| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 CDS (putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase) ← / ← PP_3395 CDS (Transcriptional regulator_ LysR family) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 3,845,703 | 1 | . | G | 96.4% | 1601.6 / 45.0 | 416 | intergenic (‑70/+28) | PP_3394 CDS (putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase)/PP_3395 CDS (Transcriptional regulator_ LysR family) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (1/14); new base G (292/108); total (294/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.32e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 450 total aligned reads displayed.
GCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGC‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATT > AE015451_phaM1/3845567‑3845834 | gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTTTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTcgc < 2:8793043/137‑1 (MQ=255)gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTcgc < 2:13828351/137‑1 (MQ=255)gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTcgc < 1:2539268/137‑1 (MQ=255)gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTcgc < 2:5352357/137‑1 (MQ=255) aTCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGC‑gggct < 1:11578140/137‑4 (MQ=255) cACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGGTTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAACGTTGCGCCAGCCTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTcgc‑gagctgc > 1:14716734/1‑131 (MQ=255) cACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGC‑gggctga > 1:3123593/1‑132 (MQ=255) cTTGCAGGCTCTGCAAGCCATCGCGCAGGCAGACTTCATTGATGGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATc > 2:13498415/1‑137 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCAt < 1:7921617/137‑1 (MQ=255) cAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCTTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATc < 2:7448600/137‑1 (MQ=255) aGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCATAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCg < 2:12769585/137‑1 (MQ=255) aGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCg < 1:3754134/137‑1 (MQ=255) aGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCg > 1:8256481/1‑137 (MQ=255) ggCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGt < 1:4685400/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTc < 1:711895/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTc < 2:8259989/137‑1 (MQ=255) ctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGc > 2:15631799/1‑137 (MQ=255) ctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTGATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGc < 1:9058424/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCNCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:16255681/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:17374115/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:6319068/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:5331120/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 2:13094542/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:10295498/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:11859106/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 2:1834523/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 2:17200641/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:14986317/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCAGTGATTGTTATTGTTTTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc < 1:12436156/137‑1 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTc > 2:1072629/1‑130 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTc < 1:1072629/130‑1 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACg > 1:1945515/1‑137 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACg > 2:2262513/1‑137 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACg > 1:11909536/1‑137 (MQ=255) cATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATgg > 1:17202940/1‑137 (MQ=255) cgcgCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCAGG‑CTGATCCATCGTCAGCCACGATGGATc > 1:511019/1‑137 (MQ=255) gcgcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCa > 1:434081/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAGAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc > 1:14237787/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGcc > 2:8625521/1‑124 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc > 1:9403208/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc > 1:5832995/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc > 2:14795354/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc > 1:13541864/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc > 1:4547526/1‑137 (MQ=255) aGGCCGACTTCATTGATTGTCATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCATccc < 1:11409448/137‑1 (MQ=255) gACTTCCTTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGGCTAAGAGCTGGGTGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCCGCCCCGGTGGATCAGCCcgcgta > 2:5069873/1‑135 (MQ=255) gACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGcc > 2:42015/1‑137 (MQ=255) gACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGCCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGcc > 2:16964742/1‑137 (MQ=255) attgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGcc > 2:11673504/1‑137 (MQ=255) tattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGc > 1:6678431/1‑137 (MQ=255) attgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCa > 2:11261955/1‑137 (MQ=255) attgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCa > 2:3349236/1‑137 (MQ=255) gttgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACgc > 1:15868037/1‑137 (MQ=255) tCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGGTCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACgcagca > 2:1004279/1‑137 (MQ=255) tCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCTTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACgcagca > 1:16095117/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:6235626/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:14485228/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 1:13311837/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:9511763/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:10893064/1‑137 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAgg > 2:13934618/1‑137 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCAACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAgg > 2:3866602/1‑137 (MQ=255) ctctctGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCAGTGCACGCAGCAACAGGTGGTc > 1:1777002/1‑137 (MQ=255) tctctGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCa > 2:5863923/1‑137 (MQ=255) gtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAg > 1:4101389/1‑137 (MQ=255) aGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccg > 1:10025341/1‑137 (MQ=255) aGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCAAGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCCGGCgccg > 1:9688225/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:9700530/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:1679272/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:15609596/1‑137 (MQ=255) gcgcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagccga > 1:15147533/1‑137 (MQ=255) gcgcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagccga > 1:10483941/1‑137 (MQ=255) gcCAGACTACGAACTGGATGACGGGCAGCCAAGACGTG‑TTTCGCGGG‑CTGATCCCTCGTCAACCACGATGGCTCAGACCGCGCCCTGCCAGGCCGGTGCACGCAACAACAGATGGTCAAGCAGGCGCCGAGCCGACa > 1:11114690/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:340405/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:16460613/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:2776772/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:740303/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:8691248/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:10373231/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGACGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:13654521/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAACCACGATGGATCAGCCCGCACCCTGCCAGGCCGGTGCACGCAGCAAAAGGTGGTTAAGCAGGCGCCGAGCCGACa > 1:103797/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCACCGTCCGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:2892161/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGC‑gg > 2:8925444/1‑46 (MQ=255) cAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCACCGAGCCGACAGc > 2:16099364/1‑137 (MQ=255) gttGGATGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCGAGCAGGCGCCGAGCCGACAGCGAGAGCgtgt > 2:7786619/3‑137 (MQ=255) ggaggaCGGGAAGAAAAGCCGTGTTTTGGG‑GG‑CGGATCCATCGTCAGCCACGAGGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc < 2:13184457/137‑1 (MQ=255) tGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 1:13026542/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 1:16581098/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 1:2211428/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 1:15414874/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCAAGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 2:9211747/1‑137 (MQ=255) gACGGGCAGAAACGACGTG‑TTTCGCGGG‑CTGATCCATCTTCAGCCACGATGGATCAGCCTGCGCCCTGCCAGGCCGGTGCACGCAGCAACAAGTGGTCCAGCCGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:15173848/1‑137 (MQ=255) gACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:4752608/1‑137 (MQ=255) gACGGGCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:6673080/1‑137 (MQ=255) gCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa > 2:5589890/1‑137 (MQ=255) gCAGAAAAGACGTG‑TTTCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa > 2:1333175/1‑137 (MQ=255) aaaaGACGTG‑TTTCGC‑GGCCTGGTCCACTGCCACCCAAGAGGGACAATCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACATGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCa < 2:6879733/137‑1 (MQ=255) tg‑tTTCGCGGG‑CTGATCCCTCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGa > 1:13871709/1‑137 (MQ=255) ttCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAtt > 2:11981882/1‑137 (MQ=255) ttCGCGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAtt > 2:1736017/1‑137 (MQ=255) | GCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTG‑TTTCGC‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATT > AE015451_phaM1/3845567‑3845834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |