| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 353,067 | A→G | intergenic (+34/+84) | hisF CDS (Imidazole glycerol phosphate synthase subunit HisF) → / ← cbcV CDS (choline _ betaine _ carnitine ABC transporter ‑ ATP binding subunit) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 353,067 | 0 | A | G | 99.7% | 1397.1 / NA | 374 | intergenic (+34/+84) | hisF CDS (Imidazole glycerol phosphate synthase subunit HisF)/cbcV CDS (choline _ betaine _ carnitine ABC transporter ‑ ATP binding subunit) | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (160/213); total (160/214) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 374 total aligned reads displayed.
TGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAG > AE015451_phaM1/352934‑353201 | tGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGc < 2:17031986/137‑1 (MQ=255) gCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCa > 1:6511800/1‑137 (MQ=255) cAGCGCGGTGTTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACGTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGATCGGGGCTGCTTTGCAGCACTTCGCGGGCACg > 2:12712650/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCTAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTGGCAGCCCTTCGCGGGCACg < 2:10830303/137‑1 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGTGGGCACg > 1:1749840/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCaag > 1:3264170/1‑135 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg < 1:14027048/137‑1 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg > 1:9080453/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg < 1:14627385/137‑1 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg < 1:3464451/137‑1 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg > 1:7889527/1‑137 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 2:1590785/137‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 1:11073211/137‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 1:210088/137‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 2:9126080/137‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 1:15435197/137‑1 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTTGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCt > 2:7381709/1‑137 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTTGCTGATCCCTTGACCGGGGTTGCTTTGCAGCCCTTCGCGGGCCAGCCCgat > 1:15648359/1‑135 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGTACGGCCGCt > 1:3586134/1‑137 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCctct > 1:8170106/1‑137 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCt > 2:15043604/1‑137 (MQ=255) ggTGCTGGCGGCCAGCAGCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCt < 2:6970888/137‑1 (MQ=255) gTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTc < 1:13063741/137‑1 (MQ=255) gTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTc < 1:16051044/137‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCcaca < 2:5434678/137‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCcaca < 1:10137279/137‑1 (MQ=255) gcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGTGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACTCCCACAg > 2:4339145/1‑137 (MQ=255) gcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACACCCCCCCCcccaaggt > 1:1001098/1‑133 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGTAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 1:4933565/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 1:16732907/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 1:16732962/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 2:8739426/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 1:13656881/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 2:3835943/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 2:2794276/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 1:11703495/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 1:450800/137‑1 (MQ=255) acATCCTCCACTTTGTCTATTCCACATTTCCGGATGCCAATGCCTACATGTCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCGGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCt < 2:8176323/136‑1 (MQ=25) cATCTTCCACTTTGGTGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCTGGATCGTCGTTCGCTGATCCATTGACCTGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTg < 2:14152226/137‑1 (MQ=38) cATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGGAAGCCCGATCCCCCCGGGTTGGTg > 1:1390933/1‑137 (MQ=255) cATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCCCAGGTTTTCTg > 1:12196128/1‑137 (MQ=255) cATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTg < 2:6068491/137‑1 (MQ=255) aTCTTCCGCTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 2:12313822/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGTCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 2:16204664/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 2:4630586/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 2:6509154/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:11273917/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:14326750/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:6605357/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:1133986/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:5323829/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:12838363/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:12619003/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 2:17523890/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:2630681/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 1:6011013/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGATGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga < 2:16647360/137‑1 (MQ=255) tCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTgcg > 1:12307897/1‑135 (MQ=255) ctgccACGTGGGCGAGTACACAGTGCCGGAGGCAAAGGCAGACAGGGCGTCGCGCGGGATCGGAGGTCGCTGATCCATGGACAGGGGCGGCTGGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTgaga < 2:4079802/134‑1 (MQ=19) cTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTgaga < 2:10098360/137‑1 (MQ=255) cACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGAtctc < 1:14908826/137‑1 (MQ=255) aCTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGTTGAGATctct > 1:13224005/1‑137 (MQ=255) ggCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCTGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTTGCTGAGATCTCTGTggg > 2:9663898/1‑137 (MQ=255) gCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTTGTTGAGATCTCTGTGGGAGCGGGCGTGCCcg > 2:8007392/1‑137 (MQ=255) gCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCAAAGGTTTGGTGGAGTCTATGTGGGAGCGGGCTTGCCcg > 2:12924801/1‑137 (MQ=37) gCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACTCCCACAGGTTTGCTGAGATCTCTGCGGGAGCGGGCGTGCCcg > 1:9912793/1‑137 (MQ=255) gAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTga > 2:4828393/1‑107 (MQ=255) gAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAAGTTTGTTGAGGCCTCTTTGGGAGCGGGCATGCCCACGaa > 1:5777820/1‑137 (MQ=37) aGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGaaa > 2:13621433/1‑136 (MQ=255) gCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCCCAAGGTTTCTGAGATCTCTGTGGGGGCGGGAGTGCCCGCGAAggg > 2:5743766/1‑137 (MQ=38) ggCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCCGTGGGAGCGGGCGTGCCCGCGAAGGGCcgcg > 2:11282966/1‑137 (MQ=255) ggCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCAAAGGTTTGATGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCcgcg > 2:3891899/1‑137 (MQ=255) ggCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGACCGCTCCCCCAGGTTTGTTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCcgcg > 2:17138288/1‑137 (MQ=255) ccTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTTCCACAGGTTTGCTGAGGTCTCTGTGGGAGCGGGCGTGCCCGCAAAGGGCCGCGaa > 2:11603120/1‑137 (MQ=255) gaCAGGGCTTTGCGTGGGATCGTCTTTCGCCGACCCGTTGACCGGGGTTGTTTTGAAGCCTTTCGCGGGCACGCCTGTTCCCACGGTTTTGTGGAGATCTTTGTGGGAGCGGGCGGGCCCGCGAAGGGCCGCGAAGc < 2:5183184/136‑1 (MQ=255) aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACACCCACTCCCCCAAGGTTGTTGGGGTCCCTGTGGGGGCGGGCGTGCCCCCGAAGGGCCGCGAAACgga > 1:9277957/1‑136 (MQ=25) tGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGACCCCTCCCAAAGGGTTGCCGGGGCCTATTTTGGGGAGGGCGTGCCCGCGAAGGGACTCGAAGCGGcc > 1:7492298/1‑137 (MQ=25) gttttCTCGCGGGATCTTTGTCCGCTGATCCGTGGACTGGGGTTGCTTGGCAGCCTTTCGTGGGCACGCCCTCTCCCACGGGTTTGCGGAGCTTTTTGTGGGAGAGGGCGTGCCCGCGAAGGGCCGCGAAGCGGccc < 2:2567970/134‑1 (MQ=19) ggtttCGCGCGGGATTGTTGTTCGCGGATCCATTGACCGGGGCTGTTTTGCATCCCTTCGTGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTTTGGGAGGGGGCGTGCCCGCGAAGGGCCGCGAAGCGGccc < 2:12078431/134‑1 (MQ=37) ggCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCCCTGTGGGAGCGGGCGTGCCCGAGAAGGGCCGCAAAGCGGccc > 2:7157798/1‑137 (MQ=255) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGNCCGCTCCCAAAAGGTTGGTGAGATCTCTGTGGGAGAGGGAGTGCCCCCGAAGGGCCGCGAAAAAGCCCCAAtt > 1:16279574/1‑137 (MQ=25) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCCCTCCCACAAGTTTGCTGAGAGCTCTGTGGGGGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAAtt > 1:17127656/1‑137 (MQ=38) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACTCCCACAAGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAACGGCCCaaact > 1:3932929/1‑135 (MQ=38) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACTCCCACAAGTTTGCTGAGAGCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGACCCaact > 1:11988842/1‑135 (MQ=38) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACCCCCACAAGTTTTCTTAGATCTCTGTGGGAGAGGGCGTGCCCGCGAAGGGACGCAAAGAGGCCCCaact > 1:2304589/1‑135 (MQ=37) gcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTg > 2:3453287/1‑137 (MQ=255) gggATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCCCGCCCGCTCCCACAGGTTTGTTGAGATCTCTGTGGGAGTGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTc > 2:13772854/1‑137 (MQ=38) tgtTCGCTGATCCATTGACTGGGGCTTCTTTGAAGCCTTTCGTGGCCACTCTCTCTCCCACGGGTTTGCTGAGATTTCTGTGGGGGTGGGCGGGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTgg < 1:7008700/136‑1 (MQ=25) tCGCTACTCCATTGCCCGGGGTTGCTTTGCGTCCCTTCGCGGGCGCGCCCGCTCCCACGGGTTTGCGGAGCCCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGTCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTc < 1:15093989/137‑1 (MQ=25) gATCCATGGACCGGGGCTGCTTTGCAGCTCTTCGCGGGCACGCCCGCTCCCACAGTTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGcc < 2:1480250/137‑1 (MQ=38) aTTGACCGGGGCTGCTTTGCAGCCCTTCGTGGGCATGCCCGCTCCCACAGGTTTGCTGAGATTTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGagca < 2:7638607/137‑1 (MQ=255) ggCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGGGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTTTTGCCGAGCAGCGCGTGGt > 2:14073927/1‑137 (MQ=255) ctgctTTGCAGCCCTTCGTGGGCACGCCCGATCCCAAGGGTTTGGTGGGATCTCTGTGGGAGCGGGCGTGCCAGCGAAAGGCCGAGAAGCGGCCACAAGTGCTTCAACCATGGTTCTTGCCGAGCAGCGCGTGGTaa > 2:16478097/1‑137 (MQ=255) ctgctTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGTTGAGATTTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTaa > 2:16220175/1‑137 (MQ=255) tgctTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCACAAAGGGCCGCGAAGCAGCCCCAACTGCTTCAACCGTGGTTCTTGCCAAGCAGCGCGTGGTaaa > 2:15651678/1‑137 (MQ=38) ttGCGGCCCTTTGAGGGCACACTCACTCCCACAGGTGTGCGAAAACCTCGGTGGGAAAGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCGTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTc < 2:1345983/137‑1 (MQ=21) cccTTCGCGGGCACGCCCGCTCCCACAGGTTTTCTGAGATCTCCGTGGGAGCGGGCGTGCCCACAAAAGGCCACGAAGCGGCCCCAACTGCTTCCAACGTGGTTCTTGCCCAGCAGCGCGTTGTAAAACTCGGTATc > 2:2159562/1‑137 (MQ=25) tttCGCGGGCACCCCCGCCCCCACGGTTTGGCTGAGCTCTTTGGGGGAGCGGGTGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATccc < 1:15147726/136‑1 (MQ=37) cTTCGCGGGCACGCCCGCTCCCACAGGTTTGCTAAAATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATccc < 1:13747957/137‑1 (MQ=255) gCAGACACACCCACCCCCCCAGGTTTGCGGAGCTCCCGGGGGGAGTGGGTGGGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCTTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAg < 2:1107160/137‑1 (MQ=255) | TGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAG > AE015451_phaM1/352934‑353201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |