| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,412,992 | Δ35,612 bp | [PP_3026 CDS (putative Phage recombinase)]–PP_5557 CDS (protein of unknown function) | 47 genes [PP_3026 CDS (putative Phage recombinase)], PP_3027 CDS (conserved protein of unknown function), PP_3028 CDS (conserved protein of unknown function), PP_3029 CDS (DNA cytosine methyltransferase family protein), PP_3030 CDS (conserved exported protein of unknown function), prtN CDS (Transcription regulatory protein PrtN), PP_3032 CDS (DNA‑binding protein Roi‑related protein), PP_5552 CDS (conserved protein of unknown function), PP_5553 CDS (conserved protein of unknown function), PP_3033 CDS (putative transcriptional repressor_ CI_C2 family), PP_3034 CDS (putative Regulator protein), PP_3035 CDS (conserved protein of unknown function), PP_5554 CDS (protein of unknown function), PP_3036 CDS (conserved protein of unknown function), PP_5555 CDS (conserved protein of unknown function), PP_3037 CDS (C4‑type zinc finger protein_ DksA_TraR family), PP_3038 CDS (Pyocin R2_PP_ traC domain protein), PP_3039 CDS (conserved protein of unknown function), PP_3040 CDS (Pyocin R2_PP_ holin), PP_3041 CDS (conserved protein of unknown function), PP_3042 CDS (putative Terminase_ large subunit), PP_3043 CDS (conserved protein of unknown function), PP_3044 CDS (Phage portal protein_ lambda family), PP_3045 CDS (putative ClpP protease), PP_3046 CDS (conserved protein of unknown function), PP_3047 CDS (conserved protein of unknown function), PP_3048 CDS (conserved protein of unknown function), PP_3049 CDS (conserved protein of unknown function), PP_3050 CDS (conserved protein of unknown function), gpV CDS (Pyocin R2_PP_ tail spike protein), PP_3052 CDS (conserved protein of unknown function), gpW CDS (Pyocin R2_PP_ baseplate protein), gpJ CDS (Pyocin R2_PP_ baseplate_tail fiber protein), gpI CDS (Pyocin R2_PP_ tail formation protein), PP_3056 CDS (putative Pyocin R2_PP_ tail fiber protein), PP_3057 CDS (putative pectinesterase), PP_3058 CDS (conserved protein of unknown function), PP_3059 CDS (putative tail sheath protein), PP_3060 CDS (putative tail sheath protein), PP_3061 CDS (conserved protein of unknown function), PP_3062 CDS (putative Pyocin R2_PP_ tail length determination protein), gpU CDS (Pyocin R2_PP_ tail formation protein), PP_3064 CDS (Phage tail protein), gpD CDS (Pyocin R2_PP_ tail formation), PP_3066 CDS (Pyocin R2_PP_ lytic enzyme), PP_5556 CDS (putative bacteriophage lysis protein), PP_5557 CDS (protein of unknown function) |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3412992 | 3448603 | 35612 | 982 [0] | [0] 983 | [PP_3026 CDS (putative Phage recombinase)]–PP_5557 CDS (protein of unknown function) | [PP_3026 CDS (putative Phage recombinase)],PP_3027 CDS (conserved protein of unknown function),PP_3028 CDS (conserved protein of unknown function),PP_3029 CDS (DNA cytosine methyltransferase family protein),PP_3030 CDS (conserved exported protein of unknown function),prtN CDS (Transcription regulatory protein PrtN),PP_3032 CDS (DNA‑binding protein Roi‑related protein),PP_5552 CDS (conserved protein of unknown function),PP_5553 CDS (conserved protein of unknown function),PP_3033 CDS (putative transcriptional repressor_ CI_C2 family),PP_3034 CDS (putative Regulator protein),PP_3035 CDS (conserved protein of unknown function),PP_5554 CDS (protein of unknown function),PP_3036 CDS (conserved protein of unknown function),PP_5555 CDS (conserved protein of unknown function),PP_3037 CDS (C4‑type zinc finger protein_ DksA_TraR family),PP_3038 CDS (Pyocin R2_PP_ traC domain protein),PP_3039 CDS (conserved protein of unknown function),PP_3040 CDS (Pyocin R2_PP_ holin),PP_3041 CDS (conserved protein of unknown function),PP_3042 CDS (putative Terminase_ large subunit),PP_3043 CDS (conserved protein of unknown function),PP_3044 CDS (Phage portal protein_ lambda family),PP_3045 CDS (putative ClpP protease),PP_3046 CDS (conserved protein of unknown function),PP_3047 CDS (conserved protein of unknown function),PP_3048 CDS (conserved protein of unknown function),PP_3049 CDS (conserved protein of unknown function),PP_3050 CDS (conserved protein of unknown function),gpV CDS (Pyocin R2_PP_ tail spike protein),PP_3052 CDS (conserved protein of unknown function),gpW CDS (Pyocin R2_PP_ baseplate protein),gpJ CDS (Pyocin R2_PP_ baseplate_tail fiber protein),gpI CDS (Pyocin R2_PP_ tail formation protein),PP_3056 CDS (putative Pyocin R2_PP_ tail fiber protein),PP_3057 CDS (putative pectinesterase),PP_3058 CDS (conserved protein of unknown function),PP_3059 CDS (putative tail sheath protein),PP_3060 CDS (putative tail sheath protein),PP_3061 CDS (conserved protein of unknown function),PP_3062 CDS (putative Pyocin R2_PP_ tail length determination protein),gpU CDS (Pyocin R2_PP_ tail formation protein),PP_3064 CDS (Phage tail protein),gpD CDS (Pyocin R2_PP_ tail formation),PP_3066 CDS (Pyocin R2_PP_ lytic enzyme),PP_5556 CDS (putative bacteriophage lysis protein),PP_5557 CDS (protein of unknown function) |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3412991 | 0 (0.000) | 963 (1.310) | 139/262 | 0.0 | 100% | coding (1/1626 nt) | PP_3026 CDS (putative Phage recombinase) | |
| ? | AE015451_phaM1 | 3448604 = | 0 (0.000) | intergenic (‑472/‑199) | PP_5557 CDS (protein of unknown function)/PP_3067 CDS (conserved protein of unknown function) | –/– | |||||
Only 100 of 984 total aligned reads displayed.
TCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3412854‑3412991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaCGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGGGGC > AE015451_phaM1/3448604‑3448739 CCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTA > 2:14281978/1‑137 CAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTAC < 2:16852134/137‑1 CAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTAC < 2:15557774/137‑1 TCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGC < 1:15143866/137‑1 TCATCATTGATGATGTCGTTTGGATTTTCAAGCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGC < 2:772129/137‑1 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 1:4954625/1‑137 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 2:6724668/1‑137 TTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCGGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGT < 2:3058542/137‑1 ATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGT < 2:1860912/137‑1 ATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGT < 2:5219918/137‑1 TGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTT < 1:8076156/137‑1 GATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTG < 2:8202973/137‑1 ATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGG < 1:1482455/137‑1 TGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGG > 1:5352147/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:5893110/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA < 1:12178692/137‑1 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 1:14460794/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:5695335/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA < 1:8446134/137‑1 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:2416586/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 1:3172509/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 1:11758444/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:10258136/1‑137 TGGATTTTCAATCCCCAGGCAGCTCGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGACAG > 2:12557334/1‑137 TGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAG < 2:13951022/137‑1 GATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAG > 1:351215/1‑137 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 2:11904196/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 2:14455673/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 1:11075470/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 1:13679513/137‑1 CAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTG < 1:13373357/137‑1 CAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTG < 1:7500917/137‑1 CAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTG < 1:10003064/137‑1 AATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGG > 2:9155688/1‑137 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 2:3519559/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:14044234/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:11273215/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:16588207/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:2860516/137‑1 CAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGA < 1:7153843/137‑1 AGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGT < 1:8757368/137‑1 AGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGACTGATAGAGGAGGTGGTACGGAGCTGT > 1:4547137/1‑137 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 1:16800113/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 1:12402162/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 1:15617354/137‑1 CTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGG < 2:7085023/137‑1 AGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGC < 1:13520456/137‑1 GGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCA > 1:10164032/1‑137 GCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCAT < 1:6812490/137‑1 GCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCAT > 1:2000887/1‑137 GCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCAT > 1:5612923/1‑137 GCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGG > 2:14675709/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 1:16247787/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 1:14271493/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 2:4325518/1‑137 TCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGAT < 2:10508443/137‑1 TCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGAT > 2:7529154/1‑137 ATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGC > 2:1355447/1‑137 ATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGC > 1:648570/1‑137 GGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAA > 1:11474926/1‑137 GGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAA > 2:13407981/1‑137 CGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAA > 2:2717534/1‑137 TGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAAT < 1:2632693/137‑1 GGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCAT < 1:9126588/137‑1 GGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCAT < 1:12938387/137‑1 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 2:897125/1‑137 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 1:9942738/1‑137 AATATATACTCTGGCTTTCCAGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 2:13108306/1‑137 TATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCT < 2:10705715/137‑1 TCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGA < 1:5911469/137‑1 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:9547749/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:6336376/1‑137 TGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGC > 1:1063774/1‑137 TGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCAGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGC > 2:16479954/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 2:2223961/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 2:11592536/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 1:6331162/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 2:12188373/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 2:4739770/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 2:7828889/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 1:2357460/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 2:7364312/1‑137 TTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTC > 2:3226375/1‑137 TTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTC > 1:15404130/1‑137 TTCCCGGTTGGAGTGAAATCGGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:8565741/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGGGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:15822504/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:16086515/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 1:12629711/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCATTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:6548371/1‑137 TTCCAGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 1:4258315/1‑137 CGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTT < 2:15297811/137‑1 GGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTG > 1:4798512/1‑137 GGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTG > 2:3955464/1‑137 AATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAA < 1:3867155/137‑1 CAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGA < 2:1111061/137‑1 GGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACG < 1:7299110/137‑1 GGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACG < 2:11441798/137‑1 GGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACG < 1:11939162/137‑1 GGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGG < 1:7747919/137‑1 GGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGG < 1:9552717/137‑1 TCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3412854‑3412991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaCGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGGGGC > AE015451_phaM1/3448604‑3448739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |