BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AE015451_phaM1	4,344,312	0	G	A	45.8%	44.8 / 23.0	93	intergenic (+43/‑113)	PP_3817 CDS (Polyamine ABC transporter_ ATP‑binding protein)/PP_3818 CDS (Periplamic phosphate‑binding protein)	–/–
Reads supporting (aligned to +/- strand): ref base G (39/6); new base A (38/0); total (87/6)
Fisher's exact test for biased strand distribution p-value = 2.89e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 161 total aligned reads displayed.

CGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTG  >  AE015451_phaM1/4344176‑4344448

cGACAGCGTGACTGTGCGTTTTGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCGGAGCAAGTCGGCCGGGGCGCATTAACGCCCTTGTACGTTGCAGC‑GCCTGTCAGATCGAGCAccgcccg                                                                                                                                          <  2:102996/137‑1 (MQ=255)

cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  1:2862278/137‑1 (MQ=255)

cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  2:12405634/137‑1 (MQ=255)

cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  2:103035/137‑1 (MQ=255)

cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  2:10107863/137‑1 (MQ=255)

   cAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCcgcgc                                                                                                                                       <  1:11965862/137‑1 (MQ=255)

    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  1:15701462/137‑1 (MQ=255)

    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  2:6189223/137‑1 (MQ=255)

    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  2:5704930/137‑1 (MQ=255)

    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  2:13458372/137‑1 (MQ=255)

    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  1:12856614/137‑1 (MQ=255)

     gCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGCgg                                                                                                                                     <  2:13249262/137‑1 (MQ=255)

     gCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGACCGAGCACCACCCGCGCgg                                                                                                                                     >  2:11811421/1‑137 (MQ=255)

        tGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGGCCGAGCACCACCCGCGCGGcac                                                                                                                                  >  2:11612435/1‑137 (MQ=255)

        tGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGCGGcac                                                                                                                                  <  1:15489644/137‑1 (MQ=255)

         gcaGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAAATCGAGCCCCGCCCGCGCGGaaca                                                                                                                                 >  2:14202575/3‑137 (MQ=255)

          aaGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGCGGCacac                                                                                                                                <  2:6478183/137‑1 (MQ=255)

            ggTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GACCGCCAGATCGAACCCCACCCACGCGGAACAAGa                                                                                                                              >  2:9544218/1‑137 (MQ=255)

            ggTGCGTTGGACAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCCGATTGAGCACCGCCCGCGCGGAACACGa                                                                                                                              >  2:8188591/1‑137 (MQ=255)

            ggTGCGTTGGACAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGTGGACCACGa                                                                                                                              >  2:8188590/1‑137 (MQ=255)

                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GTATGCCCGATTGAGCACCACCCACGCAGAACACGACCTGGCa                                                                                                                       >  1:8730356/1‑137 (MQ=255)

                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTTCCAAATCGAACACCACCCACTCAGCACACGATcctgcc                                                                                                                       >  1:14790331/1‑132 (MQ=255)

                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCTAGCACCGCCCACGCGGAACACAACCCGGCa                                                                                                                       >  2:15574023/1‑137 (MQ=255)

                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCCCCCAACCGAACACCACCCACGCAGCACACAATccgtca                                                                                                                       >  1:8628076/1‑132 (MQ=255)

                     ggCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAga                                                                                                                     >  1:10129472/1‑136 (MQ=255)

                       cAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTTTCCAG‑CCCAGAACCCCCCGCGCAGCACAAAACCTGGCaagag                                                                                                                   >  1:14180040/1‑133 (MQ=255)

                          tGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTTCCAGATCGAACACCGCCCACGCGGGACACGATTTGGCAAGAGCTg                                                                                                                >  2:6621457/1‑137 (MQ=255)

                          tGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCCAATCGAGCACCGCCCGCGCGGCACACGGTCTGGCAGGCGGTg                                                                                                                >  2:2786720/1‑137 (MQ=255)

                          tGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGACCGCGCACCGCCCGCGCGGCACACGATCTGGTCGGAGCTg                                                                                                                >  2:14836394/1‑137 (MQ=255)

                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGTGAACTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGT‑GCCTTCCAAATCGAGTACCGGCCGTGCGGGACACGATCTTGCAGGTGCTgtaa                                                                                                             >  2:6087407/1‑134 (MQ=255)

                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GGCTGTCCGAGCGAACACCACCCACGCTGCACACAACCTGGCAAGAGATGCAc                                                                                                             >  1:6297596/1‑137 (MQ=255)

                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GGCTGTCCAACCTAGCACCCCCCACGCAGCACACCATCTTGCAGGCGCTGTAc                                                                                                             >  2:14068998/1‑137 (MQ=255)

                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCCGGTCGAGCACCGCCCACTCGGGACAAGATCTGGCAGGAGATGCAc                                                                                                             >  2:1262987/1‑137 (MQ=255)

                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCCCTTGTACGTTGCAGC‑GACTGCCAGACCTAGCACCGCCCGCGCGGAACACAATCTGGCAGGCGCTgaca                                                                                                             >  2:16803605/1‑134 (MQ=255)

                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGACCGAGCACCACCCGCGTGGCACACGATCTGGCAGGTGCTTAACTATTg                                                                                                        >  2:11004677/1‑137 (MQ=255)

                                       cATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGTCAGGTCAAGGACCGCCAGCGCGGAAAAAGGTATGGAAAGCGCTGGACCCTTGggggg                                                                                                   >  1:11966958/1‑136 (MQ=255)

                                       cATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGCGGCACACGACCTGGCAGGCGCTGCACTATTGGAGGc                                                                                                   <  1:2955175/137‑1 (MQ=255)

                                         tttATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GTCTTCCCGATCGGGAACCGCCCACGCGGAACACGATCTGGGAGGCGGGGTACTCTTGGAggagg                                                                                                 >  1:7957228/1‑134 (MQ=255)

                                         tttATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GGCTGCCCAACCCAACACCACCCACACAGCACACAACCCGGCAAGCGCCGCACCCTTTGAGGCGt                                                                                                 >  1:10817288/1‑137 (MQ=255)

                                         tttATACCGAATGGGCCGAGAGCGACCTGAACAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑ACCTGCCAGATCGAGCACCACACGCGCGGCACACGATCTGGGATGCGCCGCACTATTGGAggagg                                                                                                 >  2:15294279/1‑134 (MQ=255)

                                               ccGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAAATCGAACACCACCCACTCGGTACACAATCTTGCAGGCACTGCACCCTTTGAGGCGTCCGccc                                                                                           >  2:10439211/1‑137 (MQ=255)

                                               ccGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCGCCCGATCGAGAACCACCCACGCGGGACACAATCTGGAAGGGGCGGGACTAGTGGGGGAGTGCGccc                                                                                           >  1:9390763/1‑137 (MQ=255)

                                               ccGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCGCCAGATCGAGCACCACCCACGCGGCACACGATCTGGCAGGCGCTGCACCATTGGAGGAGTACGccc                                                                                           >  2:10647423/1‑137 (MQ=255)

                                                   aTGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCGCCAAACCGAACACCGCCCCCACGGCAAACGATCTTGCAAGCGCTGCACCATTGGGAGCATACACCCCATc                                                                                       >  2:16346367/1‑137 (MQ=255)

                                                    tGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GGATGTCCGAGCGGGAACCCACCCCGCGGCACACAAACCGGCCAGCAATGCCCCCTTTGAGGAGTACGCCCCCTcc                                                                                      >  1:4817852/1‑136 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGT‑GGATGTCAGATCGGGCAACCCCCCCCCTGGACACAACCTGGTAAGAGGTGCCCCACTTGGGGGGTACTCCCCATcac                                                                                     >  1:15872457/1‑137 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCCTCCCA‑ATCGAAAACCCCCCACACCGNACACAAACCCGCCAGCGATGCACTCCTTGAGGCATACAccccaccac                                                                                     >  1:13653821/1‑132 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GTCTTCCCAGTCTAACACCGCCCGCGCAGCAAACAATCCTGTAGGCGATTCACTATTTGAGGCGTCCGCCCCATcac                                                                                     >  2:191765/1‑137 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GGCTGTCAAAGCGAACACCCCCCACGCGGAACAAAAGCTTGCAGGAGCTGCCCTCTTTGCGGAGTCCTCCCCATcca                                                                                     >  1:11790139/1‑135 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GGCCGCCAAACCAAAAACCCCCCACGCGGCAAAACACCCGGCAAGCGCTGCACCCTTTGAGGCGTCCACCCCATccc                                                                                     >  1:15872430/1‑135 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCTCCCGCGAGGGACACGATCTGGCAGGAAATGCCCTATTGGAGGCGTACGCCCCGTccc                                                                                     >  2:7552434/1‑135 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGAACGAGCACCGCCCGCGCGGCAAACGACATGGCAGGCGCTGCACTCTTGGAGGCGTCCGCCCCGTcac                                                                                     >  2:11819636/1‑137 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCGCCCAACCAAACACCACCCACACCGCACACAACCTTGCAAGCACCGCACCCTTTGAAGCATACGccccacccc                                                                                     >  2:9076811/1‑132 (MQ=255)

                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCGCCAGATCGAGCCCCGCCCGCGCGGCCCACGACCCGGCAGGTGCTGTACCACTGGAGGAGTACATCCCATcac                                                                                     >  2:9076859/1‑137 (MQ=255)

                                                         cGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GGCTGCCCAATCGAGCACCGACCACACGGCCCACGATCCTGCAAGCACTGTACTAGTTGAGGTGTCCAACCCGTccaagtc                                                                                 >  2:8724254/1‑131 (MQ=255)

                                                          gagaGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GACTTCCAGATCGAGCACCGCCCACGCGGAGCAAGATCTGGAAGGGGCTGCACTAGTGGGGGCGTAAGCCCCGTCAAATTat                                                                                >  2:2821338/1‑137 (MQ=255)

                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGT‑GCCCTCCAGAGCTAGCCCCGCCCCCGCTGCCCACGACCTGATAGGTGCTTCACCCTTGAGAGAGTCCACCCCGTCCCATTCTCCTCCCGCCa                                                                      >  2:15987439/1‑137 (MQ=255)

                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGTCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCa                                                                      >  2:12809538/1‑137 (MQ=255)

                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCACCCACACGGCACACGAGCTGGCAGGAGCTGCACCATTTGAGGCGTACGCCCCATCACACTATCCCCACGCCa                                                                      >  2:3607822/1‑137 (MQ=255)

                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCGCCCGATCGAGCACCCCCCACACGGCAAACGAGCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCATCACACTCTCCTCCCGccc                                                                      >  2:15319054/1‑136 (MQ=255)

                                                                               gCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTTCCAGATCGGGCACCGCCCGCGCGGAACCCGGTCTGGCAGGCGTTTCACCCCTGGAGGCGTACGCCCCGTCACACTATCATCACGCCACTGTCTTAAtt                                                           >  2:16547919/1‑136 (MQ=255)

                                                                                   gggCGCATTAACGCTCTTGTACGTTGCAGC‑GTCTGCCAGATCGAGGACCGCCCACACGGTACACGATCTGGGAGGAGCTGTCCTACTTGCGGTGGCCGTCCCGTCCCATTTTCCTCACGCCCCTCTCGTACCCTGcc                                                       >  2:10903696/1‑137 (MQ=255)

                                                                                   gggCGCATTAACGCTCTTGTACGTTGCAGC‑GGCTGCCAAATCGAGCACCACCCACGCGGCACACGAGCTTGCAGGCGCTGCACCATCGGAGGCATACGCCCCATCACACTGTCACCCCACCCCCCTCGTAATCTTcc                                                       >  2:15802279/1‑137 (MQ=255)

                                                                                   gggCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTTCCAGATCGAGCACCGCCCACGAAGCACACGAACTGGCAGGCGCCGCAACATTTGAGGCGTACGCCCCGCCACCCTATCCGCACACCACCGTCGTCATCTGcc                                                       >  2:8840115/1‑137 (MQ=255)

                                                                                   gggCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCTCCCAACCGAACACCACCCACGCGGAACACAACCTGGCAGGCGCCGTACCACTTGAGGCGTACGCCCCATCCCCCTATCCTCACACCACCTTCGTCATCTTcc                                                       >  2:3381294/1‑137 (MQ=255)

                                                                                   gggCGCATTAACGCTCTTGTACGTTGCAGC‑GCCCGCCCGATCGAGCACCGCCCACGCAGAACAAGACCTTGCAGGAGCTGCACTACTGGAGGCGTCCACCCCGTCAAATTCTTCTCACGCCAACGTCGTAATCTTcc                                                       >  2:6229633/1‑137 (MQ=255)

                                                                                   gggCGCATGAACGCTTTTGTACGTGGCAGC‑TCTTGACGGGTCGAGCACCGCTTGTGCGGCACACGGTTGGGCGGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGcc                                                       <  2:11450979/137‑1 (MQ=255)

                                                                                                              aGC‑GCCTGCCAGATAGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCg                            >  1:7199195/1‑137 (MQ=255)

                                                                                                                         aaaTCGAGCACCGCCCACATGGCACACGACCTGGCAGGCGCTGTACTACTGGAGGCGTACGCCCCGTCAAAGTATCATCAAGACACTGGCGTAATCTGCCGGCCAACTCTCTGCAAAAGGGCACACGGTATGCTCCg                  >  2:3176179/3‑137 (MQ=255)

                                                                                                                              gAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGc             >  1:11644639/1‑137 (MQ=255)

                                                                                                                                 cACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCAACTGTCGTAATATGCCGGACAACTCTATGCCACAGGTCACCCGGCATGCTCTGCCTGCTTg          >  2:5937930/1‑137 (MQ=255)

                                                                                                                                  aCCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGt         >  1:14890953/1‑137 (MQ=255)

                                                                                                                                    cgcccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCt       >  1:11310438/1‑137 (MQ=255)

                                                                                                                                    cgcccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCt       >  1:4990948/1‑137 (MQ=255)

                                                                                                                                       ccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAAc                                                >  1:15323616/1‑93 (MQ=255)

                                                                                                                                       ccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgc    >  1:13298274/1‑137 (MQ=255)

                                                                                                                                        cgcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgct   >  1:15393227/1‑137 (MQ=255)

                                                                                                                                        cgcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgct   >  2:6843514/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGCGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCAGGCCAACTCTATGCCACAGGTCACCCGGCCTGCTCCGCCTGCTTGTCTtgctg  >  2:5182490/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:11122723/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:2494388/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  <  1:3867158/137‑1 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:6242390/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:8769935/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:6616748/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:9315236/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:14602171/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:7990535/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:10612467/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:15693320/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:13973701/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:12368202/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:14162221/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:1435684/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:14683263/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:4560036/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:3867158/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:15648969/1‑137 (MQ=255)

                                                                                                                                         gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTATtgctg  >  2:5182491/1‑137 (MQ=255)

                                                                                                                                         gcgcaGCACACGATCTGGCAGGCGCTGCACTATTAGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTACTCTACCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:7200388/1‑137 (MQ=255)

CGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGC‑GCCTGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTG  >  AE015451_phaM1/4344176‑4344448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`