| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 1,738,086 | Δ40,059 bp | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | 60 genes [PP_1532 CDS (putative Phage integrase)], PP_1533 CDS (putative Excisionase), PP_1534 CDS (conserved protein of unknown function), PP_1535 CDS (putative Methyltransferase), PP_1536 CDS (conserved protein of unknown function), PP_1537 CDS (conserved protein of unknown function), PP_5472 CDS (conserved exported protein of unknown function), PP_1538 CDS (conserved protein of unknown function), PP_1539 CDS (conserved protein of unknown function), PP_1540 CDS (conserved protein of unknown function), PP_1541 CDS (putative Methyltransferase), PP_1542 CDS (conserved protein of unknown function), PP_1543 CDS (conserved protein of unknown function), PP_1544 CDS (conserved protein of unknown function), PP_1545 CDS (conserved protein of unknown function), PP_1546 CDS (conserved protein of unknown function), PP_5473 CDS (putative transcriptional regulator_ LuxR family), PP_5474 CDS (conserved protein of unknown function of phage origin), PP_1548 CDS (conserved protein of unknown function), PP_5744 CDS (conserved protein of unknown function_ phage origin), PP_1549 CDS (Transcriptional regulator_ Cro_CI family), PP_1550 CDS (Transcriptional regulator_ Cro_CI family), PP_1551 CDS (putative Phage replication protein O), PP_1552 CDS (putative Phage replication protein), PP_1553 CDS (conserved protein of unknown function), PP_1554 CDS (conserved protein of unknown function), PP_1555 CDS (putative Phage integrase), PP_1556 CDS (conserved protein of unknown function), PP_1557 CDS (conserved protein of unknown function), PP_1558 CDS (conserved protein of unknown function), PP_1559 CDS (Holin), PP_1560 CDS (conserved protein of unknown function), PP_1561 CDS (putative Phage holin), PP_1562 CDS (putative Phage terminase_ small subunit), PP_1563 CDS (putative Phage terminase_ large subunit), PP_1564 CDS (conserved exported protein of unknown function), PP_1565 CDS (Phage portal protein_ HK97 family), PP_1566 CDS (Peptidase U35), PP_1567 CDS (Capsid protein), PP_1568 CDS (conserved protein of unknown function), PP_1569 CDS (conserved protein of unknown function), PP_1570 CDS (Head‑tail adaptor), PP_1571 CDS (conserved protein of unknown function), PP_1572 CDS (conserved protein of unknown function), PP_1573 CDS (putative Major tail protein), PP_1574 CDS (conserved protein of unknown function), PP_1575 CDS (conserved protein of unknown function), PP_1576 CDS (putative Immunity protein), PP_1577 CDS (Phage tail tape meausure protein_ lambda family), PP_1578 CDS (conserved protein of unknown function), PP_5475 CDS (conserved protein of unknown function), PP_1579 CDS (conserved protein of unknown function), PP_1580 CDS (conserved protein of unknown function), PP_1581 CDS (BNR domain protein), PP_1582 CDS (conserved protein of unknown function), PP_1583 CDS (putative Structural protein P5), PP_1584 CDS (conserved protein of unknown function), PP_5476 CDS (conserved protein of unknown function), PP_1585 CDS (putative Antidote protein), [PP_1586 CDS (putative Killer protein)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 1738086 | 1778144 | 40059 | 909 [0] | [0] 907 | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | [PP_1532 CDS (putative Phage integrase)],PP_1533 CDS (putative Excisionase),PP_1534 CDS (conserved protein of unknown function),PP_1535 CDS (putative Methyltransferase),PP_1536 CDS (conserved protein of unknown function),PP_1537 CDS (conserved protein of unknown function),PP_5472 CDS (conserved exported protein of unknown function),PP_1538 CDS (conserved protein of unknown function),PP_1539 CDS (conserved protein of unknown function),PP_1540 CDS (conserved protein of unknown function),PP_1541 CDS (putative Methyltransferase),PP_1542 CDS (conserved protein of unknown function),PP_1543 CDS (conserved protein of unknown function),PP_1544 CDS (conserved protein of unknown function),PP_1545 CDS (conserved protein of unknown function),PP_1546 CDS (conserved protein of unknown function),PP_5473 CDS (putative transcriptional regulator_ LuxR family),PP_5474 CDS (conserved protein of unknown function of phage origin),PP_1548 CDS (conserved protein of unknown function),PP_5744 CDS (conserved protein of unknown function_ phage origin),PP_1549 CDS (Transcriptional regulator_ Cro_CI family),PP_1550 CDS (Transcriptional regulator_ Cro_CI family),PP_1551 CDS (putative Phage replication protein O),PP_1552 CDS (putative Phage replication protein),PP_1553 CDS (conserved protein of unknown function),PP_1554 CDS (conserved protein of unknown function),PP_1555 CDS (putative Phage integrase),PP_1556 CDS (conserved protein of unknown function),PP_1557 CDS (conserved protein of unknown function),PP_1558 CDS (conserved protein of unknown function),PP_1559 CDS (Holin),PP_1560 CDS (conserved protein of unknown function),PP_1561 CDS (putative Phage holin),PP_1562 CDS (putative Phage terminase_ small subunit),PP_1563 CDS (putative Phage terminase_ large subunit),PP_1564 CDS (conserved exported protein of unknown function),PP_1565 CDS (Phage portal protein_ HK97 family),PP_1566 CDS (Peptidase U35),PP_1567 CDS (Capsid protein),PP_1568 CDS (conserved protein of unknown function),PP_1569 CDS (conserved protein of unknown function),PP_1570 CDS (Head‑tail adaptor),PP_1571 CDS (conserved protein of unknown function),PP_1572 CDS (conserved protein of unknown function),PP_1573 CDS (putative Major tail protein),PP_1574 CDS (conserved protein of unknown function),PP_1575 CDS (conserved protein of unknown function),PP_1576 CDS (putative Immunity protein),PP_1577 CDS (Phage tail tape meausure protein_ lambda family),PP_1578 CDS (conserved protein of unknown function),PP_5475 CDS (conserved protein of unknown function),PP_1579 CDS (conserved protein of unknown function),PP_1580 CDS (conserved protein of unknown function),PP_1581 CDS (BNR domain protein),PP_1582 CDS (conserved protein of unknown function),PP_1583 CDS (putative Structural protein P5),PP_1584 CDS (conserved protein of unknown function),PP_5476 CDS (conserved protein of unknown function),PP_1585 CDS (putative Antidote protein),[PP_1586 CDS (putative Killer protein)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 1738085 | 0 (0.000) | 907 (1.090) | 125/270 | 0.2 | 100% | intergenic (‑67/+1) | yffB CDS (putative glutathione‑dependent thiol reductase)/PP_1532 CDS (putative Phage integrase) | –/– |
| ? | AE015451_phaM1 | 1778145 = | 0 (0.000) | intergenic (‑1/‑196) | PP_1586 CDS (putative Killer protein)/PP_1587 CDS (NhaP‑type Na+_H+ and K+_H+ antiporters) | –/– | |||||
Only 100 of 907 total aligned reads displayed.
TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG < 1:11035252/137‑1 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG > 1:1001127/1‑137 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG > 2:13645770/1‑137 TACGCGCCTTTTTCATGGTGTCACAGGCTCTGACGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAGCCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAA > 2:17497754/1‑137 CCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTAT < 1:14673956/137‑1 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 2:13013179/1‑137 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 1:15479890/1‑137 TTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTT < 1:16800053/137‑1 GTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGA < 1:6977172/137‑1 GGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATAC < 2:15418591/137‑1 CTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGA < 2:10258419/137‑1 TTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACG > 2:14803435/1‑137 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:1060283/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:1789694/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:5201058/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:13865568/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:10470153/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:11834781/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCGCCCCAATATCTCCCAAAAATTAGTCGCAGGGGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:6669316/137‑1 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 1:17491551/1‑137 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 2:9728231/1‑137 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 1:5024674/1‑137 ATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGA < 1:14026319/137‑1 ATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGA > 2:12748345/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 2:6369516/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 1:9201512/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 1:7241264/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 2:2910557/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 2:1247319/1‑137 AAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGT > 2:1425361/1‑137 AAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGT > 1:2334655/1‑137 AAGAGTGTAAGTCATTGAATTTAAATGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTA < 1:8787394/137‑1 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG > 1:18562912/1‑137 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG < 2:18006144/137‑1 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG < 1:3361918/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 2:12109979/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 2:15672659/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 2:8936005/137‑1 GTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAA < 2:15214717/137‑1 GTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAA < 1:8131942/137‑1 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:10713176/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:5993059/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:8390298/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:1202820/1‑137 AGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCAAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTC > 1:12259143/1‑137 GTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCT > 2:6897785/1‑137 TTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAA < 2:8045585/137‑1 GAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATA > 1:17315413/1‑137 GAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATA > 2:8300793/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:13843271/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:10832940/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 2:946358/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:458996/1‑137 GGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACG < 2:3479178/137‑1 TGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACT < 2:7066330/137‑1 GGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTC < 2:17794846/137‑1 GGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCG > 2:4055683/1‑137 GGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCG > 2:9816394/1‑137 TTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATGAGGCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTGCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAGTAACGGGCACGCGACTTGCAA < 2:5019474/137‑1 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTCACGTTATTCGTTAATTTCGCTTATCCGCCGGGGTCGCTGTAGTTCCAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC > 2:8577159/1‑137 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC < 2:44843/137‑1 CCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATATGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCG > 2:3852809/1‑137 CCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCG > 2:1842097/1‑137 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 2:10042116/137‑1 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 2:11388697/137‑1 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 2:7248833/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 2:10969673/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 1:14450811/137‑1 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 1:7367986/1‑137 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 1:2759992/1‑137 CCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACAT < 1:11485628/137‑1 CCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACAT < 1:15975944/137‑1 CCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACAT < 2:16216891/137‑1 CTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATC < 1:14941269/137‑1 CCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTG > 1:13106593/1‑137 CCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTG > 1:15220117/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 1:12889365/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG < 1:7736281/137‑1 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:5770944/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:7748368/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAACGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:16700771/1‑137 ATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTA < 1:18237729/137‑1 ATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTA < 2:2457831/137‑1 CTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATC < 1:16639099/137‑1 CCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATC < 1:4191668/137‑1 acAAATCAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGCTAACTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:15972372/3‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:6263834/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:9482108/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:13499967/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:12509951/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:14285933/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT < 1:5747984/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:5255857/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:16212508/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:2072414/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:3876178/1‑137 ATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTA > 1:11833274/1‑137 atTCGCATGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACAT < 2:1645546/135‑1 GCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTC > 2:6099203/1‑137 GGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTAAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCC < 2:17169703/137‑1 TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |