| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 1,932,640 | +C | intergenic (‑107/+43) | rluA CDS (23S rRNA (746) and tRNA (32) pseudouridine synthase) ← / ← minE CDS (Cell division topological specificity factor) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 1,932,638 | 1 | . | C | 92.0% | 1556.5 / 132.0 | 450 | intergenic (‑105/+45) | rluA CDS (23S rRNA (746) and tRNA (32) pseudouridine synthase)/minE CDS (Cell division topological specificity factor) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (34/1); new base C (235/169); total (280/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.33e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 475 total aligned reads displayed.
TCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTG‑CCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAT > AE015451_phaM1/1932502‑1932769 | tCGAAGAGGATCTGGACATTCGCCAGCGGCATTGCAGGTCTCACGAAAATAGTAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTCCCAAAGATGTGCGTCCCATGTAGGAG‑T‑GGGA‑TTg > 2:17781691/1‑137 (MQ=38) aaGAGGATTTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCGGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGAGATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTG‑ccc < 2:813316/137‑2 (MQ=255) agagGATTTGGACATTCGACAGTGGCGTTGCAGTTCTCACGAAAATAGCAGGAAACGTTGGGGCCGTTTTGTGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCTTCCCTTGTAGGAG‑C‑GGGC‑TTG‑cccg < 1:4277664/137‑3 (MQ=25) gagGATCTGGACGTTCGACAGCGGCATTGAAGGTCTAAAGAAAACAACAGGAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATTTGTCCCCTGTAGGAG‑C‑GGGC‑TTG‑cccgc < 2:18560253/137‑4 (MQ=37) agGATTTGGACATTCAACAGCGGCATTGAAGTTCCCACGAAAATAGCAGGAAACGCTGGGGCTGCTTTGCGGCCCTTTGCGGGCAAGCCCGCTCCTACAAAGGATATTCGTCCCCTGTAGGGG‑C‑GGGC‑TTG‑cccgcg < 1:3450717/137‑5 (MQ=255) agGATCTGGACATTAGACAGCGACATTGCAGGTCCTACGAAAACAGCAGTAAACACGGGGGCCGCTTTGCGGCCCTTCGCGGACAGGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑C‑GGGC‑TTG‑cccgcg < 1:15888640/137‑5 (MQ=255) agGATCTGGAAATTCGACAGCGGAATTGCAGGTCTCACGAAAAGAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATGTGCGTCCCCTGTAGGAG‑C‑GGGC‑TTG‑cccgcg < 1:17926073/137‑5 (MQ=38) agGACCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGTTTTGCGGCCCTTCGTGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTG‑cccgcg < 2:2421455/137‑5 (MQ=255) cTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAggg < 2:8376807/137‑1 (MQ=255) cTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCACTCCTACAAAAGATGTGCGTCCCCTGTAGGGG‑A‑GGGA‑TTGTCCGCAAAggg > 2:6944439/1‑137 (MQ=38) cTGGACATTCGACAGCGGCATGGAAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAggg < 1:3950348/137‑1 (MQ=38) cTGGACATTCGAAAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAggg < 1:5871378/137‑1 (MQ=255) cATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGTGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCa < 2:8837052/137‑1 (MQ=255) cATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCa < 2:3873241/137‑1 (MQ=255) aTTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCACGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCaa > 2:7704590/1‑137 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCCAGACCGCTCCTACAAAAGACATGGGTTCACCGTAAGAG‑C‑GGGG‑TTGTCCTCGAAGGGGTGCAAGGCAg > 2:7169594/1‑137 (MQ=255) ggCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGGAAACCCACTCCTCCAAAAGATAGGTATCCCCCGTAGGAGAA‑GGGT‑TTT‑CCGCGAAGGGATGCAAGGGAGacccc > 1:11468793/1‑136 (MQ=255) ggCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCACCCCTACAAAAGATATGCGTCCCCCGTAGGAG‑C‑GGGCTTTC‑CCACGAAGGGCTGCAAAGAAGCCCCa > 2:11125882/1‑137 (MQ=37) ggCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGACCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑A‑GGGT‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCa > 2:16244343/1‑137 (MQ=38) ggCATTGCAGGTCTAACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGTGGGCAAAACCAATCCCCAAAAGGACATGCGTCCCCCGGAGGGG‑G‑GGGC‑TTGCCCTCGAAGGGATTCCAGGCAGCCCCa > 1:2503221/1‑137 (MQ=255) tGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCACGGGCAAGCCCGCTCCTCCAAAGGATATGCGTCCCCCGTAGGAG‑C‑GGGC‑TTGCCCACGAAGGGCTGCAAGGCAGCCCCAAATTg > 2:14280131/1‑137 (MQ=39) tctcACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACt < 2:13857150/137‑1 (MQ=255) tctcACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACt < 2:12424251/137‑1 (MQ=255) tcccACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGTGGACAAGCCCGCTCCCACAAAGGATATGCTTCCCCTGTAGGAG‑C‑GGGC‑TTTCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACt < 1:6393492/134‑1 (MQ=38) aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCACTCCTCCAAAAGATATGCATCCCCTGTAGGAG‑CGGGGT‑TTC‑CCACGAAGGGCTGTAAAGCAACCCCAAACTGTCGACtccac > 2:15437441/1‑133 (MQ=25) aaaaTAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGAAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTTGAATACGCGGa > 2:11524081/1‑137 (MQ=38) aagtAGAAGGAAACGTGGGGTCCGTTTTGCGGCCCTTTGGGGGAAAACCCGCTCCGACAAAGGATATGCGCCCCTTGTAGGAG‑C‑GGGC‑TTCCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGAt < 1:6198423/134‑1 (MQ=21) gagaaGTAAACGTTGGGGCCGTTTGGCGTCCCTTCGTGGACAATCCCGCTCTTACAAAGGATGTGCGCCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAg < 1:992/133‑1 (MQ=25) aGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCCCCTCCAAAGGAGATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCCAGGCAGCCCCAAATTGTCGAATACGCGGATCCGc > 2:11967868/1‑137 (MQ=37) gCAGTAAACGCTGGGGCCGCTTTGCGGCCCGTCGCGGGCAAGCCCGCTCCTACGAAGGATATGCGTCCCCCGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCg < 2:13310106/137‑1 (MQ=38) gCAGGAAACGCTGGGGCCGTTTTGCGGCCCTTCGCGGGCAAGCCTGCTCCGACAAAGGATGTGCGTCCCCTGTAGGAG‑A‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCg < 2:2762532/137‑1 (MQ=38) aGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCACGATCCTACAAAGGATATGGGTCCCCGGTAGGAG‑C‑GGGT‑TTGCCCGCGAAGGGATGCAAAGCAGAACCAAATTGTCGACCACGAGGAGCAGAGAt > 2:4601584/1‑137 (MQ=21) tAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGAAAGCCCGCTCCCCCAAAGGAGATGTGTCCCCTATAGGAGAA‑GGGT‑TTC‑CCACGAAGAGCTGCAAAGAAACCCCAAACTGTCTACTCCGCGGATCAACGAccc > 1:12036189/1‑137 (MQ=255) aaaCGTTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGGAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 1:816929/137‑1 (MQ=38) cGCTGGGGCCGTTTTGCGGCCTTTCGCGGGCAAGCCTTCTCCTACAAGGGATGTGCGTCCCCTGGAGGAG‑C‑GGGT‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCa < 1:9108764/137‑1 (MQ=38) ccGTTTTGTGTCCCTTCGGGGGCAATCCCGTTCTTCCAAAGGATGTGCTTCCCCTGTGGGGG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATg < 1:4444462/137‑1 (MQ=25) cGCTTTGCGGCCCTTCGTGGGCAAGCCCGCTTCTACAAAGGATGTTTGTCCCCTGTGGGGG‑C‑GGGC‑TTGCCCGCGAAGGGTTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGgtgt > 2:18187676/1‑137 (MQ=37) ttGCGGCCCTTCGTGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCTTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAg < 1:13039380/137‑1 (MQ=255) ttGCGGCCCTTCGCGGGCAATCCCGCTCCTAAAAAGGATATGTTCCCCCTGGAGGAG‑T‑GGTC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAg < 1:148114/137‑1 (MQ=255) ttGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATGTGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAg < 1:6934187/137‑1 (MQ=255) ttGCGCCCCTTAGCGGGCAAGCCCGCTCCTAAAAGGGGTGTGCGTCCCCTGGAGGAG‑C‑GGGT‑TTTCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAg < 1:10363972/137‑1 (MQ=255) tggCGGCCCTTTGCGGGCAAGCCCGCTCCTACAAGGGATATGCGTCCCCTGTAGGGG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAg < 2:5941360/135‑1 (MQ=38) cTTCGCGGGCAATCCCGCCCCTACAAAGGATATGCGTCCCCTTTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGaa < 1:8086286/137‑1 (MQ=39) cTTCGCGGGCAAGCCCGTCCCTACAAAGGATGTGTTTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGaa < 1:9377912/137‑1 (MQ=38) gcgGGCAAGCCCTCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGa < 2:14427962/137‑1 (MQ=255) cgGGCAAGCCCGCTCTTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGT‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGag < 2:1113641/137‑1 (MQ=255) aGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTg < 1:13681518/137‑1 (MQ=255) ccGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGccc < 2:1520876/137‑1 (MQ=255) cGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCt > 2:10410918/1‑137 (MQ=255) tACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtttt > 2:9399915/1‑137 (MQ=255) aaaGGATATGCGTCCCCTTTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCa < 2:11331535/137‑1 (MQ=255) aaGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAg > 1:15555647/1‑137 (MQ=255) aaGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAg > 2:11847654/1‑137 (MQ=255) aaGGATATGCGTCCCCTGGAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAg < 2:13053095/137‑1 (MQ=255) agaatatGCTTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCTAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc < 1:8662288/134‑1 (MQ=39) aGGGTATGCTTCCCTTGTAGGAG‑C‑GGGC‑TGGCCCGCGAAGGGCTGTAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCatc < 1:16353680/137‑3 (MQ=255) aGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc < 2:7975234/137‑1 (MQ=255) aGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc > 2:157278/1‑137 (MQ=255) atatGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAGGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCg < 2:9733370/137‑1 (MQ=255) tatGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGa > 2:3950440/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 1:10564411/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 1:13574824/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 2:2040316/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 1:10789658/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:2915522/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:10773776/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCACTGGTTTTCCAGCTCGatat > 2:13471350/1‑137 (MQ=255) cGTCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATg > 1:5278299/1‑137 (MQ=255) tCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGca > 1:1682658/1‑137 (MQ=255) tCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGca > 2:16574978/1‑137 (MQ=255) tCCCCTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGca > 1:15747842/1‑137 (MQ=255) ccTGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcat > 2:5206240/1‑137 (MQ=255) tGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGNTACAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCNGCCCNGGTTTTCCAGCTCGATATGCAcatca > 2:64796/1‑137 (MQ=255) tGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:6174369/1‑137 (MQ=255) tGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:18522580/1‑137 (MQ=255) tGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:4679212/1‑137 (MQ=255) tGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:16057456/1‑137 (MQ=255) tGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:776510/1‑137 (MQ=255) tGTAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:6771286/1‑137 (MQ=255) tAGGAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACatcatc > 2:17484788/1‑137 (MQ=255) gAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt < 1:9708037/137‑1 (MQ=255) gAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 1:13210983/1‑137 (MQ=255) gAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 1:14993944/1‑137 (MQ=255) gAG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGtt > 1:17234758/1‑137 (MQ=255) aG‑C‑GGGT‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGTTTTTCCAGCTCGATATGCACATCATCGTTg < 1:8354628/137‑1 (MQ=255) aG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTg < 1:12955403/137‑1 (MQ=255) aG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTg < 2:14753206/137‑1 (MQ=255) aG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTg < 1:303949/137‑1 (MQ=255) aG‑C‑GGGC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTg < 2:9091527/137‑1 (MQ=255) ggC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGa > 1:14537101/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTcc < 1:17331824/108‑1 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:3310521/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt < 1:12480971/137‑1 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:13920272/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:5445587/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:5007430/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:3154683/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:7329424/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:12787046/1‑137 (MQ=255) gC‑TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCAGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:14076625/1‑137 (MQ=255) | TCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑C‑GGGC‑TTG‑CCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAT > AE015451_phaM1/1932502‑1932769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |