| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 2,178,568 | 0 | G | A | 29.3% | 2028.9 / inf | 1082 | T268T (ACG→ACA) | PP_1931 CDS (conserved protein of unknown function) | |
| Reads supporting (aligned to +/- strand): ref base G (610/132); new base A (2/306); total (612/470) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1087 total aligned reads displayed.
CAGACAAACAAATCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCATGTGAGCAAGCTG > AE015451_phaM1/2178432‑2178704 | aGACAAACAAATCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGa < 2:4213419/137‑1 (MQ=255) acaaacaaATCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAAt > 2:5808898/1‑137 (MQ=255) acaaacaaATCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAAt > 2:12260108/1‑137 (MQ=255) acaaacaaATCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAAt > 1:7542391/1‑137 (MQ=255) caaacaaaTCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATg > 1:2022251/1‑137 (MQ=255) caaacaaaTCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATg > 1:4337539/1‑137 (MQ=255) caaacaaaTCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATg > 2:14187463/1‑137 (MQ=255) aTCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCa > 1:5622732/1‑137 (MQ=255) aTCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCa > 1:989903/1‑137 (MQ=255) tctcACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATGTCGGTCATGATc < 2:16838551/137‑1 (MQ=255) cacaGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACTGCCGTTGACGATCAGCACCATCTGATTATTGCGCATGAAGTGACGAACTTCGGTCATGATcgcg < 2:7191042/137‑1 (MQ=255) cacaGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATcgcg > 1:3450851/1‑137 (MQ=255) cacaGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATcgcg > 2:10355288/1‑137 (MQ=255) caGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAATGACAAATGTCGGTCATGATCGCGGc < 2:10826700/137‑1 (MQ=255) cccGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAACTGACAAACATCGGTCATGATCGCGGCCAGtt < 1:12395143/137‑1 (MQ=255) gATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAg > 2:14741040/1‑137 (MQ=255) gATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAg > 1:2674869/1‑137 (MQ=255) gATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAg > 1:6186030/1‑137 (MQ=255) aTGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAACCTCGGTCATGATCGCGGCCAGTTGAGc < 1:8923812/137‑1 (MQ=255) aTGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAACCTCGGTCATGATCGCGGCCAGTTGAGc < 1:1394347/137‑1 (MQ=255) tGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCa > 2:2692976/1‑137 (MQ=255) cccGCTCCATGTCAGTTGGCGGTCGGGGCCGTGGCACCGTTAGCTATAACGTACAAACGGCCGCTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAAc > 2:2380645/1‑137 (MQ=255) cccGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAAc > 1:9498208/1‑137 (MQ=255) cccGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAAc > 1:3960314/1‑137 (MQ=255) cccGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAAc > 2:3651708/1‑137 (MQ=255) ccGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACa < 1:14923559/137‑1 (MQ=255) cGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACAt > 2:3288750/1‑137 (MQ=255) cGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACAt > 2:12429036/1‑137 (MQ=255) gCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAATTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATg < 2:5998140/137‑1 (MQ=255) ccATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCg > 2:4621334/1‑137 (MQ=255) ccATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCg > 1:10884636/1‑137 (MQ=255) cATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGa > 2:6729249/1‑137 (MQ=255) cAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGaagcaa > 1:13190476/1‑137 (MQ=255) cAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGaagcaa > 1:10580871/1‑137 (MQ=255) aGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGaagcaag > 1:14297566/1‑137 (MQ=255) tGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAgcgc < 1:2942840/137‑1 (MQ=255) gCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGt > 1:16051878/1‑137 (MQ=255) gCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGt > 1:9270663/1‑137 (MQ=255) gCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGt > 2:6333659/1‑137 (MQ=255) gCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGt > 1:479544/1‑137 (MQ=255) gCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGt > 2:15772808/1‑137 (MQ=255) gCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGCGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGt < 2:12899994/137‑1 (MQ=255) ggTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGa > 1:7111158/1‑137 (MQ=255) ggTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGa < 1:13614063/137‑1 (MQ=255) cGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCa < 2:2020462/137‑1 (MQ=255) cGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCa < 1:1341776/137‑1 (MQ=255) cGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATATCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCa < 1:2219367/137‑1 (MQ=255) cAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAACTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCg < 2:563260/137‑1 (MQ=255) cACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTg > 2:11898049/1‑137 (MQ=255) ttGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCg > 1:59436/1‑137 (MQ=255) ttGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCg > 1:13027882/1‑137 (MQ=255) tGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAATGACAAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGc < 1:10000570/137‑1 (MQ=255) gCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTg > 2:4988752/1‑137 (MQ=255) tataACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGAc < 2:15097412/137‑1 (MQ=255) gTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGt > 2:16679809/1‑137 (MQ=255) caCGGCCGTTGACGATCAGCACCATCTGATCGTTGCGCATGAAGTGACGCATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCg > 1:16517727/2‑137 (MQ=255) aaCGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCg > 2:15427729/1‑137 (MQ=255) aaCGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCg > 2:13454553/1‑137 (MQ=255) aaCGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACCAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCg < 2:9128201/137‑1 (MQ=255) cGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAATTGACAAATGTCGGTCATGATCGTGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGAc < 2:7522257/137‑1 (MQ=255) cGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACCAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGAc < 2:11626768/137‑1 (MQ=255) cGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGAc < 2:9630226/137‑1 (MQ=255) cGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAACTTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGAc < 1:15712284/137‑1 (MQ=255) cGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGAc < 2:15957599/137‑1 (MQ=255) cGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGCGACAAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGAc < 2:14500527/137‑1 (MQ=255) gCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCAGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCg > 2:800215/1‑137 (MQ=255) gCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATATCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCg < 1:10259352/137‑1 (MQ=255) gCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATATCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCg < 1:6805929/137‑1 (MQ=255) ccGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCgg < 1:3679118/137‑1 (MQ=255) cGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCggg < 1:14773833/137‑1 (MQ=255) ttGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGc > 1:15472520/1‑137 (MQ=255) cGATCAGCACCATCTGAGCATTGCGCATGAAGTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTAtt < 2:3050332/137‑1 (MQ=255) cGACCAGCACCATCTGATCATCGCGCACGAAATGACAACTTTCGATCATGATCGCGGCCAGTTAAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCCAtt < 2:13941884/137‑1 (MQ=255) gCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGNCGTTGCCGACCGGGGCTATTACACAg > 1:16674144/1‑137 (MQ=255) cATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCAc > 2:8449479/1‑137 (MQ=255) cATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCAc > 1:12616789/1‑137 (MQ=255) aTCTGATCATTGCGCATGAATTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCAcc < 2:16153127/137‑1 (MQ=255) tGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGaa > 1:2364519/1‑137 (MQ=255) gATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGaaa > 1:11671044/1‑137 (MQ=255) gATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGaaa > 1:7765067/1‑137 (MQ=255) aTCATTGCGCATGAATCGACAAATTTCAGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAAt < 1:11174926/137‑1 (MQ=255) aTCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAAt < 1:3207101/137‑1 (MQ=255) aTCATTGCGCATGAAGTGACGAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAAt < 1:6526793/137‑1 (MQ=255) aTCATTGCGCATGAAGTGACAAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAAt < 1:5264315/137‑1 (MQ=255) cATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCg < 2:10136286/137‑1 (MQ=255) aTTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGt > 2:7761377/1‑137 (MQ=255) gcATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAt > 1:7204028/1‑137 (MQ=255) cATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtg > 1:14493175/1‑137 (MQ=255) aTGAATTGACAAACCTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt < 1:8418598/137‑1 (MQ=255) aTGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt < 1:1742757/137‑1 (MQ=255) aTGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt < 2:387155/137‑1 (MQ=255) aTGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt > 2:16385743/1‑137 (MQ=255) aTGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt > 1:13795739/1‑137 (MQ=255) aTGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt < 1:5048821/137‑1 (MQ=255) aTGAAGTGACAAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt < 2:8756416/137‑1 (MQ=255) aTGAACTGACAAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgt < 2:5205800/137‑1 (MQ=255) tGAATTGACAAACCTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCAtgtg < 1:11998875/137‑1 (MQ=255) aaGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCATGTGAg > 1:7970985/1‑137 (MQ=255) gACGAACGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCATGTGAGCAAg < 2:11215253/137‑1 (MQ=255) aaCGAATGTCGGTCATGATCGCGGCCAGTTGAGCAGCATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCATGTGAGCAAg < 2:9427977/136‑1 (MQ=255) | CAGACAAACAAATCTCTCTCACAGATCCCGATGCCCGCTCCATGTCAGTTGGCGGTCGGGGCAGTGGCACCGTTGGCTATAACGTACAAACGGCCGTTGACGATCAGCACCATCTGATCATTGCGCATGAAGTGACGAATGTCGGTCATGATCGCGGCCAGTTGAGCAACATGGCGAAGCAAGCGCGTGACCAAATCGGTGCTGAATCGCTGACGGTCGTTGCCGACCGGGGCTATTACACAGGCACCGAAATCGTTGCATGTGAGCAAGCTG > AE015451_phaM1/2178432‑2178704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |