| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 1,932,640 | +C | intergenic (‑107/+43) | rluA CDS (23S rRNA (746) and tRNA (32) pseudouridine synthase) ← / ← minE CDS (Cell division topological specificity factor) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 1,932,638 | 1 | . | C | 93.6% | 1381.9 / 89.5 | 397 | intergenic (‑105/+45) | rluA CDS (23S rRNA (746) and tRNA (32) pseudouridine synthase)/minE CDS (Cell division topological specificity factor) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (23/2); new base C (206/158); total (237/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.52e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 416 total aligned reads displayed.
TCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTG‑C‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAT > AE015451_phaM1/1932502‑1932769 | tCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCTCCTGGCAA‑CCCTCTCCTCCCAAGGGTATGTGTCCCCCGTAGGAA‑CAGG‑G‑TTg > 1:1440734/1‑137 (MQ=255)tCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCACTCCCACAAAGGATATGCGTCCCATGTAGGAG‑CGGG‑C‑TTg > 2:6972166/1‑137 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGGAAGACCACTCCCCCAAAAGAAATGTGTCCCCCGTGGGAGAGGGG‑T‑TTT‑C‑C‑CCGAAGGGGTGTaaagaag > 1:6785111/1‑132 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAACCCGCCCCCCCAAAAGATATGCGTCCCCCTTAGGGG‑CGGGTT‑TTC‑C‑C‑CCGAAGGGCTGCAAGGAAg > 2:4787452/1‑137 (MQ=255) catcGGCATTGCGGGTCTCATGAAAATAGCGGTAAACGCTGGGGCTGCTTGGCGGCCCTTT‑GCGGGAAAGCCCGCTCCGACAAGGGATATGTGTCCCTTGTAGGAG‑TGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGc < 1:11500160/134‑1 (MQ=25) cAGCGGCATTGCAGGTCCCAAGAAAATAGAAGGAAATGTGGGGGCTGCTTTGCGGCCCTTC‑GCGGGAAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGGAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGc < 2:1328953/137‑1 (MQ=25) ggCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGTCCGCTCCCCCAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑ACGAAGGGCTGCAAGGCAGCCCCa > 2:338933/1‑137 (MQ=38) tGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑ACGGGCCAGCCCGCTCCTACAAAGGGTATTCGTCCCCCTTAGGGG‑GGGG‑A‑TTGCC‑C‑GCGAAGGGCTGCAAAGCAGCCCCAAAGTg > 2:15581055/1‑137 (MQ=255) tctcACGAAAATAGCAGTAAACGCTGGGGCCGTTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACt < 2:2916885/137‑1 (MQ=255) gAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCgg < 2:14412002/137‑1 (MQ=255) gAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCCACAAAGGATATGCGTCCCACGTAGGAG‑CGGG‑CTTTC‑C‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAACTGTCGACTACACgg > 2:16711098/1‑137 (MQ=37) aaaaTAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGACCGCTCCTCCAAAAGAGATGCGTCCACTGTAGGAG‑CGGG‑A‑TTGCC‑C‑GCGAAGGGCTGCAAAGCAGACCCAAAGTGTCGAATACGCggg > 2:1566777/1‑136 (MQ=25) aGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑ACGGGCAAGCCCGCTCCTACAAAGGATGTGTGTCCCCTGTCGGAG‑TGGG‑CTTTC‑C‑C‑GCTAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTCCACGGATCAGc > 2:13126343/1‑137 (MQ=255) gCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAAGATATGTGTCCCCTGTAGGAG‑CGGG‑CTTTT‑C‑C‑ACGAAGGGCTGCCAGGTAGAACCAAACTTTCCCATACGCGGATCcgcg > 1:8219155/1‑137 (MQ=21) gTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGGAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATc < 2:16320073/137‑1 (MQ=255) aaccGCTGGGGCCGCTTTGCGGCCCTTC‑GTGGACAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTACC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 1:1512026/134‑1 (MQ=38) aaaCGCTGGGGCCGCTTTGCGTCCCTTC‑GCGGGCAATCCCGCTCCTACAAAGGATATGCGTCCCCTGGAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 1:15905556/137‑1 (MQ=39) aaaCGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTTTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 1:12264819/137‑1 (MQ=255) aCGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGGAAGCCCGCTCCTCCAAAAGAGATGCGTCCCCCGTAGGAG‑CGGGAT‑TTT‑C‑C‑GCGAAGGGCTGCAAGGCAGCCCCCAACTGTCTACTCCACGGATCAGCGATCCGGc > 1:16857344/1‑137 (MQ=255) cgttGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCa < 2:2536276/134‑1 (MQ=255) gCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTCCAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGATGTCAAGCAGCCCCAAACTTTCTACTCCGCGGATCAGCTATCCCGCAg > 2:863658/1‑137 (MQ=21) cTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAgg < 2:3109947/137‑1 (MQ=255) gggCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCTTACAAAGGATATGCTTCCCTTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTg < 1:16078364/137‑1 (MQ=38) ccGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATg < 2:16494072/137‑1 (MQ=255) cGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAAGATATGCGTCCCCCGGAGGAG‑CGGG‑C‑TTGCC‑C‑ACGACGGGCTGCAAGGCAGCCCCAAATTGTCGACTCCGCGGATCAGCAATCCGGCAGGGTGgtgt > 2:9747328/1‑137 (MQ=37) tttttgCCCTTC‑GCGGGCAAGCCCGCTCCTACAAGGGATATGCTTCCCCTGTGGGAG‑CGGA‑C‑TTCCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAg < 1:5644580/132‑1 (MQ=38) tGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTCCAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGATGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCCACGATCCGGCAGGGGGGTGTTCAGc > 2:11749135/1‑137 (MQ=25) cccTTT‑GCGGGCAAGCCCGCTCCTCCAAAGGATATGCGTTCCCTGTAGGAG‑CGGG‑T‑TTG‑CTC‑GAGAAGAGCTGTAAGGCAGACCCAAATTGTCGAATACACGGATCAACGATCCGGGAGGGGGGTGTTCAGCTCCAg > 2:12937110/1‑137 (MQ=255) tttC‑GTGGACAATCCCGCTCCGACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGaa < 1:14795513/136‑1 (MQ=38) cgGGCAAACCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGag < 1:5023574/137‑1 (MQ=255) cccTCTCCTACACAGGATCTGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGcc < 2:843367/137‑1 (MQ=38) tCCTACAAGGAATATGCGTCCCCTGTAGGAG‑CGGT‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGt < 1:14213090/137‑1 (MQ=39) ccTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtt < 1:11017981/137‑1 (MQ=255) ccTAAAGAGGATATGCTTCCCCTGGAGGAG‑CGGT‑T‑TTT‑C‑CTGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtt < 1:995197/137‑1 (MQ=255) cTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGttt < 2:17289400/137‑1 (MQ=255) cTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGttt > 2:7379160/1‑137 (MQ=255) cTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGttt > 1:1832376/1‑137 (MQ=255) tACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtttt > 2:11829122/1‑137 (MQ=255) tACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtttt < 2:6309711/137‑1 (MQ=255) cAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTcc < 1:10927305/137‑1 (MQ=255) cAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTcc < 1:4319469/137‑1 (MQ=255) acaGGATATGCGTCCCCTGTGGGAG‑CGGG‑C‑GTGCC‑C‑GCGAAGGGCGGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCa < 1:13459830/135‑1 (MQ=38) aaaGGAGATGCGTCCCCTGTGGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCa < 2:6013284/137‑1 (MQ=255) caGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCAAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAg > 1:16363468/2‑137 (MQ=255) aGGATATGCGTCCCCTTTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc < 1:8691188/137‑1 (MQ=255) aGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc < 1:17273250/137‑1 (MQ=255) aGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc < 2:7988758/137‑1 (MQ=255) gATATTCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTc < 1:8959072/137‑1 (MQ=255) gATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTc < 1:2758068/137‑1 (MQ=255) gATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTc < 1:2320445/137‑1 (MQ=255) gATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTc < 1:13003019/137‑1 (MQ=255) gttcGTCCCCTGTAGGGG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTATGCGGATCAGCGATCCGGCAGGGTGATGTTTAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat < 1:8408446/134‑1 (MQ=38) atGCGTCCCTTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat < 1:6622404/137‑1 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 2:14186713/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 1:9456755/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 1:15535576/1‑137 (MQ=255) atGCGTCCCCTGTAGGAA‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat < 1:4097085/137‑1 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGCAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:9565986/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:10563598/1‑137 (MQ=255) cGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATg > 2:192197/1‑137 (MQ=255) cGTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATg > 2:9128903/1‑137 (MQ=255) gTCCCCTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGc > 2:8201795/1‑137 (MQ=255) tCCCATGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGca > 2:14926792/1‑137 (MQ=255) cccTGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGcaca > 1:6298258/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:17120993/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:3742878/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:10785139/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:10284709/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:11864916/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:12623400/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:341712/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTACAGAATCGAGCAGCTGCCCTGGTGTTCCAGCTCGATATGCAcatca > 2:7472658/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCAAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:14610295/1‑137 (MQ=255) gTAGGAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatcat > 2:1266609/1‑137 (MQ=255) gAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 2:5112001/1‑137 (MQ=255) gAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 1:15352758/1‑137 (MQ=255) gAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 1:7964124/1‑137 (MQ=255) gAG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 2:12124607/1‑137 (MQ=255) aG‑CGGG‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTg < 1:7660193/137‑1 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 2:9291516/1‑116 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat < 1:9291516/116‑1 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:253058/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:14632585/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:10621227/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:13517599/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:8843898/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:2228491/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:8245956/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:1656527/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:17140947/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:10018502/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:3049670/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:2764208/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:6151371/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:5824140/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:15943612/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:4066054/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:1027785/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:8494116/1‑137 (MQ=255) g‑C‑TTGCC‑C‑GCGAAGGGCTGCAAGGCAGCCCAAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:3555013/1‑137 (MQ=255) | TCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTC‑GCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTG‑C‑C‑GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAT > AE015451_phaM1/1932502‑1932769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |