| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 1,738,086 | Δ40,059 bp | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | 60 genes [PP_1532 CDS (putative Phage integrase)], PP_1533 CDS (putative Excisionase), PP_1534 CDS (conserved protein of unknown function), PP_1535 CDS (putative Methyltransferase), PP_1536 CDS (conserved protein of unknown function), PP_1537 CDS (conserved protein of unknown function), PP_5472 CDS (conserved exported protein of unknown function), PP_1538 CDS (conserved protein of unknown function), PP_1539 CDS (conserved protein of unknown function), PP_1540 CDS (conserved protein of unknown function), PP_1541 CDS (putative Methyltransferase), PP_1542 CDS (conserved protein of unknown function), PP_1543 CDS (conserved protein of unknown function), PP_1544 CDS (conserved protein of unknown function), PP_1545 CDS (conserved protein of unknown function), PP_1546 CDS (conserved protein of unknown function), PP_5473 CDS (putative transcriptional regulator_ LuxR family), PP_5474 CDS (conserved protein of unknown function of phage origin), PP_1548 CDS (conserved protein of unknown function), PP_5744 CDS (conserved protein of unknown function_ phage origin), PP_1549 CDS (Transcriptional regulator_ Cro_CI family), PP_1550 CDS (Transcriptional regulator_ Cro_CI family), PP_1551 CDS (putative Phage replication protein O), PP_1552 CDS (putative Phage replication protein), PP_1553 CDS (conserved protein of unknown function), PP_1554 CDS (conserved protein of unknown function), PP_1555 CDS (putative Phage integrase), PP_1556 CDS (conserved protein of unknown function), PP_1557 CDS (conserved protein of unknown function), PP_1558 CDS (conserved protein of unknown function), PP_1559 CDS (Holin), PP_1560 CDS (conserved protein of unknown function), PP_1561 CDS (putative Phage holin), PP_1562 CDS (putative Phage terminase_ small subunit), PP_1563 CDS (putative Phage terminase_ large subunit), PP_1564 CDS (conserved exported protein of unknown function), PP_1565 CDS (Phage portal protein_ HK97 family), PP_1566 CDS (Peptidase U35), PP_1567 CDS (Capsid protein), PP_1568 CDS (conserved protein of unknown function), PP_1569 CDS (conserved protein of unknown function), PP_1570 CDS (Head‑tail adaptor), PP_1571 CDS (conserved protein of unknown function), PP_1572 CDS (conserved protein of unknown function), PP_1573 CDS (putative Major tail protein), PP_1574 CDS (conserved protein of unknown function), PP_1575 CDS (conserved protein of unknown function), PP_1576 CDS (putative Immunity protein), PP_1577 CDS (Phage tail tape meausure protein_ lambda family), PP_1578 CDS (conserved protein of unknown function), PP_5475 CDS (conserved protein of unknown function), PP_1579 CDS (conserved protein of unknown function), PP_1580 CDS (conserved protein of unknown function), PP_1581 CDS (BNR domain protein), PP_1582 CDS (conserved protein of unknown function), PP_1583 CDS (putative Structural protein P5), PP_1584 CDS (conserved protein of unknown function), PP_5476 CDS (conserved protein of unknown function), PP_1585 CDS (putative Antidote protein), [PP_1586 CDS (putative Killer protein)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 1738086 | 1778144 | 40059 | 861 [0] | [0] 857 | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | [PP_1532 CDS (putative Phage integrase)],PP_1533 CDS (putative Excisionase),PP_1534 CDS (conserved protein of unknown function),PP_1535 CDS (putative Methyltransferase),PP_1536 CDS (conserved protein of unknown function),PP_1537 CDS (conserved protein of unknown function),PP_5472 CDS (conserved exported protein of unknown function),PP_1538 CDS (conserved protein of unknown function),PP_1539 CDS (conserved protein of unknown function),PP_1540 CDS (conserved protein of unknown function),PP_1541 CDS (putative Methyltransferase),PP_1542 CDS (conserved protein of unknown function),PP_1543 CDS (conserved protein of unknown function),PP_1544 CDS (conserved protein of unknown function),PP_1545 CDS (conserved protein of unknown function),PP_1546 CDS (conserved protein of unknown function),PP_5473 CDS (putative transcriptional regulator_ LuxR family),PP_5474 CDS (conserved protein of unknown function of phage origin),PP_1548 CDS (conserved protein of unknown function),PP_5744 CDS (conserved protein of unknown function_ phage origin),PP_1549 CDS (Transcriptional regulator_ Cro_CI family),PP_1550 CDS (Transcriptional regulator_ Cro_CI family),PP_1551 CDS (putative Phage replication protein O),PP_1552 CDS (putative Phage replication protein),PP_1553 CDS (conserved protein of unknown function),PP_1554 CDS (conserved protein of unknown function),PP_1555 CDS (putative Phage integrase),PP_1556 CDS (conserved protein of unknown function),PP_1557 CDS (conserved protein of unknown function),PP_1558 CDS (conserved protein of unknown function),PP_1559 CDS (Holin),PP_1560 CDS (conserved protein of unknown function),PP_1561 CDS (putative Phage holin),PP_1562 CDS (putative Phage terminase_ small subunit),PP_1563 CDS (putative Phage terminase_ large subunit),PP_1564 CDS (conserved exported protein of unknown function),PP_1565 CDS (Phage portal protein_ HK97 family),PP_1566 CDS (Peptidase U35),PP_1567 CDS (Capsid protein),PP_1568 CDS (conserved protein of unknown function),PP_1569 CDS (conserved protein of unknown function),PP_1570 CDS (Head‑tail adaptor),PP_1571 CDS (conserved protein of unknown function),PP_1572 CDS (conserved protein of unknown function),PP_1573 CDS (putative Major tail protein),PP_1574 CDS (conserved protein of unknown function),PP_1575 CDS (conserved protein of unknown function),PP_1576 CDS (putative Immunity protein),PP_1577 CDS (Phage tail tape meausure protein_ lambda family),PP_1578 CDS (conserved protein of unknown function),PP_5475 CDS (conserved protein of unknown function),PP_1579 CDS (conserved protein of unknown function),PP_1580 CDS (conserved protein of unknown function),PP_1581 CDS (BNR domain protein),PP_1582 CDS (conserved protein of unknown function),PP_1583 CDS (putative Structural protein P5),PP_1584 CDS (conserved protein of unknown function),PP_5476 CDS (conserved protein of unknown function),PP_1585 CDS (putative Antidote protein),[PP_1586 CDS (putative Killer protein)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 1738085 | 0 (0.000) | 857 (1.080) | 121/270 | 0.3 | 100% | intergenic (‑67/+1) | yffB CDS (putative glutathione‑dependent thiol reductase)/PP_1532 CDS (putative Phage integrase) | –/– |
| ? | AE015451_phaM1 | 1778145 = | 0 (0.000) | intergenic (‑1/‑196) | PP_1586 CDS (putative Killer protein)/PP_1587 CDS (NhaP‑type Na+_H+ and K+_H+ antiporters) | –/– | |||||
Only 100 of 857 total aligned reads displayed.
TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG < 2:13177903/137‑1 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG > 1:6071346/1‑137 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG < 2:7608609/137‑1 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG > 1:3822458/1‑137 TTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGC < 1:8808310/137‑1 TTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCATAAAGATTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGC < 1:13912635/137‑1 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:4827994/1‑137 TACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAA > 2:1429258/1‑137 CCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTAT < 1:9810703/137‑1 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAAAGTGTAAGTCATTGAATTTAAAGGGGCTGGGCTTACTCCCCAAAACCTCCCCAATATCTCCCAAAACTTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 2:15057299/1‑137 TTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAATGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCGGAATGCTTAACGTTATTCGTT < 1:1310938/137‑1 GGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTT < 1:11492028/137‑1 TCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGAT > 2:8552867/1‑137 TCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTAAATGCTTAACGTTATTCGTTAATTTCGAT > 2:1990213/1‑137 CAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTAT > 1:12742476/1‑137 GGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATAC < 1:4288237/137‑1 TTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACG < 2:705236/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAATGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:9362998/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:7555272/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:12556573/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:10053849/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:8140738/137‑1 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGCCGGG > 2:2653278/1‑137 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 2:17078845/1‑137 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 2:16106698/1‑137 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 1:9264312/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT < 1:1582395/137‑1 GCCGTAAAGAGTGTAAGTCATTGAATTTAAATGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATC < 2:3794402/137‑1 GCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGGCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATC < 2:8758065/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 1:13383123/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 1:11796515/137‑1 GTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCT > 1:3465563/1‑137 AAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAACTTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGT > 2:12202403/1‑137 AAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGT > 2:4185931/1‑137 AAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGT > 1:14319629/1‑137 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTATTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG < 2:922104/137‑1 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG < 2:8927493/137‑1 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG < 1:4777518/137‑1 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG < 2:11685885/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 2:5817233/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 1:13615728/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 2:17381374/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 1:3358186/137‑1 GTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAA < 2:2320854/137‑1 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:16672854/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:8022947/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:3016763/1‑137 AAGGCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCCGACTGCTTAACGTTATCCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:6591112/1‑137 AGTCATTGAATTTAAAGGGGCTGGGCTTACTCCCCAAAACCTCCCCACTATCTCCCAACAATTAGTCGCAGAAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTC > 2:6960749/1‑137 GTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCT > 2:10973755/1‑137 GTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCT > 2:10432857/1‑137 TTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAA < 1:4554731/137‑1 GAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATA > 2:13695853/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:14742789/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:6692221/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:10774646/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:8528385/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTACCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 2:14005554/1‑137 TTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTACCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGG > 2:7456898/1‑137 AAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGC < 2:16505280/137‑1 GGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACG < 1:7921624/137‑1 GGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACG < 2:8401451/137‑1 GGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCG > 1:1124522/1‑137 GGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCG > 2:10715291/1‑137 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC > 2:14547677/1‑137 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC > 1:17193418/1‑137 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC < 1:5638129/137‑1 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC > 2:6025606/1‑137 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTTAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 1:12419324/137‑1 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 2:12951508/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 2:11857321/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 2:16607887/137‑1 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 1:10023909/1‑137 CCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACAT < 2:3524596/137‑1 CCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACAT < 1:1601461/137‑1 TCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCT < 1:2760408/137‑1 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:1543440/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:14917579/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 1:2132163/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:5245833/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACT > 2:2859056/1‑113 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATC < 1:5842259/77‑1 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTCATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTTCGGTCACATCTGCTG > 1:10255891/1‑137 ATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGG < 1:2321767/137‑1 CTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATC < 1:16199831/137‑1 CTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATC < 1:7129690/137‑1 CTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATC < 1:6313948/137‑1 CTCCCAAAAATTAGTCGCAGGAGAGCNGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATC < 1:17440483/137‑1 CCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCAT > 2:8690637/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT < 1:2889988/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:9871096/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT < 1:5174950/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:8354754/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:11443374/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT > 2:13556258/1‑115 AGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACAT < 1:9503207/137‑1 TCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATAT < 1:16904966/137‑1 TCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATAT < 1:15021389/137‑1 GCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTC > 1:1825954/1‑137 GGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCC < 2:5455395/137‑1 TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |