGTCAACGCCAAGGGCCGCGACGACCGCGCCTTCGCCGAGGAGCGGCGGAAGGAGCGGGAAGGCCGGCGGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 2:7987145/137‑1 (MQ=255) gcCCTCAACGTCTACGGCAACACCAAGGGCCTCGACGACTGCGCCTCCGCCGAGGAGCGGCTGAAGGAGTTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 2:1906982/137‑1 (MQ=255) cccTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTa < 2:15251194/137‑1 (MQ=255) tCAACGTCTACGTCAACGCCAAGGGCCTCGACGCCCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAACGGATCTACGAGACGGTGAAGTCCAAGGTAAAc > 1:13057839/1‑137 (MQ=255) tCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCATGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAAc > 2:16702219/1‑137 (MQ=255) cAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACt < 1:8328699/137‑1 (MQ=255) cAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACt < 1:14452490/137‑1 (MQ=255) aaCGTCTACGTCAACGCCAAGGGCCTCGACGACCGCACCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTg < 1:5263726/137‑1 (MQ=255) cGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAggg > 1:6675755/1‑137 (MQ=255) cAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAtt > 1:18328632/1‑137 (MQ=255) cAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAtt > 2:9484283/1‑137 (MQ=255) cAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAtt > 1:17279251/1‑137 (MQ=255) cAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAtt > 1:9244705/1‑137 (MQ=255) cAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTAAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAtt > 1:17981060/1‑137 (MQ=255) gggCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAt > 2:5757899/1‑137 (MQ=255) ggCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAtt < 1:7861372/137‑1 (MQ=255) ggCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAtt < 1:2218298/137‑1 (MQ=255) ggCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAtt < 2:14705478/137‑1 (MQ=255) gCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTa > 2:2103102/1‑137 (MQ=255) ccgcgacgaCCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAg < 2:9675461/134‑1 (MQ=255) ccTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAg > 1:12519743/1‑137 (MQ=255) ccTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAg < 1:1135743/137‑1 (MQ=255) ccTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAg < 2:3035879/137‑1 (MQ=255) ccTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAg < 1:16754543/137‑1 (MQ=255) cgacgaCCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAg < 1:8606685/137‑1 (MQ=255) gacgacCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAgg < 2:13827722/137‑1 (MQ=255) gacgacCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAgg < 2:10074478/137‑1 (MQ=255) gacgacCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAgg < 1:2699067/137‑1 (MQ=255) acgacCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGa > 2:10707974/1‑137 (MQ=255) ccGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCt < 2:10272952/137‑1 (MQ=255) gcgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCttt > 1:7004463/1‑137 (MQ=255) gcgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCttt > 2:4013707/1‑137 (MQ=255) gcgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCttt < 2:15099985/137‑1 (MQ=255) cgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCttt > 1:15120732/1‑136 (MQ=255) cgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTg > 1:10805302/1‑137 (MQ=255) cgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTg > 1:4911520/1‑137 (MQ=255) gcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGt < 2:10936/137‑1 (MQ=255) gcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCAGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGt > 2:2690801/1‑137 (MQ=255) cTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTAt > 1:14724790/1‑137 (MQ=255) gCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGccc < 2:11277447/137‑1 (MQ=255) ccGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCt > 2:8650650/1‑137 (MQ=255) agCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGata > 1:9771827/1‑137 (MQ=255) cGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATc > 1:1746795/1‑137 (MQ=255) cTGGAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGCAAACTGAACTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCgag > 2:12256142/1‑137 (MQ=255) aGGAGCTGGAAGGCCTGCTGGCCTAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCATGAGTCTTTGTATGCCCTCAGATATCGAGATCg < 1:8896122/137‑1 (MQ=255) ggAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGc > 1:13908131/1‑137 (MQ=255) tGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCcgcg < 2:13325420/137‑1 (MQ=255) ggAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCcgcgc < 1:4481361/137‑1 (MQ=255) ggAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCcgcgc < 1:16276613/137‑1 (MQ=255) gAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCcgcgcg > 2:4309722/1‑137 (MQ=255) gAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCcgcgcg > 2:16299351/1‑137 (MQ=255) gCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGTGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGa > 1:3031376/1‑137 (MQ=255) tgctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGAccc > 1:11208051/1‑137 (MQ=255) gctgGCCGAGGCGGGAGCGCTCCACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCt > 2:12915300/1‑137 (MQ=255) gctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCt > 2:5044383/1‑137 (MQ=255) gctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCt > 2:2360888/1‑137 (MQ=255) ctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTg > 2:7661570/1‑137 (MQ=255) ggcgggagCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCGAt > 1:16535698/1‑137 (MQ=255) | GTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCGATC > AE015451_phaM1/5701075‑5701340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |