| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,366,695 | Δ15,777 bp | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | 20 genes [PP_2964 CDS (putative transposase)], tnpC CDS (putative tnpA repressor TnpC), PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity), csoR CDS (putative repressor of copper utilisation proteins), PP_2970 CDS (conserved exported protein of unknown function), PP_2971 CDS (transposase), PP_2972 CDS (conserved protein of unknown function), dgkA‑II CDS (diacylglycerol kinase), PP_2974 CDS (putative sulfatase), PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3), PP_2976 CDS (putative transposase), PP_mr38 ncRNA (ALIL regulatory region), tnpB CDS (Tn4652_ transposase subunit B), PP_2978 CDS (conserved protein of unknown function), PP_2979 CDS (conserved protein of unknown function), PP_2980 CDS (conserved protein of unknown function), tnpS CDS (putative cointegrate resolution protein S), tnpT‑I CDS (putative cointegrate resolution protein T Tn4652), PP_2983 CDS (conserved protein of unknown function), [PP_2984 CDS (conserved protein of unknown function)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3366695 | 3382471 | 15777 | 758 [0] | [0] 751 | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | [PP_2964 CDS (putative transposase)],tnpC CDS (putative tnpA repressor TnpC),PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity),csoR CDS (putative repressor of copper utilisation proteins),PP_2970 CDS (conserved exported protein of unknown function),PP_2971 CDS (transposase),PP_2972 CDS (conserved protein of unknown function),dgkA‑II CDS (diacylglycerol kinase),PP_2974 CDS (putative sulfatase),PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3),PP_2976 CDS (putative transposase),PP_mr38 ncRNA (ALIL regulatory region),tnpB CDS (Tn4652_ transposase subunit B),PP_2978 CDS (conserved protein of unknown function),PP_2979 CDS (conserved protein of unknown function),PP_2980 CDS (conserved protein of unknown function),tnpS CDS (putative cointegrate resolution protein S),tnpT‑I CDS (putative cointegrate resolution protein T Tn4652),PP_2983 CDS (conserved protein of unknown function),[PP_2984 CDS (conserved protein of unknown function)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3366694 | 0 (0.000) | 745 (0.990) | 119/268 | 0.3 | 100% | intergenic (+360/‑1) | PP_2962 CDS (Alcohol dehydrogenase_ zinc‑containing)/PP_2964 CDS (putative transposase) | –/– |
| ? | AE015451_phaM1 | 3382472 = | 0 (0.000) | intergenic (+1/‑28) | PP_2984 CDS (conserved protein of unknown function)/PP_5545 CDS (protein of unknown function) | –/– | |||||
Only 100 of 758 total aligned reads displayed.
TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG > 1:11580806/1‑137TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 1:9744096/137‑1 ATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGC > 1:6106954/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:9246432/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:1504169/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:5831687/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:101526/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:11276705/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:1708121/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:3641947/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:10862461/1‑137 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA < 1:7907095/137‑1 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 1:6932071/1‑137 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 2:3751453/1‑137 AGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACG > 2:2693885/1‑137 AAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCCGCAGGGCACGGCAA > 1:7776070/1‑137 AAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAA > 1:16374344/1‑137 AATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAAT < 1:10289463/137‑1 ATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 2:2927938/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:2133877/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:14271063/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 1:755654/137‑1 TCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAAT < 1:12074150/137‑1 TCGTTCTGTAAACATATGATGTAAAAGGTTATGCGAGAGGCCGTGGCTTGCTGGTCATCCACCGGCTGGCTAGCCGTCTATGCGGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAAT < 2:16555130/137‑1 TTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAC < 2:13896614/137‑1 TTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAC > 1:6426659/1‑137 TCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACC < 1:1734078/137‑1 TCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAAGGACC < 1:1387073/137‑1 CTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCA < 1:15523535/137‑1 TAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGTTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACT < 2:13179480/137‑1 TAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACT < 1:3435042/137‑1 TGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAAT > 1:15956203/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAACTGGACTCGGAATGACCAACTCAACAAATGACGA > 2:12600165/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 2:7038699/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 2:5299745/1‑137 TTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGA < 2:15189509/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:3219774/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:6567024/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:552118/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:4670721/137‑1 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 2:836805/1‑137 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 1:13680884/1‑137 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 2:558946/1‑137 CCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTA > 2:8156309/1‑137 GTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAAC < 2:1171105/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 1:1980950/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 2:5081500/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 1:4124364/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 2:10642827/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCATCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 2:7508049/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:12782222/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:15773590/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:8809421/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:7289017/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 1:10018578/88‑1 CTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGG < 1:13435679/137‑1 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 1:8474852/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 2:5895600/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT < 1:9470061/137‑1 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:281547/1‑137 GTCATCCACCGCCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT < 2:6824864/137‑1 CCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCT < 1:5232914/137‑1 GTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGT > 1:10628851/1‑137 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:2405346/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 2:3322432/137‑1 cGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCGACTCAACAAATGACGACCGACGATTCGCCGATCTAACACGCGAGGCATTAGCTGACGTGAG > 2:15965306/2‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 2:10418678/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 2:11000356/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:4531390/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTCGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGACTGACCAACTCAACAGATGACGACCGACGATTCGCTGATCTAACACGCGAGGCATTCGATGACGTGAG > 2:12259991/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGCCCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:1612874/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:8875839/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:6596117/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:8693547/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:15772872/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:14057603/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:2637342/1‑137 CTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGC > 2:14553212/1‑137 AGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGG > 2:1076830/1‑137 GTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTT > 1:11718568/1‑137 GTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTT > 2:4763918/1‑137 TCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:12659647/1‑105 TCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:4221001/105‑1 TCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:4221001/1‑105 CTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGG > 2:8961009/1‑137 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 1:131647/137‑1 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 1:15330366/137‑1 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 2:7945228/137‑1 CTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATT < 1:2993533/137‑1 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC > 1:14404703/1‑137 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC < 1:3710136/137‑1 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC < 1:16602076/137‑1 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC > 2:14666172/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG > 1:7368252/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG < 2:9585623/137‑1 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 2:11496533/1‑137 TGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGA < 1:14748023/137‑1 TGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGA < 2:4389035/137‑1 GGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGAT < 2:14974447/137‑1 GCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG < 2:1349661/137‑1 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |