| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,366,695 | Δ15,777 bp | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | 20 genes [PP_2964 CDS (putative transposase)], tnpC CDS (putative tnpA repressor TnpC), PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity), csoR CDS (putative repressor of copper utilisation proteins), PP_2970 CDS (conserved exported protein of unknown function), PP_2971 CDS (transposase), PP_2972 CDS (conserved protein of unknown function), dgkA‑II CDS (diacylglycerol kinase), PP_2974 CDS (putative sulfatase), PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3), PP_2976 CDS (putative transposase), PP_mr38 ncRNA (ALIL regulatory region), tnpB CDS (Tn4652_ transposase subunit B), PP_2978 CDS (conserved protein of unknown function), PP_2979 CDS (conserved protein of unknown function), PP_2980 CDS (conserved protein of unknown function), tnpS CDS (putative cointegrate resolution protein S), tnpT‑I CDS (putative cointegrate resolution protein T Tn4652), PP_2983 CDS (conserved protein of unknown function), [PP_2984 CDS (conserved protein of unknown function)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3366695 | 3382471 | 15777 | 793 [0] | [0] 778 | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | [PP_2964 CDS (putative transposase)],tnpC CDS (putative tnpA repressor TnpC),PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity),csoR CDS (putative repressor of copper utilisation proteins),PP_2970 CDS (conserved exported protein of unknown function),PP_2971 CDS (transposase),PP_2972 CDS (conserved protein of unknown function),dgkA‑II CDS (diacylglycerol kinase),PP_2974 CDS (putative sulfatase),PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3),PP_2976 CDS (putative transposase),PP_mr38 ncRNA (ALIL regulatory region),tnpB CDS (Tn4652_ transposase subunit B),PP_2978 CDS (conserved protein of unknown function),PP_2979 CDS (conserved protein of unknown function),PP_2980 CDS (conserved protein of unknown function),tnpS CDS (putative cointegrate resolution protein S),tnpT‑I CDS (putative cointegrate resolution protein T Tn4652),PP_2983 CDS (conserved protein of unknown function),[PP_2984 CDS (conserved protein of unknown function)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3366694 | 0 (0.000) | 769 (0.980) | 118/268 | 0.3 | 100% | intergenic (+360/‑1) | PP_2962 CDS (Alcohol dehydrogenase_ zinc‑containing)/PP_2964 CDS (putative transposase) | –/– |
| ? | AE015451_phaM1 | 3382472 = | 0 (0.000) | intergenic (+1/‑28) | PP_2984 CDS (conserved protein of unknown function)/PP_5545 CDS (protein of unknown function) | –/– | |||||
Only 100 of 793 total aligned reads displayed.
TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 2:12978637/137‑1TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 1:10575696/137‑1TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 1:12966327/137‑1 TGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCA > 2:6209674/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:5307897/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:9011573/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:15124526/1‑137 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA < 1:3584005/137‑1 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA < 2:2953024/137‑1 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA < 1:11954682/137‑1 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGCTGCTTTTGCCTCGCTTGGGGGCCGCAGGGCA > 2:4155601/1‑137 CAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCA < 2:3362186/137‑1 AAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAA > 2:7869416/1‑137 ATTAGGACCTTCGTTCTGTAAATATATGATTTAAAAGGCTATTCTAGCGGCCTTGGCTTGCTGGTCATCCACCTTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 2:6354592/137‑1 TTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGG < 2:14748642/137‑1 TTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGG < 1:10020025/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 1:1425442/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:11984723/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 1:4950098/137‑1 GACATTCGTTCTGTAAATATATGATTAAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:6768952/137‑1 ACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCG > 2:12590013/1‑137 ATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGTCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGA > 1:17329567/1‑137 TCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAAT < 1:847226/137‑1 CGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATG < 2:12275437/137‑1 TTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAC > 1:619220/1‑137 TTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAC < 2:1734777/137‑1 ATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACA < 1:11035878/137‑1 TTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACGAATGAC > 2:6992452/1‑137 TTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGAC > 2:3761411/1‑137 TTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATACTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGAC > 2:5059352/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 2:9853620/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 2:926713/1‑137 AAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACC > 2:1995549/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 1:4217743/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 1:4677790/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 2:8998593/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 2:4413535/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 2:1623453/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA < 1:16314896/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 2:5673365/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:16509797/137‑1 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 1:3973977/1‑137 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 1:2473109/1‑137 CGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGC > 1:567552/1‑137 GAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCT > 2:11120496/1‑137 CCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTA > 1:8119612/1‑137 GTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAAC > 2:7374357/1‑137 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 2:2307347/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 1:11623987/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 2:2527628/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 2:3170442/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:8690240/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:3170442/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:15845061/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:14954560/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 2:16965809/1‑137 GCTTGCTGGTCATCCACCGTCTGGCTAGCCGACTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATTACTACCGACGATTCGCCGATCTAACGCG < 2:8513050/137‑1 GGTCATCCACCGTCTGGCTAGCCGTCTCTGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCCAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 1:7618476/1‑137 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 2:10334148/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 2:5995850/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT < 1:9707263/137‑1 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:16757593/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:17124369/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 2:10056097/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:8725061/128‑1 CCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCT < 1:10227509/137‑1 CCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCT > 2:14308475/1‑137 CCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 2:4843655/108‑1 GTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGT < 2:14041749/137‑1 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:9255820/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG < 1:12217929/137‑1 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:6850132/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 2:7469021/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:5312438/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:15991448/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 2:1098769/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:13383287/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:17505227/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:10856290/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:2921581/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:14532238/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:2113813/1‑137 CTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGC > 1:12596003/1‑137 AGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGG < 2:15574562/137‑1 AGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGG > 1:7201393/1‑137 GTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTT > 1:273229/1‑137 CTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGG < 1:8632323/137‑1 GCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 1:15423353/1‑137 GCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 1:13794492/1‑137 GCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 1:6593398/1‑137 GCTGATGCTTCTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 1:7422113/1‑137 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC > 2:16664714/1‑137 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC < 1:11408866/137‑1 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATAGACTCGGAATGCCCAACTCAACAAATGACGACCGACGACTCGCTGATCTAACGCGCTAGGCATTAGCTGACGTAAGCGCGGGTTTGGTGATTGATCAC > 1:17599338/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG > 2:11685606/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT < 1:15698967/137‑1 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 2:16442581/1‑137 CCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:13329044/108‑1 TCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGT > 2:9691705/1‑137 TGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGA > 2:10772083/1‑137 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |