| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 5,393,059 | Δ5,661 bp | [hsdR CDS (Type I restriction enzyme EcoAI R protein)]–[hsdS CDS (Type I restriction‑modification system_ S subunit)] | [hsdR CDS (Type I restriction enzyme EcoAI R protein)], hsdM CDS (Type I restriction enzyme EcoEI M protein), [hsdS CDS (Type I restriction‑modification system_ S subunit)] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 5393059 | 5398719 | 5661 | 981 [0] | [0] 999 | [hsdR CDS (Type I restriction enzyme EcoAI R protein)]–[hsdS CDS (Type I restriction‑modification system_ S subunit)] | [hsdR CDS (Type I restriction enzyme EcoAI R protein)],hsdM CDS (Type I restriction enzyme EcoEI M protein),[hsdS CDS (Type I restriction‑modification system_ S subunit)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 5393058 | 0 (0.000) | 982 (1.180) | 134/270 | 0.1 | 100% | intergenic (‑386/‑1) | PP_5710 CDS (exported protein of unknown function)/hsdR CDS (Type I restriction enzyme EcoAI R protein) | –/– |
| ? | AE015451_phaM1 | 5398720 = | 0 (0.000) | intergenic (+1/‑10) | hsdS CDS (Type I restriction‑modification system_ S subunit)/PP_5711 CDS (protein of unknown function) | –/– | |||||