| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 5,674,751 | +G | intergenic (+113/+27) | rhlE‑II CDS (ATP‑dependent RNA helicase) → / ← yceI CDS (polyisoprene‑binding protein_ acidic stress response factor) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 5,674,750 | 1 | . | G | 99.2% | 3616.3 / 13.4 | 910 | intergenic (+112/+28) | rhlE‑II CDS (ATP‑dependent RNA helicase)/yceI CDS (polyisoprene‑binding protein_ acidic stress response factor) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (3/4); new base G (568/335); total (571/339) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 940 total aligned reads displayed.
AGCGCTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GCGCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGT > AE015451_phaM1/5674614‑5674879 | tgctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAGgc‑ggccc < 2:9657285/137‑5 (MQ=255) tgctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑ggccc < 1:710325/137‑5 (MQ=255) aTAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCa < 1:12036809/137‑1 (MQ=255) tAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCAGCTCCTGCATAGAATTTCTTGATCTCTACAGGAGCGGCCTTATGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAg > 2:3891045/1‑137 (MQ=38) aGAAGTACCGAGGTGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGa < 2:11853520/137‑1 (MQ=255) tACCTAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAACTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTa < 2:16063037/137‑1 (MQ=38) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTa < 2:6700150/137‑1 (MQ=255) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTa < 1:5142439/137‑1 (MQ=255) tACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTa < 2:3100146/137‑1 (MQ=255) aCCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTCCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTAc < 1:15780087/137‑1 (MQ=38) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACt > 1:18154622/1‑137 (MQ=255) gggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTg > 2:11279041/1‑137 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 1:15304850/137‑1 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 1:2427644/137‑1 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 1:2101486/137‑1 (MQ=255) ggggCTACTTCGCAGCCCTATCACGACACAATGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCACAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 2:17596633/137‑1 (MQ=38) gggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCt > 2:8333689/1‑137 (MQ=255) gggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCGACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCt < 1:16994045/137‑1 (MQ=255) gctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGGATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTc > 2:4508014/1‑137 (MQ=255) gctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTc > 1:13577044/1‑137 (MQ=255) cGCAGCCCTATCACGACACAATGCTGCTCCTACAGATAACTTCTTAATCTCTACCGGAGCGGCCTTGTTTCGTGATAGGGCCGCAAAGC‑GGCCCCTTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 2:14700154/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:3119455/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:14472229/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 2:11576989/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:17152066/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATGTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:10882205/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAACTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGAGAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:7725738/137‑1 (MQ=38) cGCAGACCTATCACGACACAAGGCCGCTCCTGCAGAGAATGTCTTGATCTCTACAGGAGCGGTCTGGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 2:16340338/137‑1 (MQ=38) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGaca > 1:18403176/1‑137 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGaca > 2:12015646/1‑137 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 1:4355144/137‑1 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 1:8522380/137‑1 (MQ=255) cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTAAAGGAGCGGCATTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtc > 2:13773649/1‑137 (MQ=255) caAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCA‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggt > 2:6270811/1‑137 (MQ=255) atgCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcc < 1:17564504/135‑1 (MQ=255) ccGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtccagg > 2:5151866/1‑137 (MQ=255) gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGt < 1:10705168/137‑1 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 2:9165962/137‑1 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 2:2714704/137‑1 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 2:7424408/137‑1 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 1:5969780/137‑1 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGGGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 1:4703420/137‑1 (MQ=255) ccTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTg > 1:11692288/1‑137 (MQ=255) ccTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTg < 1:14844128/137‑1 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat > 2:715475/1‑118 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 1:9717885/1‑137 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCATTGTGTCGTGATAGGGCCGCAAAGCGGCACAC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 2:16821142/1‑137 (MQ=255) gCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGa < 2:7869277/137‑1 (MQ=255) cAGAGAATTGCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGaa < 1:13976266/137‑1 (MQ=39) agaATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTa > 2:14066844/1‑137 (MQ=255) ttCTTGATCTCTACAGGAGCGGCCTTGTGTAGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGTTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAca > 2:13232798/1‑136 (MQ=255) aGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGa < 1:13114646/137‑1 (MQ=255) aGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGa < 1:3783799/137‑1 (MQ=255) gCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc < 2:14471233/137‑1 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 2:3341768/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:6766918/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:5013271/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:7345504/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTGAGCTGGCAGAAGTTACTTCTGCTTCACACCTTCGACACTGATATCCCGGTCCAGGGTCTGCGAAGTAGCACCAGGGCCTTTGATGCCGAAGTCgtt > 2:18800699/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGTAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:6979924/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGACATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:19222127/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGTCTTTGATGCCGAAGTCgtt > 2:2245389/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:18403550/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:19510430/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:12808591/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:12590207/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:10169287/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:5452257/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:5929045/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:15802865/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:16598669/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:8095999/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:7401072/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:15103831/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:6542155/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:1016286/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:10711966/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:1100476/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:5636479/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:4088046/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTACAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:12455702/1‑137 (MQ=255) tgtCGTGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcag < 1:14259664/137‑1 (MQ=255) tGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttca < 1:9206357/137‑1 (MQ=255) tGATAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttca < 1:17789517/137‑1 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTCCTTCTGCTTCACACCTTCGACCCTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 2:8769243/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:8842355/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:18922995/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:10348491/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:3525528/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:10007634/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:16177628/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 2:1803189/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:13749970/1‑137 (MQ=255) ggCCGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtgg < 1:2787740/137‑1 (MQ=255) ccGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 2:12962782/137‑1 (MQ=255) ccGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 2:1342095/137‑1 (MQ=255) ccGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTCTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 2:4911741/137‑1 (MQ=255) ccGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAACACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 1:16387408/137‑1 (MQ=255) cGCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtgg > 1:6294881/1‑137 (MQ=255) gCAAAGCGGCCCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtggt > 1:9472100/1‑137 (MQ=255) | AGCGCTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GCGCCC‑TCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGT > AE015451_phaM1/5674614‑5674879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |