| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 2,586,629 | 39194 bp→CCATTT | PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type)–[PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] | 42 genes PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type), PP_5507 CDS (protein of unknown function), PP_2267 CDS (putative Phage single‑stranded DNA‑binding protein), PP_2268 CDS (Phage endodeoxyribonuclease I), PP_2269 CDS (putative N‑acetylmuramoyl‑L‑alanine amidase), PP_2270 CDS (putative DNA primase_helicase protein), PP_5508 CDS (conserved protein of unknown function), PP_5509 CDS (conserved exported protein of unknown function), PP_5510 CDS (protein of unknown function), PP_2272 CDS (conserved protein of unknown function), PP_5511 CDS (protein of unknown function), PP_2273 CDS (DNA polymerase I from phage origin), PP_2274 CDS (conserved protein of unknown function), PP_2275 CDS (conserved protein of unknown function), PP_2276 CDS (putative phage exonuclease), PP_2277 CDS (conserved protein of unknown function), PP_2278 CDS (conserved protein of unknown function), PP_5512 CDS (protein of unknown function), PP_2279 CDS (Head‑to‑tail joining protein), PP_2280 CDS (conserved protein of unknown function), PP_2281 CDS (putative Capsid assembly protein), PP_5513 CDS (conserved protein of unknown function of phage origin), PP_2282 CDS (Minor capsid protein 10), PP_2283 CDS (Tail tubular protein A), PP_2284 CDS (Tail tubular protein B), PP_5514 CDS (conserved protein of unknown function), PP_2285 CDS (conserved exported protein of unknown function), PP_2286 CDS (conserved protein of unknown function), PP_2287 CDS (Phage internal core protein), PP_2288 CDS (Phage tail fiber protein), PP_2289 CDS (conserved exported protein of unknown function), PP_2290 CDS (conserved protein of unknown function), PP_2291 CDS (conserved protein of unknown function), PP_2292 CDS (conserved protein of unknown function), PP_2293 CDS (DNA maturase B), PP_2294 CDS (conserved exported protein of unknown function), PP_5515 CDS (protein of unknown function), PP_5516 CDS (protein of unknown function), PP_5517 CDS (conserved exported protein of unknown function), PP_2295 CDS (putative antirestriction protein), PP_2296 CDS (conserved protein of unknown function), [PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 2586629 | 2625822 | 39194 | 823 [0] | [0] 935 | PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type)–[PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] | PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type),PP_5507 CDS (protein of unknown function),PP_2267 CDS (putative Phage single‑stranded DNA‑binding protein),PP_2268 CDS (Phage endodeoxyribonuclease I),PP_2269 CDS (putative N‑acetylmuramoyl‑L‑alanine amidase),PP_2270 CDS (putative DNA primase_helicase protein),PP_5508 CDS (conserved protein of unknown function),PP_5509 CDS (conserved exported protein of unknown function),PP_5510 CDS (protein of unknown function),PP_2272 CDS (conserved protein of unknown function),PP_5511 CDS (protein of unknown function),PP_2273 CDS (DNA polymerase I from phage origin),PP_2274 CDS (conserved protein of unknown function),PP_2275 CDS (conserved protein of unknown function),PP_2276 CDS (putative phage exonuclease),PP_2277 CDS (conserved protein of unknown function),PP_2278 CDS (conserved protein of unknown function),PP_5512 CDS (protein of unknown function),PP_2279 CDS (Head‑to‑tail joining protein),PP_2280 CDS (conserved protein of unknown function),PP_2281 CDS (putative Capsid assembly protein),PP_5513 CDS (conserved protein of unknown function of phage origin),PP_2282 CDS (Minor capsid protein 10),PP_2283 CDS (Tail tubular protein A),PP_2284 CDS (Tail tubular protein B),PP_5514 CDS (conserved protein of unknown function),PP_2285 CDS (conserved exported protein of unknown function),PP_2286 CDS (conserved protein of unknown function),PP_2287 CDS (Phage internal core protein),PP_2288 CDS (Phage tail fiber protein),PP_2289 CDS (conserved exported protein of unknown function),PP_2290 CDS (conserved protein of unknown function),PP_2291 CDS (conserved protein of unknown function),PP_2292 CDS (conserved protein of unknown function),PP_2293 CDS (DNA maturase B),PP_2294 CDS (conserved exported protein of unknown function),PP_5515 CDS (protein of unknown function),PP_5516 CDS (protein of unknown function),PP_5517 CDS (conserved exported protein of unknown function),PP_2295 CDS (putative antirestriction protein),PP_2296 CDS (conserved protein of unknown function),[PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 2586628 | 0 (0.000) | 815 (1.130) +CCATTT |
116/258 | 0.2 | 100% | intergenic (+534/‑8) | PP_t39 tRNA (tRNA‑Leu)/PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type) | –/– |
| ? | AE015451_phaM1 | 2625823 = | 0 (0.000) | intergenic (+1/‑299) | PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)/PP_t40 tRNA (tRNA‑His) | –/– | |||||
Only 100 of 845 total aligned reads displayed.
CGGGGCCGCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/2586493‑2586628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTGT > AE015451_phaM1/2625823‑2625958 |||||| GGGGCCGCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCC > 1:1845987/1‑137 GCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTT > 1:4360535/1‑137 CGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTG < 1:10958823/137‑1 CAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTATCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGA > 2:12429618/1‑137 CAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGA > 1:2579742/1‑137 CAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGA > 1:12861902/1‑137 CAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGA > 1:13723769/1‑137 GAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGAT > 2:4098932/1‑137 GACCACATCCAGAGTCGCGGCCCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGCCATCCTTAGAAATGATTACTTAGTGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGCTTC > 1:7327176/1‑137 GACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTC > 1:7866620/1‑137 ATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCT > 2:8248833/1‑137 ATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCT > 2:6953075/1‑137 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 2:3402039/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 2:3832522/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 2:5242335/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 2:646487/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:15729124/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:15449775/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:4962420/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 2:7394878/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:6190600/137‑1 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 1:4729104/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 2:2123332/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 2:2988867/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 1:5927644/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 2:11188820/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 1:15991612/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 1:1522618/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG < 1:10745828/137‑1 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCC‑CTTTTGGGACACATTTTCTGATTCGTGGCTCGG > 1:770318/1‑137 GAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGC > 1:2116716/1‑137 TCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGA > 1:5580930/1‑137 CGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTA > 2:7552525/1‑137 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGa > 2:9575012/1‑136 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGC > 2:10574875/1‑137 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGC > 1:8151426/1‑137 CCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCC > 1:14427886/1‑137 AATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAG < 1:9225482/137‑1 ATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGC < 1:6299046/137‑1 ATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGC < 1:6446718/137‑1 ATTGGATTCCTTAGCGATGCCCTCCGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATAATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAATCGGCCCTGAGC > 1:9045709/1‑137 ATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGA < 2:13848635/137‑1 TTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGAC > 2:668315/1‑137 TTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTG < 1:8364333/137‑1 TTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTG < 1:12476967/137‑1 TTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTG < 2:10078688/137‑1 TTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTG < 2:1137117/137‑1 TTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTG < 1:3592233/137‑1 TAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGG < 2:86715/137‑1 AGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGG > 2:3586001/1‑137 AGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGG > 2:1183572/1‑137 CCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCA < 2:14912864/137‑1 CCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCA < 1:10455045/137‑1 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA > 1:9511901/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA > 1:11928453/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA > 2:4222426/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA > 1:6877147/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA > 2:15426509/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGC < 2:807767/115‑1 GAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACG < 1:8782498/137‑1 GAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACG < 1:1721671/137‑1 GATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGG < 1:324848/137‑1 GACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCG < 2:9410336/137‑1 GACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCG < 2:16280925/137‑1 GACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCG < 2:15738013/137‑1 GACCCTTAGAGACATCCTGAGAAATGATTACTTAATGATGAGGACGAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCG < 1:3424291/137‑1 CCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGG > 1:10018906/1‑137 CCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGG < 2:16085478/137‑1 CTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGAC > 2:1025018/1‑137 CTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGAC > 2:13920435/1‑137 TTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACA < 2:15136178/137‑1 TTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACA > 2:14777089/1‑137 TTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGACAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACA < 2:14418298/137‑1 TAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACAC < 2:1661712/137‑1 GAGACATCCTTAGAAATGATTACTTAATAATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACAC < 2:9053993/137‑1 AGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACC > 2:7840246/1‑137 GACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCG < 2:2464906/137‑1 GACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCG < 1:2837285/137‑1 GACATCCTTAGAAATGATTACTGAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCG < 2:12740524/137‑1 CATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGG < 1:1398112/137‑1 CTTAGAAATGATTACTTAATGATGATTACTCAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCATGGGCCCACCCAAAACGGGGCGGGACACACCGGGACAa > 2:12090329/1‑136 TAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACAT < 2:14282280/137‑1 GAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGG > 2:2776072/1‑137 TTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACT < 2:6150904/137‑1 TTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACT < 2:5729929/137‑1 CTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGG < 2:4644633/137‑1 ATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGA < 1:6665182/137‑1 ATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGA < 2:14598454/137‑1 GATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAAT < 1:11705261/137‑1 TTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTT < 1:16420925/137‑1 TACTAAGAGATCCCTTTTTGTGACACATTTTCTTATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTA < 2:13093444/137‑1 ACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAG > 2:13602492/1‑137 ACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAG > 1:5162500/1‑137 CTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGa > 1:16703026/1‑136 CTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGC > 2:10951559/1‑137 AGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTT < 1:13352953/137‑1 AGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTT < 1:2235010/137‑1 AGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTT < 1:11416411/137‑1 AGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTT < 2:1807799/137‑1 TTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTG < 1:14771063/137‑1 |||||| CGGGGCCGCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/2586493‑2586628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTGT > AE015451_phaM1/2625823‑2625958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |