Predicted mutation
evidence seq id position mutation annotation gene description
RA AE015451_phaM1 6,011,161 T→C intergenic (+90/+20) xpt CDS (Xanthine phosphoribosyltransferase) → / ← PP_5266 CDS (putative acetyl‑CoA hydrolase family protein) –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM16,011,1610TC100.0% 1689.2 / NA 430intergenic (+90/+20)xpt CDS (Xanthine phosphoribosyltransferase)/PP_5266 CDS (putative acetyl‑CoA hydrolase family protein)–/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (310/120);  total (310/120)

Only 100 of 430 total aligned reads displayed.

TGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGC  >  AE015451_phaM1/6011031‑6011292
                                                                                                                                   |                                                                                                                                   
tGAAGTCGTTGGAAGGTGGGGTGGTCAGTTCCATAGAAGAAACGCGACACTTGCTTCGCGGGCACGCCCGCCCCAACAGGTGCAGAACAGGTCTAGAACGCTGTGCCGTACTTGGGGGAGCGGGCGTGCCCGCGAAt                                                                                                                               <  1:15442326/137‑1 (MQ=25)
    gtcgtgggAAGGGGGTGGGTTAAGCTTCATCGAAGAAATGCGACACCTGTTTCGCGGGCACACCCGCTCCCACGGGTGCAGCACGGTTCTCGAACGCTGTGCCGTACTTGTGGGAGTGGGCGTGCCCGCGAATGGcc                                                                                                                           <  1:16272515/131‑1 (MQ=255)
    gTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGTTCTCGAACGTTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGcc                                                                                                                           <  2:16999332/137‑1 (MQ=255)
    gTCGCGGGAAGGTGGTGTGGTCAGTTCCGTCGAATAAACGCGACACCTTTTTCGCGGGCGCGCCCGCTCACACGGGTGCAGCACAGGTTTAGAACGCGGTGCCGTACTTGGGGGAGCGGGCGTGCCCGCGAATGGcc                                                                                                                           <  1:18027004/137‑1 (MQ=25)
    gTCGCGGGAAGGTGGTGTGGTCAGCTTCATCGAAGAAACGCGACACCTGTTTCGCGGGCACGCCCGCTCCCACGGGTGCAGCACAGGTCTCGAACTTTGTTCCGTACCTGGGGGAGCGGGCGTGCCCGCGAATGGcc                                                                                                                           <  1:4388956/137‑1 (MQ=37)
     tCGCTGGAAGGTGTTGGGGTCATTTTCATTGAATAAACGCGACACCTGCTTCGCGGACACGCCCGCTCCCACAGTTACAACACAGGTCTCCAACGCTGTGCCGCACCTTTGGGAGCGGGCGTGCCCGCGAATGGCCg                                                                                                                          <  1:10529872/137‑1 (MQ=25)
       gCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCTCTCCCACAGGTGTAGCACAGGTCTCGAACGCTGTTTCGTACCTGTGGGAGCGGGCGTGCCCGCGGATGGCcaca                                                                                                                        >  2:8569782/1‑137 (MQ=37)
                tggtgtggtCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTa                                                                                                               <  2:18460425/137‑1 (MQ=255)
                      ggtCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCACTTCCACCGAGTCCGAACCGATTTCTAACACTTTTCCATCCCTTTTGGAGGGGGCGTGCCCTCTAATTGTCGCAACCCCTTTTTCTTGt                                                                                                         >  1:9431468/1‑137 (MQ=255)
                        tCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCACTCCCACAAGTGCAGCACAAGTCTCAACCGCTGCGCCACACCTTTGGGAACGAGCATGCCCGCGCATTGCCGCAACCCGTTTCTCTGGTTg                                                                                                       >  2:17884070/1‑137 (MQ=255)
                             ttCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGGAGCACAGGTCTCGAACGCTGTGTCGTACCCGTGGGAGCGGGCGTGCCCACGAATGGCCGCAACCCTTTTCTCTGGTTgccgcc                                                                                                  >  2:11920149/1‑137 (MQ=38)
                             ttCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCACGAATGGCCGCAAACCTTTTATCTGGTTgtcgcc                                                                                                  >  2:18568154/1‑137 (MQ=255)
                                aTCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCACAGGTCTCGAACGCTGTGCCGTACCCGTGGGAACGGGCGTGGCCACGAATGGTCGCAACCCTTTTCCCTGGTTGCCGCCAGc                                                                                               >  2:8960886/1‑137 (MQ=37)
                                  cGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGGGCAGCACAGGTATAGAACGCTGTGTCATACCTGTGGGAGCGGGCGTGGCCGCGAATGGCCGAAAACCTTTTATCTGGTTGTAGCCAGccc                                                                                             >  2:13320850/1‑137 (MQ=37)
                                   gAATAAACGCGACACCTGCTTCGTGGGCACGCCCGCTCCCACGGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGGGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGcccc                                                                                            <  1:10194189/137‑1 (MQ=255)
                                   gAATAAACGCGACACCTGCTGCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGTTCTCAAACGCTGTACCGTACCTGTGGGAGTNGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGcccc                                                                                            <  1:15705488/137‑1 (MQ=38)
                                   gAATAAACGCGACACCGGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCGGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGcccc                                                                                            <  2:18127681/137‑1 (MQ=255)
                                    aaTAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCAAACGCGGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCg                                                                                           <  1:2149640/137‑1 (MQ=255)
                                         aCGTGACACCTGTTTTGCGGGCACGCCCGCTCCCACGTGTGCAGCACAGGTCTCGAACGTTGTGCTGTACTTGTGGGAGTGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaac                                                                                      <  1:4803294/137‑1 (MQ=38)
                                         aCGCGACACCTGCTTCGCGGGTACGCCCTCTCCCAAAAGTGTAGCACAGGTCTCTAACACTGTGCCGTACCTTTGGGAGCAGGCTTGCCCGCTAATGGTCTCAACCCCTTTGTCTGGTTGGCGCCAGCCCCGCcacc                                                                                      >  2:10397631/1‑135 (MQ=255)
                                            cgACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAATGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaac                                                                                   <  2:11138085/137‑1 (MQ=255)
                                             gACACCTTCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaaca                                                                                  <  2:3569192/137‑1 (MQ=255)
                                              acgccTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAACACATGTCTCAAACGTTTTTCTGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaacaa                                                                                 <  1:784169/134‑1 (MQ=25)
                                               cacCTGTTTCGTGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCGGTGCCGTACTTGGGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAg                                                                                <  2:7196569/137‑1 (MQ=38)
                                                         gcgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTaaa                                                                      <  1:8083925/137‑1 (MQ=255)
                                                         gcgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTaaa                                                                      <  1:3677786/137‑1 (MQ=255)
                                                         acgGACACACCCACCCCCACGGTTGCAGCACGGTCCTCGAACGCTGTTCCGTACCGTTGGGAGCGGCCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTaaa                                                                      <  1:4900882/136‑1 (MQ=255)
                                                          cgGGAACGCCCGCTCCAAGAGTGGCAGCAAAGTTTTCGAACGTTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAg                                                                     <  1:11079076/137‑1 (MQ=37)
                                                                 acccGCTCCAACAGGTGTAGCACAGTTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTtcttct                                                              <  2:6653677/136‑1 (MQ=39)
                                                                            caGGTGCAGCACAGGTCTCGAACGCTGTGCCGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGTTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTg                                                   <  2:12598144/137‑1 (MQ=255)
                                                                              ggTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCg                                                 <  2:1440570/137‑1 (MQ=255)
                                                                                  cagcaAAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                             <  1:17123213/137‑1 (MQ=255)
                                                                                   agcaCAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                            >  1:12785/1‑137 (MQ=255)
                                                                                    gcaCAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCGGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcc                                           >  2:6246441/1‑137 (MQ=255)
                                                                                     cacaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                          >  2:17509517/1‑137 (MQ=255)
                                                                                     cacaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                          >  2:5492375/1‑137 (MQ=255)
                                                                                      acaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                         >  2:16136501/1‑137 (MQ=255)
                                                                                      acaGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                         >  1:351049/1‑137 (MQ=255)
                                                                                        aGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCaa                                       >  2:11727156/1‑137 (MQ=255)
                                                                                          gTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGTGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACt                                     >  2:2303265/1‑137 (MQ=255)
                                                                                           tctcGAACGCTGTGCCGTACCTGTGGGAGTGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTg                                    <  2:1124335/137‑1 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGc                                   >  1:17897366/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAg                                                                     >  2:8032211/1‑102 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  2:12938080/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  1:11203369/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  1:13315993/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  2:16413131/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  2:15851512/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  2:15565103/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  2:4437325/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  1:3185869/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  2:7091030/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  1:6961523/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  1:6259266/1‑137 (MQ=255)
                                                                                             tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                  >  1:9975475/1‑137 (MQ=255)
                                                                                                  cGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGc                             >  1:11887738/1‑137 (MQ=255)
                                                                                                   gCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGcc                            >  2:7963660/1‑137 (MQ=255)
                                                                                                     tgtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGcccc                          >  1:759564/1‑137 (MQ=255)
                                                                                                      gtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCa                         <  1:5703823/137‑1 (MQ=255)
                                                                                                       tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                        >  2:5207757/1‑137 (MQ=255)
                                                                                                       tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                        >  2:10170447/1‑137 (MQ=255)
                                                                                                       tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                        >  1:18309173/1‑137 (MQ=255)
                                                                                                       tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                        >  1:13780504/1‑137 (MQ=255)
                                                                                                       tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                        >  2:17303398/1‑137 (MQ=255)
                                                                                                       tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                        >  2:2692951/1‑137 (MQ=255)
                                                                                                        gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAgg                       >  2:7427502/1‑137 (MQ=255)
                                                                                                         ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                      <  2:1268198/137‑1 (MQ=255)
                                                                                                         ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                      <  2:16640676/137‑1 (MQ=255)
                                                                                                         ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                      <  2:7590764/137‑1 (MQ=255)
                                                                                                         ccGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                      <  1:11615191/137‑1 (MQ=255)
                                                                                                          cGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTg                     >  1:14645050/1‑137 (MQ=255)
                                                                                                          cGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTg                     >  2:3003641/1‑137 (MQ=255)
                                                                                                          cGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTg                     >  2:13912642/1‑137 (MQ=255)
                                                                                                               ccgtgGGAGCGGGCGTGCCCGCGAATGGCCGCAACCATTTTATCTAGTTGCCGCCAGCCCCGCCAAAAACAAGCGCTGGTAAAGTTCGCCTTTAAGCCCCTGCGGCCGCCCCAACTGCATCCGACCCAAGTGGCttt                >  2:5816978/3‑137 (MQ=255)
                                                                                                                tgtgGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTc               <  1:8499293/137‑1 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTACGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:18498273/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  2:10684202/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  2:6048503/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:10841965/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:16642146/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:2578251/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:2821349/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:3992456/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:5262527/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:6590547/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  1:9788577/1‑137 (MQ=255)
                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCAGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc           >  2:9349593/1‑137 (MQ=255)
                                                                                                                       aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc         >  1:7162607/1‑137 (MQ=255)
                                                                                                                       aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCGGGTAAAGTTCTTCTTTAAGCCCCTGTGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc         >  2:1997334/1‑137 (MQ=255)
                                                                                                                        gCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAcccc        >  2:1687161/1‑137 (MQ=255)
                                                                                                                          gggCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTc      >  1:9156133/1‑137 (MQ=255)
                                                                                                                          gggCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTc      >  1:14901854/1‑137 (MQ=255)
                                                                                                                           ggCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTcc     >  2:13033683/1‑137 (MQ=255)
                                                                                                                            gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTcct    <  2:4027032/137‑2 (MQ=255)
                                                                                                                            gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCg    >  2:11396480/1‑137 (MQ=255)
                                                                                                                            gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCg    >  1:15023429/1‑137 (MQ=255)
                                                                                                                            gCGTGCCCGCGAATGGCCGCAAACCTCCTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCg    <  2:3238579/137‑1 (MQ=255)
                                                                                                                            gCGTGCCCGCGAATGGCAGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCg    >  2:14992145/1‑137 (MQ=255)
                                                                                                                             cGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCgg   >  1:10012069/1‑137 (MQ=255)
                                                                                                                              gTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGc  >  1:12579347/1‑137 (MQ=255)
                                                                                                                                   |                                                                                                                                   
TGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGC  >  AE015451_phaM1/6011031‑6011292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: