| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 353,067 | A→G | intergenic (+34/+84) | hisF CDS (Imidazole glycerol phosphate synthase subunit HisF) → / ← cbcV CDS (choline _ betaine _ carnitine ABC transporter ‑ ATP binding subunit) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 353,067 | 0 | A | G | 99.7% | 1459.8 / NA | 392 | intergenic (+34/+84) | hisF CDS (Imidazole glycerol phosphate synthase subunit HisF)/cbcV CDS (choline _ betaine _ carnitine ABC transporter ‑ ATP binding subunit) | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (182/209); total (183/209) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 394 total aligned reads displayed.
TGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGA > AE015451_phaM1/352934‑353200 | tGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGc < 2:7096875/137‑1 (MQ=255) gCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGCTCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCa > 2:18412011/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGTCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg > 1:3465488/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCNTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg > 1:17174340/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg > 1:10286342/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg > 2:10465853/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg > 1:6452475/1‑137 (MQ=255) cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACg < 2:16089033/137‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 1:13387117/137‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 1:5150854/137‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTACCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc < 2:74193/137‑1 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGGACGCCCGcc > 1:6078938/1‑136 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCt > 1:15025577/1‑137 (MQ=255) ggTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACt > 1:3805455/1‑137 (MQ=255) gTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑c < 1:7183236/137‑1 (MQ=255) gTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑c < 1:3102856/137‑1 (MQ=255) gTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑c < 1:258178/137‑1 (MQ=255) gTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑c < 2:8782976/137‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGATTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCcaca < 2:8056372/137‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCcaca < 1:16133569/137‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCcaca < 2:15015697/137‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCcaca > 2:1296185/1‑137 (MQ=255) gcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAg > 2:12622134/1‑137 (MQ=255) gcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGtt < 1:9272202/137‑1 (MQ=255) ccAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGttt < 2:16422437/137‑1 (MQ=255) ccAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGttt < 1:3186746/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 2:8657514/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 1:12385842/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 1:14318902/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 1:7520421/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 2:6586000/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 2:14349550/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 2:10192370/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 2:11709440/137‑1 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCt < 2:15785675/137‑1 (MQ=255) cATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGGTg > 1:7845269/1‑137 (MQ=255) cATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGAACGGGGCTGCTTTGCAGCCCTTCGCGGGCCCGCCCGCT‑CCCACAGGTTTGCTg > 2:18553988/1‑137 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGTAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGGTCGCTGAGCCATTGACCGGGGCGGCTTTGCAGTCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 2:8919964/137‑1 (MQ=38) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 2:10716739/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:7368171/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:9869686/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:7052924/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 2:7769999/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 2:9322806/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:5040515/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:4074935/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:11049474/137‑1 (MQ=255) aTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:15617241/137‑1 (MQ=255) aTCTTCCACTGTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTTGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 2:2183469/137‑1 (MQ=255) aTCCTCCACTTTTGCGAGTACACAGTGCCGTAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGCCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACGGGTTTGCTga < 2:16720757/137‑1 (MQ=38) cTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTgaga < 1:4421364/137‑1 (MQ=255) ttCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGAt < 1:9518203/137‑1 (MQ=255) tCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga < 1:8593777/133‑1 (MQ=255) cACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGAtctc < 1:1910188/137‑1 (MQ=255) cACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGAtctc < 1:15552985/137‑1 (MQ=255) aCTTTGGCGCGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACACCCGCTCCCCCCGGGTTTGC‑GAGAtctcc > 1:6690239/1‑136 (MQ=38) aCTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACCTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCACTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGTACGCCCACC‑CCCCCAAAGTTGTTGAAAtctcc > 1:5326206/1‑136 (MQ=255) ggCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAAGTTTGCTGAGATCTCTGTggg > 1:8372943/1‑137 (MQ=255) gAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGaac > 2:3129295/1‑135 (MQ=255) acaGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGGCCGCT‑CCCACAAGTTTTTTGAGATCTCCGTGGGAGCGGGCGt > 1:1963045/1‑137 (MQ=38) gCCGGAGGCCAAGGCCTACGTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACT‑CCCAAAGGGTTGCTGAGATCTCTGGGGGAGAGGGCGTGCCcg > 2:1363209/1‑137 (MQ=38) gCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCCCAGGTTTTTTGGGGTCTCTGTGGGAGTGGGCGTGCCcg > 1:17683533/1‑137 (MQ=38) gCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCcg > 2:8413735/1‑137 (MQ=255) gCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCcg > 1:13739763/1‑137 (MQ=255) gCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACC‑CCCAAAGGTTTGCTGAGGGCTCTGTGGGAGCGGGCGTGccca > 1:11601714/1‑136 (MQ=38) ggAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACT‑CCCCCAAGTTTTTTGGGATCTCTTTGGGAGCGGGCGTGCCCGCGa > 1:16414120/1‑137 (MQ=38) gAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTAGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTGTGTGGGAGCGGGCGTGCCCGCGaa > 2:3990783/1‑137 (MQ=255) aGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCC‑CCCACAGGTTTGCTGAGGTTTCCGTGGGAGCGGGCGTTCCCGAGAAg > 1:3609219/1‑137 (MQ=38) aGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGACCGCT‑CCCACAAGTTTGCTGAGGTCTCTGTGGGAGCTGGCGTTcccacaaaa > 1:15681444/1‑131 (MQ=38) ccAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAAGTCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGc > 2:11469485/1‑137 (MQ=255) tccTACATGGCTTCGCGTGGGATTTTTTTTCGTTGACCCATTGCCTGGGCCTTCTTTGCATCCTTTTGTGGGCACCCCCGCC‑CCCACAGTTTTTCTGAGCTCTCTGTGGGAGTGGACGTGCCCGCGAAGGGCCGCGa < 2:14069625/136‑1 (MQ=255) ccTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGACCACT‑CCCAAAAGGTTGGTGGGAGCTCTGTGGGAGCGGGCGTGCCCACAGAGGGACGCGaa > 1:14634247/1‑137 (MQ=25) tGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTTCTTAGATCTCTGTGGGAGCAGGCATGCCCGCAAAAGGCCGCGAAACGGcc > 1:17432587/1‑137 (MQ=37) tGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGACCGCCCACT‑CCCACAAGTTTGCTGAGAGCTCTTTGGGGGCGGGCGTGCCCACAAAGGGCCGCGAAGCGAcc > 1:15971614/1‑137 (MQ=37) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGGACAACCGCC‑CCCCCAGGTTTGCTGGGATCTCCGTGGGAGCGGGCGTGCCCACGAAAGGCCCCCAAACGGaccccact > 1:10001700/1‑133 (MQ=255) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGTCCGCT‑CCCCAAAGTTTTTTGGGGTCTCTTTTGGAGTTGGTGTTCCCGCGAAGGGACGCGAAACGGGCCCaact > 1:12611020/1‑135 (MQ=19) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGTTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCCAtt > 2:11045585/1‑137 (MQ=255) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGGGATCTCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCaagt > 1:11808805/1‑135 (MQ=255) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAAtt > 2:17986023/1‑137 (MQ=255) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCACGAAAGGCCGCGAAGCAGCCCCaact > 2:9493176/1‑135 (MQ=38) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACC‑CCCCCCAGTTTTTCGAGATCTCTTTTGGAGAGGGCTTGCCCCCGAAGGGCCACCAAACGACCCCaacc > 1:1277652/1‑135 (MQ=19) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGACCGCT‑CCCACAAGGTTGGTTAGATCTCTGTGGGGGAGGGAGTGCCCCAAGAGGGCCGCAAAACGGcccccact > 1:3415800/1‑133 (MQ=21) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACACCCACT‑CCCCCAAGTTTGCTGAGGTCTCTTTGGGGGTGGGTGTTCCCGCGAAGGGCCACGGAGCGGCCCCAAtt > 1:9957904/1‑137 (MQ=37) cgcgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGAACGACCACC‑CCCCCAAGTTTTTTGGGATCTCTTTTGGAGCCGGCGTGCCCCCAAAGGACCGCGAAGCAGacccccct > 1:10660223/1‑133 (MQ=255) gcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACACCCGCT‑CCCCCAGGTTTTCTGAGATCTCTGTGGGGGCGGGCGTGCCCACAAAAGGCCCCGAAGCGGACCCaaccgtt > 1:15447885/1‑132 (MQ=37) gggATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGGGGTCTCTGTGGGAGCGGGCGTGCCCGCAAAGGGCCGCGAAACGGCCCCAATttcttc > 2:2884654/1‑137 (MQ=37) ggATCGTTGTTCGCGGCTCCATTGACTGGGTCTGTTTTGCATCCTTTTGCGGGCACTCCCGCC‑CCAACGGTTTTGTTGAGATCTCTGGGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCa < 2:17683533/137‑1 (MQ=21) ggATCGTCGTTCGCTGACCCATTAACTGGGGCTGCTTTGCAGCCTTTCGCGGGCACTCCCGCT‑CCCAAAGGTTTGCTGAGATCTCTGTGGGAGTGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCa < 2:17273882/137‑1 (MQ=38) gCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCAAAGGTTTGCTGAGGTCTCTGTGGGAGCGGGCGTGCCCGCAAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCtt > 2:15442020/1‑137 (MQ=255) tGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGTCCGTCCGCT‑CCCACAGGGTTGTTGGGAGCTCTGTGGGGGTGGGCATGCCCACGAAAGGCCGAAGAGCGGCCCCAATTGTTTCAACCGTGGTTTTTgt > 1:11865797/1‑136 (MQ=19) gATCCATTGACGGGGTTTTTTTTGCGGCCTTTCGTGGGCACTCCCTCC‑CCCACGGTTTTGTGGAGCTTTTTGGGGGGGCGGTCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGcc < 1:13063106/137‑1 (MQ=16) gATCCATTACCTTGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACT‑CCCACAGTTTTGCTGAGGTCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGcc < 2:4180191/137‑1 (MQ=25) ggggCTGCTTTGCAGCCCTTCGCGGGCACGCCCACT‑CCCACAGGTTTTCTGAGATCTCCGTGGGAGCGGGCGTGACCGCAAAAGGCCACAAAACGGAACCAACTGCCTCAACCATGGTTCTTGCCGAGCAACGCGTg > 1:18037772/1‑137 (MQ=21) ctgctTTGCAGCCCTTCGCGGGCACGCCCACT‑CCCACAGGTTTGTTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCCATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTaa > 2:13211464/1‑137 (MQ=255) ctTTGCAGCCCTTCTCGGGCACGCCCGCT‑CCCACAGTTTTGCTGAAATCTCTTTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGc < 2:3363873/137‑1 (MQ=38) cccTTCGCGGGCACGCCCGCT‑CCCACAAGTTTGCTGAGGTCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAACGGCCCCAATTGATTCAACCATGGTTCTTGCCGAGCAGCGCGTGGTAAAACCCGGTATc > 1:485576/1‑137 (MQ=37) cccTTCGCGGGCACGCCCGCT‑CCCAAAGGGTTGCTGAGATCTCTGTGGGAGCGGGCGTGTCCGCAAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTTTTGTCAAGCAGCGCGTGGTAAAGCTCGGTATc > 2:3724391/1‑137 (MQ=38) cccTTCGCGGGCACGCCCACT‑CCCACAAGTTTGTTGAGATCTCTGTGGGAGAGGGCGTGCCCACGAAAGGACGCGAAAAGGACCCAACTGCTTCCACCACGGTTCTTTCCAAGCAGCGCGTGGTAAAGCCCGGTATc > 2:6352924/1‑137 (MQ=255) tCGCGGGCACTCCCTCT‑CCCACAGGTTTGCTGAGCCCCCTGTGGGAGTGGGTGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCg < 2:5375154/137‑1 (MQ=38) cgcgGGCACGCCCGCT‑CCCACCGGTTTGCTGAGAGCTCTGGGGGAGCAGGCATGCCCGCGAAGGGCCCAGAAGCGGACCCAACTGCTTCAACCGTGGTTCTTGCCGAACAGCGTGTGGTAAAGATCGGTATccccaa > 2:5791922/1‑135 (MQ=255) | TGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCAGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGA > AE015451_phaM1/352934‑353200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |