| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 5,674,753 | G→C | intergenic (+115/+25) | rhlE‑II CDS (ATP‑dependent RNA helicase) → / ← yceI CDS (polyisoprene‑binding protein_ acidic stress response factor) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 5,674,753 | 0 | G | C | 99.9% | 2752.3 / NA | 685 | intergenic (+115/+25) | rhlE‑II CDS (ATP‑dependent RNA helicase)/yceI CDS (polyisoprene‑binding protein_ acidic stress response factor) | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (424/259); minor base T (0/1); total (425/260) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 685 total aligned reads displayed.
CCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GCGCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGT > AE015451_phaM1/5674625‑5674879 | gggCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAg > 1:13911030/1‑137 (MQ=255) cTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTg < 1:7349094/137‑1 (MQ=255) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAATGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTa < 2:3986318/137‑1 (MQ=255) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTa < 1:1687135/137‑1 (MQ=255) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTa < 2:11334375/137‑1 (MQ=255) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTa < 2:16846580/137‑1 (MQ=255) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTa < 2:16998653/137‑1 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACt > 1:13564903/1‑137 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACt > 1:6610152/1‑137 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACt > 1:10029683/1‑137 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACt > 2:9128785/1‑137 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGc > 2:10361599/1‑137 (MQ=255) gggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt < 1:11983823/137‑1 (MQ=255) gggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt < 1:10283295/137‑1 (MQ=255) gctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTc > 2:182634/1‑137 (MQ=255) gctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcaca > 2:13170664/1‑137 (MQ=255) cGCAGCCCTATCACGACACAATGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:17118848/137‑1 (MQ=38) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCATCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:3360833/137‑1 (MQ=38) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:5171402/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:15754436/137‑1 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GGCCCAATCGGTTTTCAGCTGGCAGAAGTTACTTCTGCTTCACACCTTCGaca > 1:15965236/1‑137 (MQ=38) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 2:3110480/137‑1 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 2:10580907/137‑1 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 1:17382441/137‑1 (MQ=255) cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtc > 2:2265960/1‑137 (MQ=255) cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTAAAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtc > 2:5323915/1‑137 (MQ=255) acaAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccagg > 1:7943052/1‑137 (MQ=255) acaAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccagg < 1:16218952/137‑1 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 2:4911645/1‑137 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 2:16620464/1‑137 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 2:13940028/1‑137 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 1:11382494/1‑137 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 1:11045812/1‑137 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 1:15605444/1‑137 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTATTGCTCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTCCTCCTGCTTCACACCTTCGACAATGATAtccaggt > 1:11527637/1‑137 (MQ=38) aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcc > 1:8538581/1‑137 (MQ=255) aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcc < 1:4618291/137‑1 (MQ=255) aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccagatcc > 2:14170059/1‑137 (MQ=255) cGCTCCTGCAGAGAATTTCTTGATCTCTACGGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAggg > 2:16427683/1‑137 (MQ=255) cGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCCGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAggg > 1:14703369/1‑137 (MQ=255) cGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAggg > 1:12805276/1‑137 (MQ=255) gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGt < 2:7440209/137‑1 (MQ=255) gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGt > 1:15064573/1‑137 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 2:1608985/137‑1 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat > 1:6940834/1‑118 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 2:559119/1‑137 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 1:15356785/1‑137 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 1:5016424/1‑137 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 1:13449112/1‑137 (MQ=255) tGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCg > 1:12315661/1‑137 (MQ=255) aaTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGc < 1:2974346/137‑1 (MQ=255) ttCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 2:7042874/107‑1 (MQ=255) cTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCg > 2:5065734/1‑137 (MQ=255) gATCTCTACATGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGTAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGc < 2:4093440/137‑1 (MQ=38) gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCAAGGGTCTGCGAAGTAGCACCCGGGc > 2:15260607/1‑137 (MQ=255) aTCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGcc < 1:11814045/137‑1 (MQ=255) cGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAg > 1:9682577/1‑137 (MQ=255) tccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc < 2:15622266/136‑1 (MQ=255) gCCTTGTTTCGTGATAGGGCCGCAAGGCGGCCCC‑CGCTGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc < 1:4410457/137‑1 (MQ=255) gCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc < 2:7753606/137‑1 (MQ=255) gCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc < 1:7460327/137‑1 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc > 1:9211073/1‑136 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 2:12655129/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:14109601/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 2:14866445/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:6252592/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTTCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:4230891/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccagg > 1:2325723/1‑90 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:3368240/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:2651961/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:8755410/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:13205968/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:6664792/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:10560791/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:6814003/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:1821137/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:2041355/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:3543839/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:16703429/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:3746479/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:11945536/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:11718882/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:13766071/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:8822542/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:3976019/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:4116805/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:14434202/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:679262/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACATTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:17499454/1‑137 (MQ=255) tgtgTCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttc < 2:12450209/137‑1 (MQ=255) tgtCGTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGacac > 2:6141067/1‑76 (MQ=38) gTGATAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttc < 2:14472610/137‑1 (MQ=255) tAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:6100051/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:5723763/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 2:4701084/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 2:817025/1‑137 (MQ=255) ccGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 1:8127635/137‑1 (MQ=255) ccGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 2:13514637/137‑1 (MQ=255) ccGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 1:12556907/137‑1 (MQ=255) ccGCAAAGCGGCCCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg > 2:9476875/1‑137 (MQ=255) | CCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GCGCC‑CTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGT > AE015451_phaM1/5674625‑5674879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |