| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,412,992 | Δ35,612 bp | [PP_3026 CDS (putative Phage recombinase)]–PP_5557 CDS (protein of unknown function) | 47 genes [PP_3026 CDS (putative Phage recombinase)], PP_3027 CDS (conserved protein of unknown function), PP_3028 CDS (conserved protein of unknown function), PP_3029 CDS (DNA cytosine methyltransferase family protein), PP_3030 CDS (conserved exported protein of unknown function), prtN CDS (Transcription regulatory protein PrtN), PP_3032 CDS (DNA‑binding protein Roi‑related protein), PP_5552 CDS (conserved protein of unknown function), PP_5553 CDS (conserved protein of unknown function), PP_3033 CDS (putative transcriptional repressor_ CI_C2 family), PP_3034 CDS (putative Regulator protein), PP_3035 CDS (conserved protein of unknown function), PP_5554 CDS (protein of unknown function), PP_3036 CDS (conserved protein of unknown function), PP_5555 CDS (conserved protein of unknown function), PP_3037 CDS (C4‑type zinc finger protein_ DksA_TraR family), PP_3038 CDS (Pyocin R2_PP_ traC domain protein), PP_3039 CDS (conserved protein of unknown function), PP_3040 CDS (Pyocin R2_PP_ holin), PP_3041 CDS (conserved protein of unknown function), PP_3042 CDS (putative Terminase_ large subunit), PP_3043 CDS (conserved protein of unknown function), PP_3044 CDS (Phage portal protein_ lambda family), PP_3045 CDS (putative ClpP protease), PP_3046 CDS (conserved protein of unknown function), PP_3047 CDS (conserved protein of unknown function), PP_3048 CDS (conserved protein of unknown function), PP_3049 CDS (conserved protein of unknown function), PP_3050 CDS (conserved protein of unknown function), gpV CDS (Pyocin R2_PP_ tail spike protein), PP_3052 CDS (conserved protein of unknown function), gpW CDS (Pyocin R2_PP_ baseplate protein), gpJ CDS (Pyocin R2_PP_ baseplate_tail fiber protein), gpI CDS (Pyocin R2_PP_ tail formation protein), PP_3056 CDS (putative Pyocin R2_PP_ tail fiber protein), PP_3057 CDS (putative pectinesterase), PP_3058 CDS (conserved protein of unknown function), PP_3059 CDS (putative tail sheath protein), PP_3060 CDS (putative tail sheath protein), PP_3061 CDS (conserved protein of unknown function), PP_3062 CDS (putative Pyocin R2_PP_ tail length determination protein), gpU CDS (Pyocin R2_PP_ tail formation protein), PP_3064 CDS (Phage tail protein), gpD CDS (Pyocin R2_PP_ tail formation), PP_3066 CDS (Pyocin R2_PP_ lytic enzyme), PP_5556 CDS (putative bacteriophage lysis protein), PP_5557 CDS (protein of unknown function) |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3412992 | 3448603 | 35612 | 1032 [0] | [0] 1035 | [PP_3026 CDS (putative Phage recombinase)]–PP_5557 CDS (protein of unknown function) | [PP_3026 CDS (putative Phage recombinase)],PP_3027 CDS (conserved protein of unknown function),PP_3028 CDS (conserved protein of unknown function),PP_3029 CDS (DNA cytosine methyltransferase family protein),PP_3030 CDS (conserved exported protein of unknown function),prtN CDS (Transcription regulatory protein PrtN),PP_3032 CDS (DNA‑binding protein Roi‑related protein),PP_5552 CDS (conserved protein of unknown function),PP_5553 CDS (conserved protein of unknown function),PP_3033 CDS (putative transcriptional repressor_ CI_C2 family),PP_3034 CDS (putative Regulator protein),PP_3035 CDS (conserved protein of unknown function),PP_5554 CDS (protein of unknown function),PP_3036 CDS (conserved protein of unknown function),PP_5555 CDS (conserved protein of unknown function),PP_3037 CDS (C4‑type zinc finger protein_ DksA_TraR family),PP_3038 CDS (Pyocin R2_PP_ traC domain protein),PP_3039 CDS (conserved protein of unknown function),PP_3040 CDS (Pyocin R2_PP_ holin),PP_3041 CDS (conserved protein of unknown function),PP_3042 CDS (putative Terminase_ large subunit),PP_3043 CDS (conserved protein of unknown function),PP_3044 CDS (Phage portal protein_ lambda family),PP_3045 CDS (putative ClpP protease),PP_3046 CDS (conserved protein of unknown function),PP_3047 CDS (conserved protein of unknown function),PP_3048 CDS (conserved protein of unknown function),PP_3049 CDS (conserved protein of unknown function),PP_3050 CDS (conserved protein of unknown function),gpV CDS (Pyocin R2_PP_ tail spike protein),PP_3052 CDS (conserved protein of unknown function),gpW CDS (Pyocin R2_PP_ baseplate protein),gpJ CDS (Pyocin R2_PP_ baseplate_tail fiber protein),gpI CDS (Pyocin R2_PP_ tail formation protein),PP_3056 CDS (putative Pyocin R2_PP_ tail fiber protein),PP_3057 CDS (putative pectinesterase),PP_3058 CDS (conserved protein of unknown function),PP_3059 CDS (putative tail sheath protein),PP_3060 CDS (putative tail sheath protein),PP_3061 CDS (conserved protein of unknown function),PP_3062 CDS (putative Pyocin R2_PP_ tail length determination protein),gpU CDS (Pyocin R2_PP_ tail formation protein),PP_3064 CDS (Phage tail protein),gpD CDS (Pyocin R2_PP_ tail formation),PP_3066 CDS (Pyocin R2_PP_ lytic enzyme),PP_5556 CDS (putative bacteriophage lysis protein),PP_5557 CDS (protein of unknown function) |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3412991 | 0 (0.000) | 1022 (1.330) | 137/262 | 0.0 | 100% | coding (1/1626 nt) | PP_3026 CDS (putative Phage recombinase) | |
| ? | AE015451_phaM1 | 3448604 = | 0 (0.000) | intergenic (‑472/‑199) | PP_5557 CDS (protein of unknown function)/PP_3067 CDS (conserved protein of unknown function) | –/– | |||||
Only 100 of 1035 total aligned reads displayed.
ATCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3412853‑3412991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaCGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGGGGC > AE015451_phaM1/3448604‑3448739 ATCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGG < 1:2981952/137‑1ATCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGG < 1:12732418/137‑1 CAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTAC < 1:11042210/137‑1 CAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTAC < 1:3435920/137‑1 AGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACG > 1:14893410/1‑137 CATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCC < 1:14609235/137‑1 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 1:10097775/1‑137 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 1:7963237/1‑137 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 2:9692605/1‑137 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 1:9377849/1‑137 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 1:15768060/1‑137 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 2:679986/1‑137 TTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGT < 2:3698874/137‑1 TTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGT < 2:10685868/137‑1 TGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTA > 2:8224507/1‑137 TGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTA > 1:17429142/1‑137 ATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGG < 2:395104/137‑1 ATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGG < 1:16897671/137‑1 CGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTG < 2:13661025/137‑1 CGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTG < 2:8905182/137‑1 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 1:5063987/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:11602401/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:9110293/1‑137 TTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGAT < 1:11675368/137‑1 ttGATTTTCAATCCCCATGCAGCTAGGCTGTTGGCGCACTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAG < 2:16493830/135‑1 TGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAG < 1:13843906/137‑1 TGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAG < 2:8526843/137‑1 TGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAG < 1:1192306/137‑1 GGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGA < 1:8523214/137‑1 ATTTTCAATCCCCAGGCAGTTAGGCTGTTGGCGCGCTCATGTTTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 1:17617985/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 2:14828166/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 1:7387918/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 2:11261446/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 1:4149286/137‑1 CAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTG < 1:2381284/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:10605700/137‑1 CAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGA < 1:16402254/137‑1 AGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAG > 2:10996082/1‑137 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 2:15366666/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 1:620493/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 2:217023/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 1:2017596/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 1:829393/137‑1 GGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCA > 1:8927243/1‑137 GCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCAT < 1:11379287/137‑1 TGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGC > 1:4703134/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 2:15733001/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 2:12391524/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 2:9837932/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 1:12187660/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 1:12911342/1‑137 ATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGC > 2:5017694/1‑137 ATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGC > 2:7766955/1‑137 TTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTA < 1:6525570/137‑1 CGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAA < 1:3828348/137‑1 CGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAA < 2:16674829/137‑1 CCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACG > 1:17162507/1‑137 CGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGA < 1:13237819/137‑1 GGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATC < 1:12538423/137‑1 GGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGAGAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATC < 2:6277075/137‑1 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGGTGGAGGAGGTGGTACGGAGCTGTGGGCATGCATTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 2:8038814/1‑137 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 2:5495393/1‑137 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 2:5806568/1‑137 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 2:14442228/1‑137 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 2:7489556/1‑137 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 1:5549572/1‑137 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 1:1519491/1‑137 cttgccTTCCCAATTGGAGTGAAATCAGAGTACGACCGGAGTATTTAAGCTAATAGAGGAGGTAGTACGGAGCCGTAGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:13319004/7‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:2485996/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:17392013/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:11915960/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:10179629/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 1:10869877/1‑137 TGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGC > 1:13549497/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 1:696338/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 2:1840810/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 2:16113458/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAGTACGATCATCATCAATGGCTTAGGAGCTTT > 2:2874098/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 2:4699082/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 1:16036160/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 2:5985228/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGG > 2:321918/1‑44 TTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTC < 2:7080818/137‑1 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 1:3140092/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:13008194/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:13854966/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 1:2163480/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:15254082/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 1:5895336/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:16839911/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGCGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:17183278/1‑137 GGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTG > 1:9884451/1‑137 GGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTG > 1:2550674/1‑137 GAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTTATAGAGGAGGTGGTACGGCGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGCTCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGG > 2:3574651/1‑137 GAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGG < 1:10471235/137‑1 GAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGG > 1:15522010/1‑137 AGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTNGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGAC > 1:17038571/1‑137 GGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACG < 1:14214437/137‑1 GGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACG < 1:7216562/137‑1 TACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGGGG > 2:12083403/1‑137 ATCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3412853‑3412991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaCGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGGGGC > AE015451_phaM1/3448604‑3448739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |