| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 539,294 | A→C | T558P (ACC→CCC) | rpoB CDS (DNA‑directed RNA polymerase subunit beta) → | |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 539,294 | 0 | A | C | 99.8% | 2165.3 / NA | 536 | T558P (ACC→CCC) | rpoB CDS (DNA‑directed RNA polymerase subunit beta) | |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (247/288); minor base T (1/0); total (248/288) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 560 total aligned reads displayed.
CAGCCAGCTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAG > AE015451_phaM1/539161‑539426 | cagccagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGTAGATTGCCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGcccc < 2:2523919/137‑1 (MQ=255)cagccagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGcccc > 1:10326190/1‑137 (MQ=255)cagccagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGcccc < 1:9204318/137‑1 (MQ=255)cagccagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGcccc < 1:2088002/137‑1 (MQ=255)cagccagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGcccc < 1:14432606/137‑1 (MQ=255) cagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTa < 2:15044530/137‑1 (MQ=255) cagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTa < 2:13496211/137‑1 (MQ=255) cagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTa < 2:10451129/137‑1 (MQ=255) cagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTa < 1:1266720/137‑1 (MQ=255) cagcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTa < 1:16403528/137‑1 (MQ=255) agcTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTAt > 2:3620982/1‑137 (MQ=255) tCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCg > 2:11161656/1‑137 (MQ=255) tCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCg > 1:14906125/1‑137 (MQ=255) gTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCgtgtgt < 2:1690312/137‑1 (MQ=255) tCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCCCTATGGCCGTGTGTGc > 2:7378258/1‑137 (MQ=255) aTGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGccc < 1:8681252/137‑1 (MQ=255) tGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCg > 2:14642372/1‑137 (MQ=255) gACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGAt < 2:12996824/137‑1 (MQ=255) gACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGAt < 2:12606495/137‑1 (MQ=255) gACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGAt < 2:6733098/137‑1 (MQ=255) aCCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTa > 1:1130138/1‑118 (MQ=255) aCCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATc > 2:10657030/1‑137 (MQ=255) aCCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATc > 2:926745/1‑137 (MQ=255) aCCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATc > 2:8975974/1‑137 (MQ=255) aCCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATc < 1:11722910/137‑1 (MQ=255) cAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCga < 2:13760061/137‑1 (MQ=255) acaacCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGAcc > 1:10525052/1‑137 (MQ=255) aacCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGAcccc > 2:15509248/1‑137 (MQ=255) aacCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGAcccc < 2:15369538/137‑1 (MQ=255) tctctcGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAg > 2:7090213/1‑137 (MQ=255) tctctcGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAg > 1:5745486/1‑137 (MQ=255) tctctcGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAg > 1:4760803/1‑137 (MQ=255) tctctcGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCAATATGGCCGTGTGTGCCCGATCGAGACCCCTGAAg > 2:12198565/1‑137 (MQ=255) ctctcGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAgg < 1:4545760/137‑1 (MQ=255) cGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGTCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCg > 1:15240117/1‑137 (MQ=255) cGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCg > 2:16346939/1‑137 (MQ=255) cGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCg > 1:3703530/1‑137 (MQ=255) cGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCg > 2:8832779/1‑137 (MQ=255) cGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCg > 1:11959922/1‑137 (MQ=255) ggAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGa < 2:1445261/137‑1 (MQ=255) ggAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGa < 1:2597766/137‑1 (MQ=255) ttACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATc < 1:3126370/137‑1 (MQ=255) tACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCg < 2:6334896/137‑1 (MQ=255) aCCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCAGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGCGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCgg > 2:14140424/1‑137 (MQ=255) ccACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATc > 1:7782458/1‑109 (MQ=255) ccACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTc > 1:1213649/1‑137 (MQ=255) cacaAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCt > 1:15470001/1‑137 (MQ=255) cacaAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCt < 2:5423951/137‑1 (MQ=255) acaAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTg > 2:280368/1‑137 (MQ=255) gccgcGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAAc > 1:12486033/1‑137 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc < 2:1567768/137‑1 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc < 2:8487197/137‑1 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc < 2:16107962/137‑1 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc > 2:3869262/1‑137 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc < 1:7248399/137‑1 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc < 2:8196865/137‑1 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc < 1:6511155/137‑1 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc > 1:6032710/1‑137 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc > 2:4454896/1‑137 (MQ=255) cgTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCATGAAGGTCCGAACATCGGTCTGATCAACTccc > 2:12257481/1‑137 (MQ=255) gTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCt < 1:7936642/137‑1 (MQ=255) ccGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTggcg < 2:3144562/137‑1 (MQ=255) cccTGGCGTTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGccc < 2:4169733/137‑1 (MQ=255) cccTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGccc < 1:10011549/137‑1 (MQ=255) cccTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGccc < 2:5146968/137‑1 (MQ=255) cccTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGccc < 2:2018602/137‑1 (MQ=255) ccTGGCGGTCTGCCCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCATGGCGGCCTATGCCCg > 2:8074597/1‑137 (MQ=255) ccTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCg > 2:3306588/1‑137 (MQ=255) ccTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCg > 1:1909803/1‑137 (MQ=255) ccTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCg > 1:6815533/1‑137 (MQ=255) cTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTccc > 1:4447001/1‑120 (MQ=255) cTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGc < 1:15705975/137‑1 (MQ=255) gCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCacc < 2:9836387/137‑1 (MQ=255) cTGACCCGGGCGCGTGCCGGCTTTGGAGTCCTTGACGTATACCCCCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCCGAAGGTCCGAACATCGGTCTGATCAACCCCCTGGCGGCCTATGCCCGCaccaacca < 2:216435/137‑1 (MQ=255) gACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTNATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGt < 1:16262456/137‑1 (MQ=255) aCCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTa > 2:13231061/1‑137 (MQ=255) tGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCt > 1:13945248/1‑137 (MQ=255) gCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTcc < 2:5818746/137‑1 (MQ=255) gCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTcc > 1:16017714/1‑137 (MQ=255) gCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTcc > 1:3976393/1‑137 (MQ=255) gCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTcc < 1:9466661/137‑1 (MQ=255) gCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTcc > 2:11716082/1‑137 (MQ=255) cGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCt < 1:13363678/137‑1 (MQ=255) cGTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACAGCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACTGCTTCCt < 2:7641597/137‑1 (MQ=255) gggCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTg < 1:8492806/135‑1 (MQ=255) gTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTg < 2:471021/137‑1 (MQ=255) gTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTg < 2:15534067/137‑1 (MQ=255) gTGCCGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTg < 1:9892048/137‑1 (MQ=255) ccGGCTTCGAAGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGaa < 1:10957087/137‑1 (MQ=255) aGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTAcc < 1:6305772/137‑1 (MQ=255) aGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTAcc < 1:10657030/137‑1 (MQ=255) aGTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTAcc < 2:947738/137‑1 (MQ=255) gTCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTActg < 1:1725258/137‑3 (MQ=255) tCCGTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACcgc < 1:14613819/137‑1 (MQ=255) ggTGACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCgt > 1:12971878/2‑137 (MQ=255) gACGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACAAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCgtggt > 1:1363262/1‑137 (MQ=255) cGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTga < 1:3430037/137‑1 (MQ=255) cGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTga > 1:4972052/1‑137 (MQ=255) cGTACACCCGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTga < 1:5336401/137‑1 (MQ=255) cccGCCCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTgaaggaag > 2:10274337/1‑137 (MQ=255) | CAGCCAGCTGTCCCAGTTCATGGACCAGAACAACCCTCTCTCGGAGATTACCCACAAGCGCCGCGTCTCCGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAG > AE015451_phaM1/539161‑539426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |