BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AE015451_phaM1	499,203	A→G	intergenic (+47/‑249)	uhpA CDS (DNA‑binding response regulator UhpA) → / → PP_0411 CDS (Polyamine ABC transporter_ ATP‑binding protein)	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AE015451_phaM1	499,203	0	A	G	100.0%	859.0 / NA	216	intergenic (+47/‑249)	uhpA CDS (DNA‑binding response regulator UhpA)/PP_0411 CDS (Polyamine ABC transporter_ ATP‑binding protein)	–/–
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (44/172); total (44/172)

Only 100 of 216 total aligned reads displayed.

CCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCAGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCCTCTTCGC‑‑GGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGC  >  AE015451_phaM1/499072‑499332

ccACAAGGAACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTTGCGGAGCTGGTGAATTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCAt                                                                                                                                  <  2:17238897/137‑1 (MQ=255)

  acaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATgg                                                                                                                                >  1:9256085/1‑136 (MQ=255)

  acaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGc                                                                                                                                <  2:17488629/137‑1 (MQ=255)

    aaGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGccc                                                                                                                              <  1:6303244/137‑1 (MQ=255)

    aaGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGAATGtcc                                                                                                                              >  1:17264884/1‑137 (MQ=255)

     aGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCTGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcg                                                                                                                             <  1:16240166/137‑1 (MQ=255)

     aGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGccca                                                                                                                             >  1:9155751/1‑136 (MQ=255)

     aGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcg                                                                                                                             >  1:16088967/1‑137 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:17698944/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:5775245/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:6889266/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:17899340/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:2266025/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:5938753/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:5222789/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:5631795/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:7861142/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:8095635/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:10130213/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:17781923/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:14831066/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:15126484/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:9664792/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:10555619/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:7097262/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  1:16417231/137‑1 (MQ=255)

      ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCcgc                                                                                                                            <  2:9580993/137‑1 (MQ=255)

      ggCACGCATGATGCAGAAGTTGAAAGTGAACTCGTTGGCGGAGTTAGTGAAATACGCCATTGAGCACAAGCTGATCTGATTGCGACATATGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCtgc                                                                                                                            <  2:16723759/137‑1 (MQ=255)

           gcttGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑g                                                                                                                      <  2:12132793/134‑1 (MQ=255)

           gcatGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCAAGGGAGCACAAGCTGATCGGATTGCGACAGACGGGTGCCCGAAACTTGCCGAAGCTTATGTGGGAGCGGGCATGCCCGCGAAC‑g                                                                                                                      <  1:797118/134‑1 (MQ=255)

           gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCTATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑g                                                                                                                      <  2:5014749/137‑1 (MQ=255)

           gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑g                                                                                                                      <  2:7377430/137‑1 (MQ=255)

           gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑g                                                                                                                      <  1:14860185/137‑1 (MQ=255)

           gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑g                                                                                                                      <  1:8572477/137‑1 (MQ=255)

            ccTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑gg                                                                                                                     <  2:2667340/137‑1 (MQ=255)

             cTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATGCCCGCGAAC‑agg                                                                                                                    >  1:3685661/1‑137 (MQ=255)

             cTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATGCCCGCGAAA‑ggg                                                                                                                    >  2:3086129/1‑137 (MQ=255)

             cTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCCaaaagg                                                                                                                     >  2:16119980/1‑133 (MQ=255)

              tGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggc                                                                                                                   <  1:11507606/137‑1 (MQ=255)

               gATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATGCCCGCGAAC‑gagac                                                                                                                  >  1:13690377/1‑133 (MQ=255)

               gATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATGCCCACGAAC‑gggac                                                                                                                  >  2:6578390/1‑135 (MQ=255)

                aTGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATGCCCGCGAAC‑aggacc                                                                                                                 >  2:11228809/1‑134 (MQ=255)

                aTGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGAAC‑Gggcct                                                                                                                 <  1:15655286/137‑1 (MQ=255)

                aTGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggcct                                                                                                                 <  2:15198020/137‑1 (MQ=255)

                 tGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggcctg                                                                                                                <  2:17773927/137‑1 (MQ=255)

                   cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGGGGGCCGCGAAA‑ggggatggt                                                                                                              >  1:3456990/1‑131 (MQ=255)

                   cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggcctggc                                                                                                              <  1:11290304/137‑1 (MQ=255)

                   cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggcctggc                                                                                                              <  1:10013311/137‑1 (MQ=255)

                   cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggcctggc                                                                                                              <  2:1835723/137‑1 (MQ=255)

                   cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGAATGCCCAAGAAC‑gggaatgga                                                                                                              >  2:13794777/1‑131 (MQ=255)

                     gAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggcctggcct                                                                                                            <  1:12153469/137‑1 (MQ=255)

                      aaGTTGAAAGTGACCCCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:17679910/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  1:4274168/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:825444/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:17097657/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  1:11908432/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:18947583/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:2019897/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  1:9654556/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:8534300/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:8439288/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  1:14699096/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  1:6190753/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  1:5245168/137‑1 (MQ=255)

                      aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  1:15491579/137‑1 (MQ=255)

                      aaGTTGAAAGCGAACTCGCTGGCGGGGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:16655193/137‑1 (MQ=255)

                        gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTTATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCctg‑ct                                                                                                        <  2:16371408/137‑1 (MQ=255)

                        gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCctg‑ct                                                                                                        <  2:644081/137‑1 (MQ=255)

                        gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCctg‑ct                                                                                                        <  2:10737876/137‑1 (MQ=255)

                        gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCctg‑ct                                                                                                        <  2:7171638/137‑1 (MQ=255)

                        gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCctg‑ct                                                                                                        <  1:17764744/137‑1 (MQ=255)

                        gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCctg‑ct                                                                                                        <  2:10737918/137‑1 (MQ=255)

                        gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCGGATCTGATTGCGACATACGGGTGCCCGAAACTGGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCctg‑ct                                                                                                        <  1:17571569/137‑1 (MQ=255)

                            aaaGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGAtc                                                                                                    <  1:9975970/137‑1 (MQ=255)

                                tGAACTCGCTGGCGGAGCGGGGGAAGTACGCCATGGAGCACAAGCTGATCGGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTa                                                                                                <  2:11949712/137‑1 (MQ=255)

                                tGAACTCGCCGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTa                                                                                                <  2:7998305/137‑1 (MQ=255)

                                  aaCTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATg                                                                                              <  1:13786901/137‑1 (MQ=255)

                                     tCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑Gggcctggc                                                                                                              >  2:6259427/1‑119 (MQ=255)

                                            cGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCgg                                                                                    <  1:3374374/137‑1 (MQ=255)

                                                gCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCctc                                                                                <  1:7124532/137‑1 (MQ=255)

                                                gCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCctc                                                                                <  1:13614823/137‑1 (MQ=255)

                                                 cTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCctct                                                                               <  1:16548126/137‑1 (MQ=255)

                                                 cTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCctct                                                                               <  1:17625496/137‑1 (MQ=255)

                                                 cTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCctct                                                                               <  1:17625533/137‑1 (MQ=255)

                                                      gAAGTACGCAAGGGAGCAAAAGCTGATCTGATTGCGACAGACGGGTGCCCAAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCAAAC‑GGGCCTGGCCTG‑CTGATCTCTGTGGCGGAGCCGGCCTTTTcgc‑‑g                                                                        <  2:10329606/137‑1 (MQ=255)

                                                       aaGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCCTCTTCGC‑‑gg                                                                       <  1:14477775/137‑1 (MQ=255)

                                                            cGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCACGAAACTTGCCGAAGCCTATGTGGGAGCGGGAATGCCCCCGAAC‑GGGACCGGCATGACTGGT‑TCTCTGGGTGAGCCAACCTCCTCCC‑‑GAGCagg                                                                  >  2:7155314/1‑135 (MQ=255)

                                                                    aGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATGTCCGCGCACAGGAACTGTCTTT‑TTG‑TCTCTCTGGTTGAGCCGTCCTCTTCCC‑‑GGGCCCGCCCGcccc                                                          >  1:10449499/1‑137 (MQ=255)

                                                                                         gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGATGCCCGCGAAC‑GGGCCCGGCCCG‑CCGGTTTCTCCGGATGGGACAGCACCCTCCC‑‑GGGCATACCCACTCCCACAAGTTTCGTGGTTGGTTc                                     >  2:4461521/1‑137 (MQ=255)

                                                                                         gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGAATGCCCGCGAAC‑AAGAATGGAACG‑CTGAGCTCTCTGGCTGGGCCAGCACCCCCGC‑‑GGGTATTCCCACCCCCCCCAGTTTCGTTGTTGGCTc                                     >  1:18225720/1‑137 (MQ=255)

                                                                                            aTACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAA‑GGGCCTTGCCTC‑CTGAGTTCTCTGGCTGGGTCAGCCTCCTCGT‑‑GGGCGTTTTCTCTCCCCCAAGTTTCGTGGTTGGCTTGCa                                  >  2:17059618/1‑137 (MQ=255)

                                                                                             gatgggTGCCAGAAACTTGCGGAAGCTGGTGGGGGGGGGGGCGTGCCTGGAAGT‑GGGCTGGGCCGG‑CGGATCTCGGGGGTTGAGCTGTCCTCTTCGT‑‑GGGCGTCCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa                                 <  2:3790682/134‑1 (MQ=255)

                                                                                               cGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa                                 <  2:11365509/137‑1 (MQ=255)

                                                                                               cGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa                                 <  2:12870483/137‑1 (MQ=255)

                                                                                                      ccGAAACTTGTTGAAGCCGGTGTGGGGGAGGGCATGCCTGGGAAC‑GGTCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGTCTCTTCGT‑‑GGGCGTGCCCGCTCCCAAAGGTTTCGTGGTTGGCTCGCAAGGGCATTcc                        <  1:18685468/137‑1 (MQ=255)

                                                                                                        gAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGTCCACGAAC‑GGGACTTGTCTT‑CTGGGCTCTATTGTTGAGGCAGCCTCTTTTC‑‑TGGCATGCCCCCTCCCCCAAGTTTTTTTGTTGGTTCTCCAGGGAATTcccc                      >  2:1152096/1‑135 (MQ=255)

                                                                                                        gAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAC‑GGgcctggcctg                                                                                                           <  2:10157343/55‑1 (MQ=255)

                                                                                                           gcTTGCGGAAGCCTGTGGGGGAGAGGGCGTGCCCGCGAAC‑GGGCCGGGTCTG‑CGGACCTCGAGGGCGGAGCCGGCCTCTTCGT‑‑GGGCGTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATcc                   <  2:14147267/136‑1 (MQ=255)

                                                                                                             ttcccGAAGCCGGTGGGGGAGAGGGCATGCCTGGGAAT‑GGGCTTGGCTTG‑CGGATCTCTATTGTTGAGCCGTCCTCTTCGG‑‑GGACATTCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCg                 <  2:6827438/134‑1 (MQ=255)

                                                                                                             ttGCCGAATCCGGTGGGGGAGCGGGCGTGCCCGTAAAT‑GGGTCTGGCTTG‑CTGGTCTCTAGGGCGGAGCTGTCCTCTTCGC‑‑GGGTATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCg                 <  2:18678070/137‑1 (MQ=255)

CCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCAGGCATGCCCGCGAAC‑GGGCCTGGCCTG‑CTGATCTCTATGGCTGAGCCGGCCTCTTCGC‑‑GGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGC  >  AE015451_phaM1/499072‑499332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`