Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM14,344,3120GA49.4% 20.9 / 40.3 99intergenic (+43/‑113)PP_3817 CDS (Polyamine ABC transporter_ ATP‑binding protein)/PP_3818 CDS (Periplamic phosphate‑binding protein)–/–
Reads supporting (aligned to +/- strand):  ref base G (35/7);  new base A (40/1);  total (91/8)
Fisher's exact test for biased strand distribution p-value = 5.74e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 162 total aligned reads displayed.

CGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTG  >  AE015451_phaM1/4344176‑4344448
                                                                                                                                        |                                                                                                                                        
cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  1:10330864/137‑1 (MQ=255)
cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  1:10330906/137‑1 (MQ=255)
cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  1:2441953/137‑1 (MQ=255)
cGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCAccgcccg                                                                                                                                          <  2:11821830/137‑1 (MQ=255)
  aCAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTGTCCGATCGAGCACCACCcacg                                                                                                                                        >  1:17068381/1‑137 (MQ=255)
  aCAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcg                                                                                                                                        >  2:7311680/1‑137 (MQ=255)
    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  1:9913840/137‑1 (MQ=255)
    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  1:4803068/137‑1 (MQ=255)
    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  1:2702452/137‑1 (MQ=255)
    aGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  1:15791545/137‑1 (MQ=255)
    aGCGTGAAGGTGCGTTGGGCAGTGACAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  2:12033257/137‑1 (MQ=255)
     gCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCgg                                                                                                                                     <  1:8928047/137‑1 (MQ=255)
      cGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCGGc                                                                                                                                    <  2:8634390/137‑1 (MQ=255)
        tGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCCGCCAGATCGAGCACCGACCACACGGcac                                                                                                                                  >  1:7636194/1‑137 (MQ=255)
        tGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCAGcac                                                                                                                                  >  1:10201634/1‑137 (MQ=255)
         gAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGACGCCAAAGCAAGCACCCCCCACACGGcaca                                                                                                                                 >  1:9474686/1‑137 (MQ=255)
          aaGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCGGCacac                                                                                                                                <  2:2536613/137‑1 (MQ=255)
          aaGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCGGCacac                                                                                                                                <  2:6549041/137‑1 (MQ=255)
          aaGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCGGCacac                                                                                                                                <  1:1126763/137‑1 (MQ=255)
           aGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGACTGCCAGATCAAGCACCGCCCGCGCGGCAAACg                                                                                                                               >  1:9829399/1‑137 (MQ=255)
            ggTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTTCCAGATCTAACACCACCCACGCGGCACACGa                                                                                                                              >  2:15561102/1‑137 (MQ=255)
            ggTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCGGCACACGa                                                                                                                              >  2:12842333/1‑137 (MQ=255)
               gttttGGGCAGTGGCAGACGCTGGCGTTTATACCGAGTGGGCCGAGAGCGACCTGAGAAGTTTGGCCGGGGCGCATGAACTCTTTTGTGTTTTGCAGTGCTTACAAGATTGGGCACCGCCCGTGTGGCACATGAttt                                                                                                                           <  2:8697305/134‑3 (MQ=255)
               gtgTTGGGAGGGGGAAGACGTTTGCGTTTGGACCGAGTGGTCTGAGAGCGACCGGAGAAGTTTGGCTGGGGCGCATGAACGCTTTTGTATGTTGCAGCGCTTGCAAGATCGAACACCGCCCGCGCGGCACACGAttg                                                                                                                           <  2:8315371/135‑3 (MQ=255)
                cGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCTAGCACCGCCCACGCGGAACACGAGCTg                                                                                                                          >  2:3751238/1‑137 (MQ=255)
                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGTCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGACAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCa                                                                                                                       >  2:4942613/1‑137 (MQ=255)
                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTGCCCGATCGAGAACCGCCCCCGCGGAACACAAGCTTGCa                                                                                                                       >  1:16566600/1‑137 (MQ=255)
                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTGCCCAGTCTAGCACCGCCCGTGCGTCACCCAGTCTGGCa                                                                                                                       >  2:12786677/1‑137 (MQ=255)
                   tGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATCAACACTCTTGTACGCTTCAGCGCCTCCCAAATCCAGCAACGCCCGCACGTTACACACTCTgggc                                                                                                                       >  2:11092606/1‑135 (MQ=255)
                        aGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCCGCCCAAACAAAAACCACACACACGGCACACGACCTGGCAGgcgc                                                                                                                  >  1:4088964/1‑137 (MQ=255)
                          tGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTGCCAAATCGAAAACCACCCGCACGGAACCCAATCTGGCCGgagccg                                                                                                                >  1:11752534/1‑135 (MQ=255)
                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTGTCAGAGCGAACACCCCCCACCCGGCACACAAACTCGTCGGCGCTGCAc                                                                                                             >  1:5490083/1‑137 (MQ=255)
                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGTCAGATCGAGAACCGCCCACGCGGCACCAAACCTGGCAAGCGCTGAAc                                                                                                             >  1:3346530/1‑137 (MQ=255)
                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCCTCCCGATCGAACCCCCCCCGCGCGGCACACAATCCTGCAGGCGATGCAc                                                                                                             >  1:14883486/1‑137 (MQ=255)
                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCCTCCCGACCGAGCACCACCCCCGCGGACCACAACCCTGCCGGAGCTGCAc                                                                                                             >  1:10629226/1‑137 (MQ=255)
                             cAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCCGCCCGATCGAGCACCGCCCACGCGGCAAACCATCTTGCCGGCACTGCAc                                                                                                             >  2:8011264/1‑137 (MQ=255)
                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGTGCCTGCCAGATCGAGCACCGCCCTCGCGGCGCACAATCTTGCAGGCGCTGCAATATTg                                                                                                        >  2:10869127/1‑137 (MQ=255)
                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTGCCAAATCGAACACCCCCCACGCGGCAAACGAGCTGGCAAGAGATGCACCATTg                                                                                                        >  1:3364556/1‑137 (MQ=255)
                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTGACCAAGCGAGCAACACCCCCGCGGAAAACAAGCTGGAAGGAGGTGCAcccttt                                                                                                        >  1:9258727/1‑132 (MQ=255)
                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGACGCCAGACCGAGCACCACCCACGCGGACCACGACCTGGCAAGAGTTGCACTactt                                                                                                        >  1:11126568/1‑134 (MQ=255)
                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTTCCCAATCCAGCACCGCCCTCTCATCACACAATCTCGCCAGTGCTGCACCAttt                                                                                                        >  1:13596524/1‑136 (MQ=255)
                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCACGTGGCACACGATCTGGCAGGGGCTGCACCATTg                                                                                                        >  2:4107708/1‑137 (MQ=255)
                                  gCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGACTGCCCGGCCGAGCACCGCCCACACAGCACAAAACCTGGTAGGCGCTGAAcccttt                                                                                                        >  1:11946168/1‑132 (MQ=255)
                                       cATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTGCCCGATCGAGTCCCACCCGCACGGAACACGGCCCGGTAGGCGCTTCACTCTTGGAggg                                                                                                   >  2:3142103/1‑136 (MQ=255)
                                         tttATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGACTTCCCGATCTAGCACCCCCCCCTCGGACCACAAGCTGGCAGGCGCTGCCCTCTTTGAGGGGt                                                                                                 >  1:11007787/1‑137 (MQ=255)
                                               ccGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCAAGCACCGCCCACGCGGAACACGAGCTGGCCGGGGTTGTACTATTTGAGGAGTACGccc                                                                                           >  2:5382268/1‑137 (MQ=255)
                                                 gAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTTCCCGACCGAACACCACCCACGCAGAACAAAAGCTGGCAAGAGATTCACTACTTGAGGAGTACGACCCg                                                                                         >  2:9167589/1‑137 (MQ=255)
                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTTCCCGATCGAGCACCACCCACGCGGGACACGAGCTTGGCGGGGCTGTACTCTTTGGGGTGTGCGCCCCCTccc                                                                                     >  2:11507460/1‑135 (MQ=255)
                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTGCCCAATCGAACACCAACCCCGAAGCACACAAACTGGCAGGAGATGACATCTTGGAGGAGGACGCCCCCTcca                                                                                     >  1:13261041/1‑135 (MQ=255)
                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAAACCCACCCGCGCAGGACAAAACCTGGCAGGGGCTGCCCTACTGGGGGCGTCCAcccacgcca                                                                                     >  2:255105/1‑131 (MQ=255)
                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAAAGCGAGCACCACCCACGCGGCACACAACCTGGGAAGAGCTGCAACCTTTGAGGCGTACACCCCATccc                                                                                     >  2:13950954/1‑135 (MQ=255)
                                                     gggCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCCGCCAGATCTAGCACCACCCCCCCGGCACACGATCCTGCAGGCGCTGCACCCTTTGAGGCGTCCACCCCATccc                                                                                     >  2:17345166/1‑135 (MQ=255)
                                                       gCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCCGCCCAACCAAGCACCCCCCCCGCGGAACACAACCTTGCCGGCTCTGTCCCATTTGAGGCGTACACCCCCTcacct                                                                                   >  1:3778572/1‑135 (MQ=255)
                                                         cGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGGCTGCCCGACCTAACACCACCCCCACAGCACAAAACCCTGCAAGCGCCGCACCACTTGAGGCGTCCGCCCCATcccactc                                                                                 >  2:6189901/1‑134 (MQ=255)
                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTCCGTTGCAGTGACTGCCCGATCGAGCACCGCCCGCGCGGGACACGGCCTGGCAGGGGCTTTCCTATTGGAGGTGTATGCCCCGTCAAATTattatcctggca                                                                      >  2:3488450/1‑131 (MQ=255)
                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTTTCAGATCTAGCACCGCCCGTGCGGCACACGATTTGGGAGGTGGTGCACTATTGGAGGCGTACGCCCCGTCGCATTATTATCCCGCCa                                                                      >  2:3488413/1‑137 (MQ=255)
                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTGTCAGATCGAGCACCGCCCGCGTGGGACCCGATCTGGCAGGCGCTTTCCTACTGGAGGCGTCCACCCCTTCCCATTATCCTCCCGccc                                                                      >  2:14255113/1‑136 (MQ=255)
                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTGCCAAATTGAACACCGCCCGCGCGGTACACAACCTGGCAGGTGCTGTACTATTGGGGGCGTACTCCCCATCACACTATCATCACGCCa                                                                      >  2:15290147/1‑137 (MQ=255)
                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTTCCCAAGCGCACACCCCCCACGCGGAACACGATCTGGCAGGCGCCGCACCACTTGAGGCGTACGCCCCATCACATTCTCCCCACACCa                                                                      >  2:2659584/1‑137 (MQ=255)
                                                                    tGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCACCCACGCGGCAAACGAGCCGGCAGGCGCTGCAATCGTGGAGGTGTACTCCCCATCACACTATCACCACGACa                                                                      >  2:13527826/1‑137 (MQ=255)
                                                                     gAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGTCTTCCCAATCGAGCACCGCCCACGCGGCACCCGAGCCTGCAGGCGCTGGAACATTGGGGGCGTACGTCCCGTTGCATTCCTCTCACGCCAc                                                                     >  2:17109002/1‑137 (MQ=255)
                                                                              ggCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAAAGCGAGCACCGCCCACGCGGCACAAGAGCTGGCAGGGGGCGCACCATTGGAGGCGTACACCCCGTCACACTATCACCCAACCACCGTCGTaac                                                            >  2:12637924/1‑136 (MQ=255)
                                                                                                    tGTACGTTGCAGCGCCTGTCAGATCGAGCACCACCCGCGAGGCACACGACTTGGCAAGTAACGCACTATTGGAGGCGTACGCCCCGTCAAACTATCATCCCGCCACTGTTGTCATTTGCCAGCCAACTTTATGCcac                                      >  2:15834026/1‑137 (MQ=255)
                                                                                                      tACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      >  2:6817973/1‑39 (MQ=255)
                                                                                                      tACGTTGCAGCGCCTGCCAGATCGAGCACCGCCcgcgcg                                                                                                                                      <  1:6817973/39‑1 (MQ=255)
                                                                                                              aGCGCCCGCCAGATCGAACACCGCCCGCACGGACCCCGACCCGGCCGGCGCTGCACCCTTTGAGGCGTACACCCCGTCCCATTCTCATCACGCCACTGTCGTAATCTGCCAGTCCAATCCATGCCCAAGGTCaaacg                            >  2:12573477/1‑133 (MQ=255)
                                                                                                                        aaaTCGAGCACCACCCCCGCGGCACACGATCTGGCAGGCGCTGTACCCTTTGAGGAGTACGCCCCGTTACACTCTCATCACGCCAATGTCTTCCTCTGCCGGACAACTCTCTGCCACAAGTCACCCGGCATGCTCCg                  >  2:3279831/3‑137 (MQ=255)
                                                                                                                          aTCGAGCACCGCCCGCGCGGAAAAAGACCTGGCAGGAGCTGCAACACTGGAGGCGTCCACCCCCTCACACTCTCATCAAGCCACTGTTGTAATCTGCCGGCCAACCCTATGTCACAGGTCACCCAGCATGCttcacc                >  2:14673847/1‑132 (MQ=255)
                                                                                                                          aTCGACCCCCCCCCAAGCGACACACAATTTGCCACCCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGcc                <  2:13825952/137‑1 (MQ=255)
                                                                                                                             gAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGc             >  2:6149626/1‑137 (MQ=255)
                                                                                                                                 aCCGCCCGCGCGGCAAACGATCTGGCAGGCGCTGCCCTATTGGAGGCGTACGCCCCGTCAAATTATCATCACGCCACTGTCGTAATCTGCCGACCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGt         >  1:5691643/1‑137 (MQ=255)
                                                                                                                                  ccgcccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTc        >  1:8004168/1‑137 (MQ=255)
                                                                                                                                   cgcccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCt       >  1:8823997/1‑137 (MQ=255)
                                                                                                                                      ccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgc    >  2:7860017/1‑137 (MQ=255)
                                                                                                                                      ccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgc    >  2:11880567/1‑137 (MQ=255)
                                                                                                                                      ccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCAAATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgc    >  2:17281261/1‑137 (MQ=255)
                                                                                                                                      ccgcGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGACGTACGCCCCGTCACATTATCATCACACCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgc    >  1:5962555/1‑137 (MQ=255)
                                                                                                                                       cgcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgct   >  2:15078/1‑137 (MQ=255)
                                                                                                                                       cgcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgct   >  2:15113/1‑137 (MQ=255)
                                                                                                                                       cgcgagACACACGCTTGGGAAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgct   <  2:7900189/137‑1 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTACTCTGCCGGCCACCTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:16007832/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:8008292/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:16876767/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:14690515/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:14201242/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:11070396/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:10958764/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:521610/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:4075525/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:5748218/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:1431948/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:7320180/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:8941708/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:11597558/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  2:11597533/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:9599111/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTCGTCTtgctg  >  2:7036365/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCAAATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:4235827/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACACCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCCCCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:2711233/1‑137 (MQ=255)
                                                                                                                                        gcgcgGCACAAGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTtgctg  >  1:4235783/1‑137 (MQ=255)
                                                                                                                                        |                                                                                                                                        
CGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTG  >  AE015451_phaM1/4344176‑4344448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑