BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451_phaM1	= 1780066	283 (0.340)	158 (0.200)	62/256	4.4	42.7%	intergenic (+25/+81)	PP_1587 CDS (NhaP‑type Na+_H+ and K+_H+ antiporters)/dapC CDS (N‑succinyl‑L_L‑diaminopimelate aminotransferase alternative)	–/–
*	?	AE015451_phaM1	1780129 =	156 (0.200)	158 (0.200)	62/256	4.4	42.7%	intergenic (+88/+18)	PP_1587 CDS (NhaP‑type Na+_H+ and K+_H+ antiporters)/dapC CDS (N‑succinyl‑L_L‑diaminopimelate aminotransferase alternative)	–/–
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 314 total aligned reads displayed.

GCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451_phaM1/1779925‑1780066

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGC  >  AE015451_phaM1/1780129‑1780264

GCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGC                                                                                                                                               >  2:8989511/1‑137

GCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGC                                                                                                                                               >  1:10855735/1‑137

GCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGC                                                                                                                                               >  2:11797246/1‑137

  GCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGG                                                                                                                                             <  2:1024283/137‑1

    AGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGC                                                                                                                                           >  2:17353487/1‑137

    AGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGC                                                                                                                                           >  1:16121586/1‑137

    AGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGC                                                                                                                                           <  1:923191/137‑1

     GCGGTTGGAGCTGTACAACCTGCATCGTCATCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCG                                                                                                                                          <  1:5786506/137‑1

     GCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCG                                                                                                                                          <  2:12930975/137‑1

      CGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGT                                                                                                                                         >  1:15269835/1‑137

      CGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGC                                                                                                                                               <  2:1481775/131‑1

           GGAGCTGTACAACCTGCATCGTCAGCACCTGGTGTGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCG                                                                                                                                    <  2:11451221/137‑1

           GGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCG                                                                                                                                    <  1:3454194/137‑1

                TGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAG                                                                                                                               <  1:1632311/137‑1

                TGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAG                                                                                                                               <  1:11569875/137‑1

                     AACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTT                                                                                                                          >  2:10504991/1‑137

                     AACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTT                                                                                                                          >  1:14525143/1‑137

                     AACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTT                                                                                                                          >  1:5664834/1‑137

                        CTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGAT                                                                                                                       <  1:13649638/137‑1

                           CATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAG                                                                                                                    <  2:4089694/137‑1

                             TCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCG                                                                                                                  >  2:8125225/1‑137

                               GTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGT                                                                                                                >  1:17548762/1‑137

                               GTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTAGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGAGGT                                                                                                                >  1:6890540/1‑137

                                     ACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCA                                                                                                          <  2:775977/137‑1

                                                  TGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGATTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAAT                                                                                             <  2:142064/137‑1

                                                   GAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATG                                                                                            >  2:1088623/1‑137

                                                       TGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCT                                                                                        >  1:7215807/1‑137

                                                       TGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCT                                                                                        >  2:15904097/1‑137

                                                       TGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCT                                                                                        >  2:15654159/1‑137

                                                            CGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCC                                                                                   >  1:14877406/1‑137

                                                             GGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCAGTTTTGCAAGAAGGCGCGAATGCGCTCCGCCG                                                                                  >  1:13268624/1‑137

                                                                AAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCATGAAGGCGCGAATGCGCTCCGCCGCTT                                                                               <  1:7488651/137‑1

                                                                AAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTT                                                                               <  2:17598289/137‑1

                                                                AAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTT                                                                               <  2:4655441/137‑1

                                                                AAGTACTGGGTAAGCTGGATATGAGTGATGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAATGCGCGAATGCGCTCCGCCGCTT                                                                               <  2:4560909/137‑1

                                                                     CTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATG                                                                          <  1:6253551/137‑1

                                                                           GAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCG                                                                    >  2:7862571/1‑137

                                                                            AGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGG                                                                   >  1:8633477/1‑137

                                                                            AGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGG                                                                   >  1:4997306/1‑137

                                                                               TGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGG                                                                   <  2:4280230/137‑1

                                                                                 GATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGC                                                              <  1:9536310/137‑1

                                                                                 GATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGC                                                              <  1:12538577/137‑1

                                                                                     TGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTG                                                          >  1:1513184/1‑137

                                                                                             GCGAACCTGGGTTCAGTCA‑‑‑AGTAGATCCTATTAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTGGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGT                                                  <  2:6066817/137‑1

                                                                                              CGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCCTTCGGCCAGCGGTGCCACCAGTG                                                 >  1:4383752/1‑137

                                                                                              CGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTG                                                 >  2:7027765/1‑137

                                                                                              CGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTG                                                 >  2:9595779/1‑137

                                                                                              CGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTG                                                 >  2:15601202/1‑137

                                                                                                AACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCC                                               >  2:10352706/1‑137

                                                                                                          CAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGC                                     <  1:781596/137‑1

                                                                                                          CAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGC                                     <  1:18136819/137‑1

                                                                                                          CAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGC                                     <  1:11493893/137‑1

                                                                                                             TCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCC                                  <  2:8633477/137‑1

                                                                                                             TCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCC                                  <  1:1938677/137‑1

                                                                                                                    GTAGACCCTATCAAGGCCCTTCGCGGGCGTGTCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGC                              <  1:17724039/137‑1

                                                                                                                    GTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGC                              <  1:16867673/137‑1

                                                                                                                    GTAGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGC                              <  1:3820131/137‑1

                                                                                                                      AGACCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCAC                            >  1:2237348/1‑137

                                                                                                                         CCCTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCG                         <  2:213600/137‑1

                                                                                                                           CTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGG                       <  1:12404564/137‑1

                                                                                                                           CTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGG                       >  2:137160/1‑137

                                                                                                                           CTATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGG                       <  2:1520637/137‑1

                                                                                                                             ATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGTGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTT                     >  1:11743244/1‑137

                                                                                                                             ATCAAGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTT                     >  1:11272646/1‑137

                                                                                                                                 AGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACC                 >  2:3935066/1‑137

                                                                                                                                 AGGCCCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACC                 >  2:16551422/1‑137

                                                                                                                                     CCTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCNTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCAT             >  1:16076622/1‑137

                                                                                                                                      CTTCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATC            >  1:557332/1‑137

                                                                                                                                         CGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCAC         >  2:18260823/1‑137

                                                                                                                                          GCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACT        <  2:6626074/137‑1

                                                                                                                                          GCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACT        >  1:15741612/1‑137

                                                                                                                                          GCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACT        <  1:16731246/137‑1

                                                                                                                                          GCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACT        >  1:8213909/1‑137

                                                                                                                                          GCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGCGCCATGCGCACGCGCCCGGCAACCGGGTTCACCCCATCCACT        >  1:5890115/1‑137

                                                                                                                                          GCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGAGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACT        <  1:10715347/137‑1

                                                                                                                                            GGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTC      >  1:17129796/1‑137

                                                                                                                                            GGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTC      >  2:2290776/1‑137

                                                                                                                                            GGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTC      >  1:11150407/1‑137

                                                                                                                                            GGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTC      >  2:12751945/1‑137

                                                                                                                                            GGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTC      >  1:2688395/1‑137

                                                                                                                                            GGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTC      >  1:13505021/1‑137

                                                                                                                                            GGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTC      >  2:4932718/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  1:10296648/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  2:10026844/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  1:4636046/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  1:357624/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  2:5887058/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  1:1436065/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  1:2454371/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  2:3609689/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAC    >  2:2808443/1‑137

                                                                                                                                              GCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGAACCCGGGTTCACCCCATCCACTTCAC    >  1:3835518/1‑137

                                                                                                                                               CGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACG   >  2:5689410/1‑137

                                                                                                                                               CGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACG   >  2:7988210/1‑137

                                                                                                                                               CGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACG   <  2:9407462/137‑1

                                                                                                                                               CGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACG   >  2:16337479/1‑137

                                                                                                                                                GTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGC  <  2:7370635/137‑1

                                                                                                                                                GTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGC  <  2:2617142/137‑1

                                                                                                                                                GTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGC  >  1:7646023/1‑137

                                                                                                                                                GTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGC  >  2:13381608/1‑137

GCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCA‑‑‑AGTAGACCCTATCAAGGCCCTTCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451_phaM1/1779925‑1780066

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGC  >  AE015451_phaM1/1780129‑1780264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.