Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM14,675,3600TG42.9% 189.5 / 59.7 190intergenic (+59/+45)PP_4137 CDS (putative Outer membrane siderophore receptor)/chrR CDS (Chromate reductase)–/–
Reads supporting (aligned to +/- strand):  ref base T (71/34);  new base G (2/77);  total (73/117)
Fisher's exact test for biased strand distribution p-value = 4.98e-22
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 190 total aligned reads displayed.

CGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCG  >  AE015451_phaM1/4675226‑4675493
                                                                                                                                      |                                                                                                                                     
tctccAGGACACTACCCTTTCGCCACCGGGCGAATGATTTGGCGCGTCTGCCTGTGTTTCCTACATCTCCCTCTGCCGGGGGGGCGCGGGTTTACCCGCGAATGCTTCATTGAATTTGCCGACTCCTTCGCGGTTaa                                                                                                                                     <  2:13332818/134‑1 (MQ=255)
cgcccAGGACAATGCCCGTTCGACACCGGGAGAAGGATTTGGTGTGTGTGCCGGTTTTTCCTACATCCTCCGCTGACGGGGGGGCGCGGGTTGACCCGCGAATTCGTCATTGAATTTGCCGACGCATTCGCGGGCaa                                                                                                                                     <  2:14890376/134‑1 (MQ=37)
cGGCCAGGACAATTCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCAGCTGACGGTTGGGCGTGGGTTTACCCGAGAATTCGTCATTGAATTTGCCGACGCATTCGTGGGTaa                                                                                                                                     <  2:14319103/137‑1 (MQ=255)
cGGCCAGGACAATGCCTGTTCGACACCGGGCGAAGGATTTGGTGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCAAATGCTTCATTGAATTTGCCGACGCATTCGCGGGGaa                                                                                                                                     <  2:4070549/137‑1 (MQ=39)
cGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTAGGCCGGGGTTTCCTACATCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAATTTGCCGACGCGTTCGCGGGGaa                                                                                                                                     <  2:10763975/137‑1 (MQ=39)
 ggCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTTCCCACGAACGCGTCCTTGGATTTTCCCCCGCACTCTCCGGTaaa                                                                                                                                    >  2:11599212/1‑137 (MQ=255)
   ccAGGACAATGCCCGTTCGACACCGGGTGAAGGGTTTGGTGTGTATGCCGGGGTTTCCTACAGCTTCCGCGGACGGGTGGGCGTGGGTTTACCCGCGAATGCGTCATTGAGTTTGCCGACGCATTCGTGGGGAAAcc                                                                                                                                  <  2:9510330/137‑1 (MQ=255)
   ccAGGACAATCCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAAcc                                                                                                                                  <  2:12887950/137‑1 (MQ=255)
   caaGGACAATTCCTGTTAAACACTGGGCGAAGGGTTTGGCGTGTATGCTGGGGTTTCCTACAGCTTCTGCTGATGGGTGGGCGTGGGTTTACCCGCGAATGCGTCATGGAATTTTCCGACGCGTTCGCGGGCAAAcc                                                                                                                                  <  1:8869572/135‑1 (MQ=255)
     gggACACTTCCTGTTCGACACCGGGCGAAGGGTTGGGCGTGTAGGCCGGGGTTCCCTACAGCTTCCGCGGACGGGGGGGCGTGGGTTTACCTGCGAATGCTTCATGGAGTTTGCCGACACATTCGCGGGTAAACCCg                                                                                                                                <  2:12164214/136‑1 (MQ=255)
     ggaaCAATGCCCGTTCGACACCGGGCGAAGGGTTTGGCGTGGGTGCTGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTGACCTGCGAATGTGTCGTTGAGTTTGCCGACGCGTTCGCGGGGAAACCCg                                                                                                                                <  2:12311468/134‑1 (MQ=255)
     aGGACAATGCCTGTTCAACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCGGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAATTTGCCGACGCATTCGTGGGGAAACCCg                                                                                                                                <  2:16986957/137‑1 (MQ=38)
     aGGAAAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATTCGTCATTGAATTTGCCGACGCGTCCGCGGGTAAACCCg                                                                                                                                <  2:6527017/137‑1 (MQ=255)
        aCAATCCCCGTTAGACACCGGGCGAAGGGTTTGTTGTTGATGCTGGGGTTTCCTACATCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGTGAGTGTGTCGTTGAGTTTGCCGACGCATTCGTGGGGAAACCCGCTc                                                                                                                             <  1:7153185/137‑1 (MQ=255)
             gCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACATCTTCCGCGGATGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTaca                                                                                                                        <  1:13426727/137‑1 (MQ=38)
             gCCCGTTAGACACCGGGCGAAGGATTTGGCGTGTATGCTGGGGTTTCCTACAGCTTCCGCGGATGGGGGGGCGCGGGTTTACCCGTGAATGCGTCGTTGAATTTGCCGACGCGTTCGCGGGGAAACCCGCTCCTaca                                                                                                                        <  2:2102375/137‑1 (MQ=255)
               ccGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTTCCCCCAACGCGTCCCTTAACCTTCCGACACACTCCCTGGTAAAACCCCTCCCCcaca                                                                                                                      >  2:13482640/1‑137 (MQ=255)
                ctttCGACACCGGGCGAAGGGTGTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCGGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAATTTGCCAACGCATTCGCGGGTAAACCCGCTCCTACACAg                                                                                                                     <  1:17731682/135‑1 (MQ=37)
                cGTTCGACACCGGGCGAAGGGTTTGGTGTGGATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAg                                                                                                                     <  1:10153056/137‑1 (MQ=255)
                cGTTCGACACCGGGCGAAGGATTTGGAGTGTATGCTGGGGTTTTCTACAGCTTCCTCTGATGGGTGGGCGCGGGTTGACCCGTAAATGCGTCGTTGAATTTGCTGATGCATTTGCGGGGAAACCCGCTCCTACACAg                                                                                                                     <  2:8576370/137‑1 (MQ=255)
                         ccGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATGGAATTTGCCGACGCGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGc                                                                                                            <  2:17919491/137‑1 (MQ=255)
                          cGGGCGAAGGGTTTGGAGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGATGGGGGGGTGCGGGTTTACCCGCGAATGCGTCGTGGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGca                                                                                                           <  1:1454907/137‑1 (MQ=37)
                           gggTGAAGGATTTGTCGGGTAGCCCGGGTTTTCCTACAGCTTCCGTTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:18396341/137‑1 (MQ=37)
                           gggCGAGGGGTTTGGTGTGTATGCTGGGGTTTCCTACATCTTCCGCTGACGGGTGGGCGTGGGTTGACCCGCGAGTGCGTCGTTGAATTTTCCGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:16071566/137‑1 (MQ=255)
                           gggCGAAGGGTTTGGCGTGTATTCCGGGGTTTCCTACACCCTCCCCTGACGGGTGGGCGCGGGTTTACCCGCGGGTGCGTCATTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:6922112/137‑1 (MQ=37)
                           gggCGAAGGGTTGGGGGTGGGGGCGGGGGTTTCCGACATTTCCTGCTGACGGGGGGGCGTGGGTTGACCCGGGAAGGTGGAGTGGAGTTTGACGACGAGTTAGTGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:2346936/137‑1 (MQ=255)
                           gggCGAAGGATTTGGCGTGTATGCGGGGTTTTCCTACATCTTCCGCGGATGGGGGGGCGCGGGTTTACCCGCGAATGCTTCATGGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:12469070/137‑1 (MQ=37)
                           gggCGAAGGATTTGGCGTGTATACCGGGGTTTCCTCCAGCTTCCGCGGACGGTTGGGCGCGGGTTCACCCGCGAATGCGTCATGGAATTTGCTGACACGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  2:10202391/137‑1 (MQ=255)
                           gggAGAAGGGTTTGGTGTGGAGTCTGGGTTTTCCTACGCCTTCCGCGGACGGGGGGGCGTGGGTTTACCCGCGAGTGTGTCGTGGAGTTTGCCGACGTGTTCTCGGGGAACCCCGCTCCTACACAGGGGCGTTGcac                                                                                                          <  1:17235528/137‑1 (MQ=255)
                                aaGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGGGGGCGCGGGTTTACCCGTGAATGCGTCATTGAATTTGCCGACACATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCAcagcag                                                                                                     <  2:16300248/137‑1 (MQ=255)
                                 aGGATTGGTCGTGTATTCC‑GGGTTTCCTAAAGCTTCCACTGACGGTTGGTCGCGGGTTTACCCGCAAGTGCGTCATTGAATTTTCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  2:13787636/137‑1 (MQ=255)
                                  gggtttGGTGTGTAGGCTGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGTGGGTTTACCCGCGAGTGCGTTGTTGACTTTTCCAACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  1:15006316/134‑1 (MQ=255)
                                  gggtttGGCGTGTATGCTGGGGTTTCCTACATCTTCCGCTGATGGGTGGGTGCGGGTTTACCCGCGAGTGCGTCGTGGAGTTTGCCGACGCATTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGa                                                                                                   <  1:18086367/134‑1 (MQ=255)
                                   gATTTGGCGTGTATACTGGGTTTTCCTACAGCTTCCGCTGAGGGGTGGGCGAGGGTTTACCTGCAAATGCGCCATTGAGTTTGCCGACGCATTCGAGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGAt                                                                                                  <  2:7583488/137‑1 (MQ=255)
                                            ttgaTGCCGGGGTTTCCTACAGCTCCCGCGGATGGGGGGGCGTGGGTTTACCCGCGAAGGTGTCGTTGAGTTTCCCGACACATTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTc                                                                                         <  1:2658152/134‑1 (MQ=255)
                                            tggaTGTCGGGGTTTCCGACAGCCCCCGCTGCCGTTTGGGCGTGGTTTCACCCGCGAATTCTTCGTGGACTTTGCCGACGTATTCTTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTATTGGTTc                                                                                         <  2:8439037/134‑1 (MQ=255)
                                               gtGCGGGGGTTTCCTACGTTTTCTGTGGAGGGGGGGGGGTGGGTTTACCCGAAAATGTGTCGTGGAGTTTGCTGAGGCGTTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGa                                                                                      <  1:8206472/136‑1 (MQ=255)
                                               ctGCCGGGGTTCCTTACATCTTCCCTTGACGGGTTGGCACGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGa                                                                                      <  2:6889771/136‑1 (MQ=37)
                                                tGCTGGGGTTCCCTACATCTTCCGCTGACGGGTGGGCGCGGGTTTACCAGCGAATGCGTCGTTGAGTTGGCCGACGCATTTGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAc                                                                                     <  1:15423361/137‑1 (MQ=255)
                                                 gctggggTTTCCTACATCTTCCGTGGAGGGGGGGGTGTGGGTTTACCTGCGAGTGTGTCGGGGGGTTTGCCGACGCGTTCGGGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  1:6597131/134‑1 (MQ=255)
                                                 gCCGGGGTTTCCTACGGTTTCCGTGGATGGGTGGGTGTGGGTTGACCTGCGAGTGCGTAGTTGAGTTTGCCGACGCGTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                    <  1:17367390/137‑1 (MQ=255)
                                                      ggTTTCCTACACCTTCCTCTGACGGGTGGGCGCGGTTTTCCCCGCGAGTTTTTCATTGAATTTGCCGAGGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCt                                                                               <  2:11278516/137‑1 (MQ=255)
                                                              ccAGCTTCCGCTGACGGGTGGGTGCGGGTTTACCCGCGAATGCGTCATTGACTTTGCTGACGCATTCGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACt                                                                       <  2:18261094/136‑1 (MQ=38)
                                                                  cTTCCGCTGACGGGGGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAc                                                                   <  2:6383301/137‑1 (MQ=255)
                                                                       gCTGACGGGTGGGCGCGGGTTTTCCCCCAAACCCGTCACTTAAATTTTCGACGCAATCTCGGTGAAACCCGCTCCCCCACCAAGGGGTTGCACAACAAGATTCGGGGGGCAAACCACCCCGTTTCACCTCCCCCacg                                                              >  2:17627574/1‑135 (MQ=255)
                                                                         tGATGGGTGGGCGGGGGTTTACCCGAGAATGCGTCGTTGAGTTTGCCGATGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                                            <  2:15298906/137‑1 (MQ=255)
                                                                         tGATGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGTTGAGTTGGCCGACGCATTCGTGGGCAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                                            <  1:5288489/137‑1 (MQ=38)
                                                                         ggACGGGTGGGCGCGGGTTCACCAGCGAGTGTGTCGTGGAATTTGCCGACGCGTTTGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                                            <  2:1638246/136‑1 (MQ=255)
                                                                            cGGGTGGGCGTGGGTTGACCCGCGAGTTCTTCGTGGAATTTCCCAACGTGTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCa                                                         <  1:6681417/137‑1 (MQ=255)
                                                                                     gcgGGTTTACCCGCGAATGCGTCATTGAGTTTGCCGACGCATTTGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCg                                                <  1:6183778/137‑1 (MQ=255)
                                                                                             aCCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGc                                        >  2:1261762/1‑137 (MQ=255)
                                                                                               ccGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCt                                      >  1:4259619/1‑137 (MQ=255)
                                                                                                cgcgAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAAACCGCCCCTACACAGGGGCGTTGCACAACAGGACTAGGGGTTCAGACCACCCTGTTCCACTTCACCCATGACGCAAACATGTCGACAAAcagccg                                     >  2:18332099/1‑132 (MQ=38)
                                                                                                     aTGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGa                                >  1:13108833/1‑137 (MQ=255)
                                                                                                      tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACGGGGGCGTTGCACAGCAGGATTAGGGGCTCAGACCGCACTGTTCAAATTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  2:4539064/1‑137 (MQ=255)
                                                                                                      tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  1:13652593/1‑137 (MQ=255)
                                                                                                      tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  2:17769969/1‑137 (MQ=255)
                                                                                                      tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  1:7782987/1‑137 (MQ=255)
                                                                                                      tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  1:9528687/1‑137 (MQ=255)
                                                                                                      tGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGANTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                               >  1:16069110/1‑137 (MQ=255)
                                                                                                           cgttGAATTGGCCGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc                          <  2:3663412/135‑1 (MQ=255)
                                                                                                           cATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc                          >  1:17388560/1‑137 (MQ=255)
                                                                                                           cATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc                          >  1:16786208/1‑137 (MQ=255)
                                                                                                            aTTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg                         >  2:8986204/1‑137 (MQ=255)
                                                                                                             ttGAGTTTTCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                        <  2:10100602/137‑1 (MQ=255)
                                                                                                             ttGAATTTGCCGACGCGTTTGTGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                        <  2:14694859/137‑1 (MQ=255)
                                                                                                             tggAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                        <  1:8954179/135‑1 (MQ=255)
                                                                                                              tGAGTTTTCCGACGCGTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg                       <  1:18450408/137‑1 (MQ=255)
                                                                                                              tGAATTTTCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg                       <  2:17368699/137‑1 (MQ=255)
                                                                                                               gagtttGCCGAAGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACACAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGt                      <  1:13169368/134‑1 (MQ=255)
                                                                                                               gAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg                       >  2:7474003/1‑136 (MQ=255)
                                                                                                               gAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg                       >  2:16760744/1‑136 (MQ=255)
                                                                                                               gAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg                       <  1:7474003/136‑1 (MQ=255)
                                                                                                                aaTTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCCGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTc                     >  2:14842774/1‑137 (MQ=255)
                                                                                                                aaTTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTc                     >  2:2963205/1‑137 (MQ=255)
                                                                                                                 aTTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCt                    >  1:10039721/1‑137 (MQ=255)
                                                                                                                   tttctgACGCGTTCGCGGGGAAACCCGCTCCTGCACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg                  <  2:6327903/132‑1 (MQ=255)
                                                                                                                   ttGCCGACGCGTTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg                  <  2:9787728/137‑1 (MQ=255)
                                                                                                                   ttGCCGACGCGTTCGCGGGCAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg                  <  2:17377317/137‑1 (MQ=255)
                                                                                                                   ttGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg                  >  1:11905047/1‑137 (MQ=255)
                                                                                                                   ttGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg                  >  1:968984/1‑137 (MQ=255)
                                                                                                                   ttGCCGACGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg                  <  2:7735949/137‑1 (MQ=255)
                                                                                                                        gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  1:8721924/1‑137 (MQ=255)
                                                                                                                        gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  1:15774317/1‑137 (MQ=255)
                                                                                                                        gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  2:5520842/1‑137 (MQ=255)
                                                                                                                        gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  1:12446277/1‑137 (MQ=255)
                                                                                                                        gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  1:5795827/1‑137 (MQ=255)
                                                                                                                        gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  2:7036151/1‑137 (MQ=255)
                                                                                                                        gACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt             >  2:11377728/1‑137 (MQ=255)
                                                                                                                         aCGCATTCGCGGGGAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTg            <  2:9331438/137‑1 (MQ=255)
                                                                                                                          cGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAACCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa           >  2:6863168/1‑137 (MQ=255)
                                                                                                                             aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:13498422/1‑137 (MQ=255)
                                                                                                                             aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:13922439/1‑137 (MQ=255)
                                                                                                                             aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  2:14128688/1‑137 (MQ=255)
                                                                                                                             aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:12664673/1‑137 (MQ=255)
                                                                                                                             aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:5456127/1‑137 (MQ=255)
                                                                                                                             aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCt        >  1:11155091/1‑137 (MQ=255)
                                                                                                                              ttCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCtt       >  1:3253332/1‑137 (MQ=255)
                                                                                                                                   gggTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCg  >  1:16696282/1‑137 (MQ=255)
                                                                                                                                   gggTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCg  >  1:11035003/1‑137 (MQ=255)
                                                                                                                                      |                                                                                                                                     
CGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCG  >  AE015451_phaM1/4675226‑4675493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑