| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,366,695 | Δ15,777 bp | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | 20 genes [PP_2964 CDS (putative transposase)], tnpC CDS (putative tnpA repressor TnpC), PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity), csoR CDS (putative repressor of copper utilisation proteins), PP_2970 CDS (conserved exported protein of unknown function), PP_2971 CDS (transposase), PP_2972 CDS (conserved protein of unknown function), dgkA‑II CDS (diacylglycerol kinase), PP_2974 CDS (putative sulfatase), PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3), PP_2976 CDS (putative transposase), PP_mr38 ncRNA (ALIL regulatory region), tnpB CDS (Tn4652_ transposase subunit B), PP_2978 CDS (conserved protein of unknown function), PP_2979 CDS (conserved protein of unknown function), PP_2980 CDS (conserved protein of unknown function), tnpS CDS (putative cointegrate resolution protein S), tnpT‑I CDS (putative cointegrate resolution protein T Tn4652), PP_2983 CDS (conserved protein of unknown function), [PP_2984 CDS (conserved protein of unknown function)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3366695 | 3382471 | 15777 | 931 [0] | [0] 923 | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | [PP_2964 CDS (putative transposase)],tnpC CDS (putative tnpA repressor TnpC),PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity),csoR CDS (putative repressor of copper utilisation proteins),PP_2970 CDS (conserved exported protein of unknown function),PP_2971 CDS (transposase),PP_2972 CDS (conserved protein of unknown function),dgkA‑II CDS (diacylglycerol kinase),PP_2974 CDS (putative sulfatase),PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3),PP_2976 CDS (putative transposase),PP_mr38 ncRNA (ALIL regulatory region),tnpB CDS (Tn4652_ transposase subunit B),PP_2978 CDS (conserved protein of unknown function),PP_2979 CDS (conserved protein of unknown function),PP_2980 CDS (conserved protein of unknown function),tnpS CDS (putative cointegrate resolution protein S),tnpT‑I CDS (putative cointegrate resolution protein T Tn4652),PP_2983 CDS (conserved protein of unknown function),[PP_2984 CDS (conserved protein of unknown function)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3366694 | 0 (0.000) | 902 (1.000) | 135/268 | 0.1 | 100% | intergenic (+360/‑1) | PP_2962 CDS (Alcohol dehydrogenase_ zinc‑containing)/PP_2964 CDS (putative transposase) | –/– |
| ? | AE015451_phaM1 | 3382472 = | 0 (0.000) | intergenic (+1/‑28) | PP_2984 CDS (conserved protein of unknown function)/PP_5545 CDS (protein of unknown function) | –/– | |||||
Only 100 of 930 total aligned reads displayed.
TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAGATATATGATTGAAAAGGTTATTCGAGATGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCTGTCTATGCTGATGCTTCTGCCTCGTTTGGGGG < 2:16075016/137‑1TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 2:10223859/137‑1 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:10530158/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:9738644/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:15516107/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:14353196/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:17909419/1‑137 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA < 1:10862426/137‑1 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 1:10341137/1‑137 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 2:6807436/1‑137 ATTAGGACATTTGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 1:6353757/137‑1 ATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 1:2012566/137‑1 ATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 1:9950161/137‑1 TTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGG < 1:9300830/137‑1 TTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG > 1:12518752/1‑136 AGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGAC < 2:7965002/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:17399482/137‑1 GACATTCGTTCTGTAAATATAGTATGTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCGTCCACCGTCTGGCTAGCCGTCTATGCTGATGCTGTGGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:19229930/137‑1 TCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAAT < 1:14032958/137‑1 CGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATG < 2:3568176/137‑1 TAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACT < 1:6716006/137‑1 TAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACT < 2:3831056/137‑1 TATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAAC > 1:11833366/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 1:6162187/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 1:9601209/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 2:12888793/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 2:3374155/1‑137 GGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGAC > 1:4711357/1‑137 GTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGTGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACG < 1:16431356/137‑1 GTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACG > 2:18725497/1‑137 TTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGA > 1:7857555/1‑137 TATTCGATAGACCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGTGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAGCAAATGACGACCGACGAT < 2:9318479/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 2:17774361/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:534723/137‑1 TTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTC > 1:7581663/1‑137 TTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTC > 1:14601001/1‑137 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 1:18435706/1‑137 CGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGC > 2:2390973/1‑137 GGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATC < 1:10656074/137‑1 CCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTA > 1:3604694/1‑137 CCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTA > 2:540554/1‑137 CGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAA > 2:15214141/1‑137 GTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAAC > 1:18889056/1‑137 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 1:2547977/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:14891463/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:6327176/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 2:4174734/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACAATTCGCTGATCTAACac < 2:12397184/137‑3 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAAGGACGACCGACGATTCGCTGATCTAACGC < 1:3183315/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTNTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:15764497/137‑1 TGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGA < 1:3966920/137‑1 CTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGG < 2:13850106/137‑1 CTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGG < 2:13622467/137‑1 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 1:9146650/1‑137 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 2:14567650/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTCTGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAACTGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:10018446/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGAACGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:13162281/1‑137 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 2:5845280/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:4479064/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:7128576/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:7349771/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 2:16867091/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA > 1:11366209/1‑137 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 2:1174718/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 2:8627352/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 2:8379309/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTNTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:19278219/137‑1 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:15996628/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:8923986/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:17384110/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGAAGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:2886580/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:1272001/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:12107734/1‑137 CTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGC > 2:11337949/1‑137 CTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGC > 2:15725537/1‑137 TAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCG < 1:15577210/137‑1 AGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:5720023/1‑110 GTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTT > 1:17031421/1‑137 TCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTG > 2:4308249/1‑137 TCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTG > 2:19489268/1‑137 TCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTG > 1:14292593/1‑137 TCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTG > 2:12536956/1‑137 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGCATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 2:16575829/137‑1 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 2:759758/137‑1 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 2:16322457/137‑1 GCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 2:10622068/1‑137 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC < 2:9040287/137‑1 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG < 1:8262481/137‑1 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG > 2:2911157/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG > 2:14886089/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG > 2:18299315/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 2:6075724/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 2:7154272/1‑137 CCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTG < 1:8089006/137‑1 CCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTG < 2:11242339/137‑1 CCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTG > 2:13316229/1‑137 GGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGAT > 1:13644389/1‑137 GCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > 2:5045623/1‑137 GCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG < 2:11045294/137‑1 GCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG < 1:5013226/137‑1 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |