Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM11,210,8300GT27.9% 1280.1 / 233.7 595intergenic (+20/+17)ytnA CDS (Uncharacterized amino acid permease YtnA)/PP_1060 CDS (putative Glutamate synthase_ large subunit)–/–
Reads supporting (aligned to +/- strand):  ref base G (94/335);  new base T (165/1);  total (259/336)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 598 total aligned reads displayed.

GATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATG  >  AE015451_phaM1/1210694‑1210966
                                                                                                                                        |                                                                                                                                        
gATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGGGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTg                                                                                                                                          <  2:3959756/137‑1 (MQ=255)
   aCGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCgg                                                                                                                                       <  2:13032766/137‑1 (MQ=255)
   aCGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCgg                                                                                                                                       <  1:16762710/137‑1 (MQ=255)
       gtgtGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACAATTTTCGGcccc                                                                                                                                   >  1:13151238/1‑137 (MQ=255)
        tgtgGCCCTGTACATCGGCCCGGTGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCACTTTGCGGCCCCa                                                                                                                                  <  1:14002888/137‑1 (MQ=255)
        tgtgGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCa                                                                                                                                  <  1:15999429/137‑1 (MQ=255)
             cccTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGCTTTTCTGCCCCaaagtt                                                                                                                             >  1:10101054/1‑132 (MQ=255)
             cccTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGCTTTGTGGGCCCCGCGtt                                                                                                                             >  1:15443170/1‑137 (MQ=255)
                   aCATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCa                                                                                                                       <  2:13765880/137‑1 (MQ=255)
                    cATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTGCGGACCCAGCGTtctctccg                                                                                                                      >  2:16247401/1‑135 (MQ=255)
                     aTCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAgg                                                                                                                     <  2:5834889/137‑1 (MQ=255)
                        ggCCCTACGTTCCGGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTTGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGgccg                                                                                                                  <  2:1098196/137‑1 (MQ=255)
                        ggCCCGGCGTTCCTGGTGTTGCTGACAGTGTTGTATTACACGTTCCGCCTTGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGgccg                                                                                                                  <  2:17104111/137‑1 (MQ=255)
                        ggCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGgccg                                                                                                                  <  2:16855778/137‑1 (MQ=255)
                          cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTGGCCCCAACGTTCTCTCCGgccacc                                                                                                                >  1:11385111/1‑137 (MQ=255)
                          cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTGTGGACCCAACGTTTTTTCCGgccgcc                                                                                                                >  2:13995038/1‑137 (MQ=255)
                          cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGgccgcc                                                                                                                <  1:18206399/137‑1 (MQ=255)
                          cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCCTTTTGGCCCCCACGTTCTCTCCAgccgcc                                                                                                                >  2:9424394/1‑137 (MQ=255)
                          cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCACTTTGCGGCCCCAGCGTTCTCTCAGgcctcc                                                                                                                >  2:6514300/1‑137 (MQ=255)
                          cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTGTGGCCCCAACATTCTCTCAGgacgcc                                                                                                                >  1:16190848/1‑137 (MQ=255)
                          cccGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGCTTTGCGGCCCCAACCTTCTCCCCAgccgcc                                                                                                                >  2:6706448/1‑137 (MQ=255)
                            cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTGTGGCCCCAACGTTCTCTCCGGCCGCCAc                                                                                                              >  2:16527952/1‑137 (MQ=255)
                            cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGCCTTTCGGCCCCAGCGTTCTCTCCAGCCGCCAc                                                                                                              >  2:15814423/1‑137 (MQ=255)
                            cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGAAGCTTTTTGGTCCCAGCGTTTTCTCCGgccccccc                                                                                                              >  1:12054089/1‑135 (MQ=255)
                             ggCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGCTTTTTTGCCCCCACGTTCTCTCCTGCCGCCAcc                                                                                                             >  1:5870736/1‑136 (MQ=255)
                               cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGTCGCTTTTCTGACCCCGCGTTCTCTCAGgccgccccctt                                                                                                           >  2:4677089/1‑132 (MQ=255)
                               cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTCTGTCCCCGCGTTTTCTCCGGCCCCCAcctt                                                                                                           >  2:9657037/1‑134 (MQ=255)
                               cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTGCGGCCCCAACATTCTCTCCGGCCGCCACCTc                                                                                                           >  1:1489999/1‑137 (MQ=255)
                               cGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGATTTGTGGACCCCACGTTCTCTCCGGTCGCCACTTc                                                                                                           >  1:4504928/1‑137 (MQ=255)
                                  tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTGGCCCCAGCATTATCTCCAGCCGCCAACTCGCt                                                                                                        >  2:8075272/1‑137 (MQ=255)
                                  tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                        <  2:7192239/137‑1 (MQ=255)
                                  tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                        <  2:14770330/137‑1 (MQ=255)
                                  tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                        <  2:12561048/137‑1 (MQ=255)
                                  tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                        <  2:11974564/137‑1 (MQ=255)
                                  tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                        <  1:10559130/137‑1 (MQ=255)
                                  tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCt                                                                                                        <  1:5058306/137‑1 (MQ=255)
                                               gACAGTGCTGTATTACACGCTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGTCGCTTTGTTGTCCCCGCGTTCTTTCAGAACGCCCCCTTTCTGTGCGGCTCTaaa                                                                                           >  2:15302105/1‑137 (MQ=255)
                                                aCAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTGGCCCCCACATTCTCTCAAGCCGCCACCTCACCGTGTGGCTCTaaaa                                                                                          >  2:2647396/1‑136 (MQ=255)
                                                     gCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTCGGCCCCCACGTTCTCTCCAGCCTCCCCTTCTCTTTTTTGCTCTAAACTTTcc                                                                                     >  1:16327422/1‑137 (MQ=255)
                                                          aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                <  2:15067356/137‑1 (MQ=255)
                                                          aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                <  1:12689906/137‑1 (MQ=255)
                                                          aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                <  1:787131/137‑1 (MQ=255)
                                                          aTTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCg                                                                                <  1:6850608/137‑1 (MQ=255)
                                                                 gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGTCGCTTTTTGGGCCCCATTTTCTCTTCGGCCTCCCCTTTTCTTTTTGGCTCGAAAACGTCTTCCCGGGTCAGt                                                                         >  2:4931138/1‑137 (MQ=255)
                                                                 gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGGCTTTCGGTCCCCACATTCTCCCCAGACGCCACCCCTCCGTTCAGCTCGAAAATGTCCACCCaggtccgg                                                                         >  1:3143422/1‑132 (MQ=255)
                                                                 gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTTGTCCCAACGTTCTCTCCGGCCACCCCCTCTCCTTGCGGATCGAAACTGTCCGCCCGGGACaat                                                                         >  1:17862442/1‑135 (MQ=255)
                                                                 gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACGGTTTGTGGTCCCCACATTCTCCCCAGCCGCCCCCTCCCCGTTTGGATTTAAACCTTCCGCCCAGGCCaat                                                                         >  1:8514211/1‑135 (MQ=255)
                                                                   tCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTg                                                                       <  1:15526835/137‑1 (MQ=255)
                                                                     cGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGcc                                                                     <  2:18170972/137‑1 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGTCGCTTTTCGGCCCCCACTTTCTCTCCGGCCGCCCCTTCTCTTTTTTGTTCTAAAATGTCCGCCCCGGCCAGTTgtcc                                                                    >  2:8488472/1‑134 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGGGCCTTTTGGTCCCCACGTTTTCTCCGGCCCCCCCTTCGCTTTGTGGGTCGGAAATGTCCACCCGGGACAGGTGTca                                                                    >  1:12270160/1‑137 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTTGTCCCCACGTTCTCTCCAGCCGCCCCCTCCCTGTTCTGTTCTAAACTGTTCTCCCTGGTCAATTGCca                                                                    >  2:6222787/1‑137 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGTTTTTTGGGCCCCGCGTTTTCTCCGGCCTCCACCTTTCTGTTTGGGTTTAAAATGTCTGCCCGGGTCAGttttca                                                                    >  1:8142939/1‑133 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGCTTTGCGGCCCCCATGTTCTCTCAGGCCGACACTTCGTTGTGTGGCTCGAAACTGTCCGCCCGGGCCAGTTGCca                                                                    >  2:17845440/1‑137 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGAGCCTTTTGGCCCCCACATTCTCTCCAGCCACCACCTCCCTGTTTGGATCTAAAACGTCCTCCCCGGACAGTTTccc                                                                    >  1:13770989/1‑136 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTTCGGCCCCAGCGTTCTCCCCAGCCGCCACCTCGCTGTGCGGTTCGAAACTGTCCGCCCGGGCCAGTTGCca                                                                    >  2:10392013/1‑137 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCAACCTTTCGGCCCCAGTTTTCTCTCCGGACTCCCCCTCGCGCTGCGGCTCGCCAATGTCCGCCCATGCCAGGTGccc                                                                    >  2:11621847/1‑136 (MQ=255)
                                                                      gCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGACAATTTTTGGTCCCCACACTCCCTCCGGCCACCCCCTCTCTGTTTGGCTCGAAACCGTCCGCCCCGGCCAGttttcc                                                                    >  2:5177513/1‑133 (MQ=255)
                                                                        cTGGTGCCGAAAGACGCACAAGGTGTGACGCGTACAGCCTCCTGACCTGACGTGGGGACACTTTTGCGACACAACATTCTCTCCAGCCACCCCCTCTCCGTGCGGCCCCCAACCGTCCGCCCCGAATAGTTGCcaca                                                                  >  2:15934278/1‑137 (MQ=255)
                                                                        cTGGCGCCGAAGGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCCCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                  <  2:7717016/137‑1 (MQ=255)
                                                                        cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCtaca                                                                  <  2:13224557/137‑1 (MQ=255)
                                                                        cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCcaca                                                                  <  2:7433428/137‑1 (MQ=255)
                                                                             gcCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCcgc                                                             <  2:12699132/137‑1 (MQ=255)
                                                                             gcCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCcgc                                                             <  1:1460114/137‑1 (MQ=255)
                                                                                                gtgACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCa                                          <  2:10655559/137‑1 (MQ=255)
                                                                                                  gACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCAcc                                        <  1:9143135/137‑1 (MQ=255)
                                                                                                      aGTACAGCCTCCTGACCTGACGTGGGGGCGCTTTTTGGTCCCAACGTTCTCTCCGGCCGCCCCCTCTCTGTTTGGCTCGAAACCGTTCGCCCTGGCCAGTTTTCCCACCCGCGAATAGAACTGGCCGTTTCCCTctc                                    >  2:17364650/1‑135 (MQ=255)
                                                                                                      aGTACAGCCTCCTGACCTGACGTGGGGACGCCTTTCGGCCCCAACGTTCTCTCCGGCCGCCCCCTCGCTGTTTGGCCCTAAACTGTCCCCCCCGGACAGTTTCCCCATCCCCGAAGCGAAACGGCCATTCACCTCGc                                    >  2:12161856/1‑137 (MQ=255)
                                                                                                        tACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCg                                  <  1:2574556/137‑1 (MQ=255)
                                                                                                          cAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGt                                <  2:14591895/137‑1 (MQ=255)
                                                                                                          cAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGt                                <  1:13506267/137‑1 (MQ=255)
                                                                                                          cAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGt                                <  2:11165030/137‑1 (MQ=255)
                                                                                                           aGCCTCCTGACCTGACGTGGGGGCGCTTTTTGGTCCCAACGTTTTCTCCGGCCGCCCCCTCGTTTTTTTGCTTGCAAACGTTCTCCCGGGACAGTTGCCACCCCCGCGAATAAAAATGGTCGTTTACCCCTCCAGTc                               >  2:16072377/1‑137 (MQ=255)
                                                                                                           aGCCTCCTGACCTGACGTGGGGCCGCTTTTTGGCCCCCACCTTCTCTCCAGCCCCCACCTCTCCTTGCGGCTCAAAAACGTCCCCCCAGGCCAACTTCCACACCCCCAAAAAGAAACGGCCGTTCCCCCCACCAGTc                               >  2:7028255/1‑137 (MQ=255)
                                                                                                           aGCCTCCTGACCTGACGTGGGGAGGATTTGTGGGCCCAGTGTTCTCTCCGGCAGCCCACTCTTCGTGTGGCTCCGAACCGTCCACCCGGGATAATTGTCAACCCCGCCAACAAGAATGGCCGTTTCACTCGCCGGTc                               >  2:5346685/1‑137 (MQ=255)
                                                                                                             cctcctGACCTGACGTTGGGCCGCTTTGCGGCCCCAGTGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTcag                             <  1:11756426/137‑1 (MQ=255)
                                                                                                             cctcctGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTcag                             <  1:3635315/137‑1 (MQ=255)
                                                                                                              ctcctGACCTGACGTTGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTcagc                            <  1:17022125/137‑1 (MQ=255)
                                                                                                              ctcctGACCTGACGTGGGGACGCTTTTCGGCCCCAACATTCTCTCCAGCCACCCCCTCTCTTTTTGGTTTGAAACCGTCCGCCCAGGGCAATTGCCACACCCGCGAACCGAACCGGCCATTCCCCCCGCCAGTcagc                            >  2:8965752/1‑137 (MQ=255)
                                                                                                                cctgacctgaCGTGGGGCCGCTTTTTTGCCCCAACGTTCTCTCCAGCCGCCACCTCTCTGTTTGGTTTGAAAATGTCCGTCCAGGACAGTTGCCCCATCCGCGAAGAGAACTGGTCGTTCTCCTCTCCTGTccgtag                          >  2:14351314/1‑132 (MQ=255)
                                                                                                                  tgacctgacTTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCGCGCCGGTCAGCAGCt                        <  1:9793260/137‑1 (MQ=255)
                                                                                                                  tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCt                        <  2:3610215/137‑1 (MQ=255)
                                                                                                                  tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCt                        <  2:1343343/137‑1 (MQ=255)
                                                                                                                  tgacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTAGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCt                        <  2:18354192/137‑1 (MQ=255)
                                                                                                                   gacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTc                       <  1:6222787/137‑1 (MQ=255)
                                                                                                                   gacctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTc                       <  1:15162856/137‑1 (MQ=255)
                                                                                                                    acctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCa                      <  1:17683749/137‑1 (MQ=255)
                                                                                                                    acctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCa                      <  1:3549356/137‑1 (MQ=255)
                                                                                                                     cctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCAc                     <  2:1856074/137‑1 (MQ=255)
                                                                                                                     cctgacGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCAc                     <  1:1856805/137‑1 (MQ=255)
                                                                                                                          cGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCATGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGc                <  1:8899349/137‑1 (MQ=255)
                                                                                                                            tGGGGACACTTTTCGGCCCCCACGTTTTCTCCGGCCGCCACTTCGCTTTGCGGCTCGAAACTGTCCACCCGGGCCAATTTCCCCACCCTCGAATAAAACCGGCCATTCCCCCCGCCAATCAACAGCCCACCCTGCtt              >  2:8766135/1‑137 (MQ=255)
                                                                                                                             tgggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTc             <  2:4547282/136‑1 (MQ=255)
                                                                                                                             ggggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTc             <  2:3149086/137‑1 (MQ=255)
                                                                                                                                   gCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAac       <  2:10776794/137‑1 (MQ=255)
                                                                                                                                     tttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAacac     <  2:1770001/137‑1 (MQ=255)
                                                                                                                                     tttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAacac     <  2:4459996/137‑1 (MQ=255)
                                                                                                                                      ttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAAcaca    >  2:10014730/1‑137 (MQ=255)
                                                                                                                                       tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt   <  2:2400352/137‑1 (MQ=255)
                                                                                                                                       tGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt   <  2:3315762/137‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
GATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGTCCGCCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATG  >  AE015451_phaM1/1210694‑1210966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑