| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 CDS (putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase) ← / ← PP_3395 CDS (Transcriptional regulator_ LysR family) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 3,845,703 | 1 | . | G | 97.4% | 1519.0 / 28.0 | 386 | intergenic (‑70/+28) | PP_3394 CDS (putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase)/PP_3395 CDS (Transcriptional regulator_ LysR family) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (2/8); new base G (292/84); total (294/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 425 total aligned reads displayed.
GCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑GGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAA > AE015451_phaM1/3845567‑3845832 | gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcg‑c < 2:6895572/137‑1 (MQ=255)gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcg‑c < 1:8237438/137‑1 (MQ=255)gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCAACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTcg‑c < 1:16929077/137‑1 (MQ=255) aTGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gg > 2:1100925/1‑137 (MQ=255) aTGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gg > 1:2495412/1‑137 (MQ=255) aTCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑gggct < 2:10714837/137‑4 (MQ=255) aCTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GAt > 2:13143528/1‑137 (MQ=255) tGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCa < 1:12264471/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTc < 1:10420869/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTc < 1:16356925/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTc < 1:8074813/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTc < 2:5864284/137‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTc < 2:11598405/137‑1 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAg > 2:11962557/1‑137 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAg > 2:6531466/1‑137 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAg > 1:4499890/1‑137 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:930692/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:9680557/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 2:11404350/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:6198842/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:3213332/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 2:14322352/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:13452202/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:18184119/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:11477434/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 1:17683676/137‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGAGTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 2:16369750/137‑1 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCa > 1:18276886/1‑137 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCa > 1:8611836/1‑137 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACg > 1:16663022/1‑137 (MQ=255) aGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGa > 1:2141002/1‑137 (MQ=255) cgcgCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATc > 1:13198438/1‑137 (MQ=255) gccggCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGAAGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGc > 2:2273331/4‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGc > 2:15837126/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGc > 1:12672978/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGc > 1:5702535/1‑137 (MQ=255) gcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GACCCCTCATCAGCCACGATGGagcagc > 1:4757489/1‑137 (MQ=255) aGGCCGACTTCGTGGGTTGGTATTGTTGTAATCGCGGCCCCTCTTCCTGAGGCGTTTCGCCAGACTAAGAGTTGGATGACGGGCAGAAAAGACTTGTTTAG‑CGGGCT‑GATCCACCGCCAGCCAAGAGGGATAAAccc < 2:13487102/137‑1 (MQ=255) ccGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCcgcg > 1:3421546/1‑137 (MQ=255) cGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCgcgc > 1:10006767/1‑137 (MQ=255) tattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTACGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGc > 2:5665279/1‑137 (MQ=255) tattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GCTCCATCGTCAGCCACGATAGATCAGCCCGCGCCCTGCCAGGCCGGTGc > 2:12899461/1‑137 (MQ=255) tattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGc > 1:10615287/1‑137 (MQ=255) tattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGc > 1:8856125/1‑137 (MQ=255) attgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCa > 2:12629087/1‑137 (MQ=255) tgttgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACg > 2:9475074/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:5506528/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:7631177/1‑137 (MQ=255) aTCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAc > 2:1051954/1‑137 (MQ=255) cgcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAg > 2:15473511/1‑137 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑TATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAgg > 1:3682157/1‑137 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAgg > 1:7034695/1‑137 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAgg > 2:13327804/1‑137 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCAAGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAgg > 2:8309164/1‑137 (MQ=255) aGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccg > 1:10858867/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCNTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:17194907/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:2023341/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:14900438/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:6262902/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:9982710/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:6373438/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:2568845/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAAAAGTGGTCAAGCAGGCgccgag > 2:2843813/1‑137 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCAGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 1:5415101/1‑137 (MQ=255) ttGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagcc > 1:7685626/1‑137 (MQ=255) ttGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGAAGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCCAGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagcc > 2:12249718/1‑137 (MQ=255) tGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagccg > 1:4817392/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:1781191/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:3819834/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:4847161/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:3118032/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:15077518/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:5108874/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:14018483/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 1:1441735/1‑137 (MQ=255) gcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa > 2:89453/1‑137 (MQ=255) cAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGc > 2:17928725/1‑137 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCCAGCAGGCGCCGAGCCGACAACGAGAGCgtgt > 1:12050569/1‑137 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCgtgt > 2:5117088/1‑137 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCgtgt > 2:14014688/1‑137 (MQ=255) ggATGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc > 2:4506181/1‑137 (MQ=255) aTGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAACCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCgg > 1:14625039/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCGTG‑GGCT‑GATCCATCGTCAGCCAAAATGGATCAGCACGAGCCATGCCAAGCCGGTGCACGCAACAAACGATGGTCAAGTAGGCGCCGAGCCGAAAGAAAGAGCGTGTGCCGGt > 1:11129722/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCANCAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 1:15083444/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 2:18247043/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 1:7284592/1‑137 (MQ=255) tGACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACACAGCCACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGt > 2:17364686/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGcc < 2:18314596/45‑1 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCCGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 2:16755581/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGGGCGTGTGCCGGTc > 1:17849192/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 1:3566381/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 1:7903187/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 1:4286505/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAAAAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 1:4215184/1‑137 (MQ=255) gACGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAACCACGATGGATCAGCCCGCACCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGCCAGCGAGAGCGTGTGCCGGTc > 2:16018711/1‑137 (MQ=255) aCGGGCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcg > 1:1562360/1‑137 (MQ=255) ggCAAAAAAAAGGTTTTTTG‑C‑GGTTGGGTCCATCGCAAGCCACGAGGGACCGCCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCgcgc < 2:10127557/137‑1 (MQ=255) gCAGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa > 2:6993775/1‑137 (MQ=255) aGAAAAGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATg > 2:1886634/1‑137 (MQ=255) aaaGACGTGTTTCG‑CGGGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAg > 2:4210823/1‑137 (MQ=255) | GCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTCG‑C‑GGCT‑GATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAA > AE015451_phaM1/3845567‑3845832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |