| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,484,017 | Δ244,813 bp | [PP_3091 CDS (conserved membrane protein of unknown function)]–[PP_3294 CDS (Universal stress protein family)] | 233 genes [PP_3091 CDS (conserved membrane protein of unknown function)], PP_3092 CDS (conserved protein of unknown function), PP_3093 CDS (conserved protein of unknown function), PP_3094 CDS (conserved exported protein of unknown function), clpV CDS (Protein ClpV1), PP_3096 CDS (conserved protein of unknown function), PP_3097 CDS (conserved protein of unknown function), PP_3098 CDS (conserved protein of unknown function), puuD CDS (uricase_urate oxidase), PP_3100 CDS (conserved protein of unknown function), PP_5562 CDS (conserved protein of unknown function), PP_5563 CDS (conserved membrane protein of unknown function), PP_5565 CDS (conserved protein of unknown function), PP_5566 CDS (protein of unknown function), PP_5567 CDS (protein of unknown function), PP_5568 CDS (conserved membrane protein of unknown function), PP_5569 CDS (protein of unknown function of phage origin), PP_5571 CDS (conserved protein of unknown function), PP_5572 CDS (protein of unknown function), PP_5573 CDS (protein of unknown function), PP_3102 CDS (conserved protein of unknown function), PP_3103 CDS (conserved protein of unknown function), PP_5574 CDS (conserved protein of unknown function), PP_3104 CDS (conserved protein of unknown function), PP_3105 CDS (conserved membrane protein of unknown function), PP_3106 CDS (conserved protein of unknown function), PP_5575 CDS (conserved protein of unknown function), PP_3107 CDS (conserved protein of unknown function), PP_3108 CDS (Rhs‑related protein), PP_5576 CDS (conserved protein of unknown function), PP_5578 CDS (conserved protein of unknown function), PP_3109 CDS (conserved protein of unknown function), PP_5579 CDS (conserved protein of unknown function), PP_5580 CDS (protein of unknown function), PP_5582 CDS (conserved protein of unknown function), PP_5583 CDS (conserved protein of unknown function), PP_3110 CDS (protein of unknown function), PP_5584 CDS (protein of unknown function), PP_3113 CDS (transposase), PP_3114 CDS (transposase), PP_3115 CDS (transposase), lexA‑II CDS (transcriptional repressor), PP_3117 CDS (putative protein involved in error‑prone processing of DNA lesions), imuB CDS (DNA linked enzyme involved in DNA repair), dnaEB CDS (error‑prone DNA polymerase), yeaE CDS (methylglyoxal reductase), PP_3121 CDS (transcriptional regulator_ LysR family), atoA CDS (acetoacetyl CoA‑transferase (subunit A)), atoB CDS (acetoacetyl CoA‑transferase (subunit B)), PP_3124 CDS (putative short chain fatty acid transporter), PP_3125 CDS (putative transcriptional regulator (Cro_CI family)), PP_5586 CDS (exported protein of unknown function), PP_3126 CDS (putative polysaccharide exported protein), PP_5587 CDS (conserved protein of unknown function), PP_3127 CDS (putative Exopolysaccharide transport protein), PP_3128 CDS (putative Exopolysaccharide biosynthesis_transport protein), galE CDS (UDP‑glucose 4‑epimerase), PP_3130 CDS (conserved exported protein of unknown function), PP_3131 CDS (conserved membrane protein of unknown function), PP_3132 CDS (putative Polysaccharide transporter), PP_5588 CDS (conserved protein of unknown function), PP_3133 CDS (putative Oxidoreductase), PP_3134 CDS (conserved protein of unknown function), PP_3135 CDS (putative Glycosyl transferase), PP_3136 CDS (putative O‑acetyltransferase), PP_3137 CDS (Glycosyl transferase_ group 2 family protein), PP_3138 CDS (VirK domain protein), PP_3139 CDS (Glycosyl transferase_ group 1 family protein), PP_3140 CDS (Glycosyl transferase_ group 2 family protein), PP_3141 CDS (Glycosyl transferase_ WecB_TagA_CpsF family), PP_3142 CDS (putative Sugar transferase), PP_3143 CDS (Transcriptional regulator_ LysR family), tdcG‑III CDS (L‑serine dehydratase), PP_3145 CDS (conserved protein of unknown function), PP_3146 CDS (putative Oxidoreductase), potF‑II CDS (putrescine‑binding periplasmic protein), PP_3148 CDS (putative Glutamine synthetase), PP_3149 CDS (Transcriptional regulator_ AraC family), PP_3150 CDS (conserved protein of unknown function), sad‑II CDS (NAD+‑dependent succinate semialdehyde dehydrogenase), yneJ CDS (putative DNA‑binding transcriptional regulator_ LysR‑type), PP_3153 CDS (conserved exported protein of unknown function), pagL‑II CDS (lipid A 3‑O‑deacylase), PP_3155 CDS (putative Outer membrane ferric siderophore receptor), PP_3156 CDS (Universal stress protein family), PP_3157 CDS (Inositol monophosphatase family protein), PP_3158 CDS (conserved exported protein of unknown function), PP_5589 CDS (protein of unknown function containing Rhs repeat‑associated core domain), benR CDS (BenABC operon transcriptional activator), PP_3160 CDS (conserved protein of unknown function), benA CDS (benzoate 1_2‑dioxygenase subunit alpha), benB CDS (benzoate 1_2‑dioxygenase subunit beta), benC CDS (benzoate 1_2‑dioxygenase electron transfer component), benD CDS (1_6‑dihydroxycyclohexa‑2_4‑diene‑1‑carboxylate dehydrogenase), benK CDS (benzoate MFS transporter), catA‑II CDS (catechol 1_2‑dioxygenase), benE‑II CDS (benzoate transport protein), nicP‑I CDS (porin‑like protein), PP_3169 CDS (conserved membrane protein of unknown function), PP_3170 CDS (Transcriptional regulator_ LysR family), PP_3171 CDS (conserved protein of unknown function), PP_3172 CDS (Group II intron‑encoding maturase), nemA CDS (N‑ethylmaleimide reductase_ FMN‑linked), PP_3174 CDS (putative Oxidoreductase), PP_3175 CDS (putative Dioxygenase_ ferredoxin reductase component), PP_3176 CDS (Major facilitator family transporter), PP_3177 CDS (conserved protein of unknown function), garK CDS (glycerate kinase), PP_3179 CDS (Transcriptional regulator_ LysR family), PP_3180 CDS (Smp‑30_Cgr1 family protein), PP_3181 CDS (Site‑specific recombinase_ phage integrase family), PP_3182 CDS (GGDEF domain protein), PP_3183 CDS (SCO1_SenC family protein_cytochrome c), mcoA CDS (Mn(II) copper oxidase A), PP_mr40 ncRNA (TPP regulatory region), pet CDS (Pet18 protein), PP_3186 CDS (putative Transcriptional activator), codB CDS (Cytosine transporter), PP_3188 CDS (conserved protein of unknown function), codA CDS (cytosine deaminase _ isoguanine deaminase), PP_3190 CDS (Ornithine cyclodeaminase_mu‑crystallin family protein), PP_3191 CDS (putative threonine ammonia‑lyase _ dehydratase), PP_3192 CDS (conserved protein of unknown function), PP_3193 CDS (conserved protein of unknown function), PP_3194 CDS (conserved protein of unknown function), PP_3195 CDS (conserved protein of unknown function), PP_3196 CDS (Nodulation protein d1), PP_3197 CDS (Glyoxalase family protein), PP_3198 CDS (Ferredoxin_ 2Fe‑2S), PP_3199 CDS (putative Monooxygenase), PP_3200 CDS (conserved exported protein of unknown function), PP_5590 CDS (conserved exported protein of unknown function), PP_3201 CDS (BNR domain protein), PP_3202 CDS (putative Transporter), PP_3203 CDS (Major facilitator family transporter), PP_3204 CDS (conserved protein of unknown function), PP_3205 CDS (Fumarylacetoacetate hydrolase family protein), PP_3206 CDS (conserved protein of unknown function), PP_3207 CDS (putative Cyclase), PP_3208 CDS (Oxidoreductase_ Pdr_VanB family), PP_3209 CDS (Isoxanthopterin deaminase), PP_3210 CDS (ABC transporter_ permease protein), PP_3211 CDS (ABC transporter_ ATP‑binding protein), PP_3212 CDS (Rieske 2Fe‑2S family protein), PP_3213 CDS (ABC transporter_ periplasmic binding component‑related protein), PP_3214 CDS (conserved exported protein of unknown function), PP_3216 CDS (putative cysteine dioxygenase), PP_3217 CDS (putative Periplasmic aliphatic sulfonate‑binding protein), PP_3218 CDS (Monooxygenase_ NtaA_SnaA_SoxA family), PP_3219 CDS (putative Alkansulfonate monooxygenase), PP_3220 CDS (ABC transporter_ ATP‑binding protein), PP_3221 CDS (ABC transporter_ permease protein), PP_3222 CDS (ABC transporter_ permease protein), PP_3223 CDS (ABC transporter_ periplasmic binding protein), PP_3224 CDS (Class II aldolase_adducin domain protein), PP_3225 CDS (D‑isomer specific 2‑hydroxyacid dehydrogenase family protein), PP_3226 CDS (Acyl‑CoA dehydrogenase‑related protein), PP_3227 CDS (Transcriptional regulator_ LysR family), PP_3228 CDS (putative Periplasmic aliphatic sulfonate‑binding protein), PP_3229 CDS (putative Periplasmic aliphatic sulfonate‑binding protein), PP_3230 CDS (Phosphoribosyl transferase domain protein), PP_3231 CDS (conserved protein of unknown function), PP_3232 CDS (Acetyltransferase_ GNAT family), fnrB CDS (transcriptional regulator with 4Fe‑4S cluster_ Crp_Fnr family), PP_5591 CDS (conserved protein of unknown function), PP_3234 CDS (Heat shock protein_ HSP20 family), PP_3235 CDS (conserved protein of unknown function), PP_3236 CDS (putative Lipoprotein OprI), PP_3237 CDS (Universal stress protein family), PP_3238 CDS (putative Transcriptional regulator PyrR), tnpT‑II CDS (putative cointegrate resolution protein T Tn4652), PP_3240 CDS (conserved protein of unknown function), PP_5592 CDS (conserved protein of unknown function), PP_3241 CDS (conserved exported protein of unknown function), PP_3242 CDS (GGDEF domain protein), PP_3243 CDS (Acetyltransferase_ GNAT family), mgtC CDS (Magnesium transporter_ MgtC family), PP_3245 CDS (conserved protein of unknown function), crtZ CDS (Beta‑carotene hydroxylase), PP_3247 CDS (Transporter_ bile acid_Na+ symporter family), PP_3248 CDS (Dyp‑type peroxidase family protein), PP_3249 CDS (putative oxidoreductase), PP_3250 CDS (putative Transporter), PP_5593 CDS (conserved protein of unknown function), PP_5594 CDS (conserved protein of unknown function), PP_3251 CDS (conserved protein of unknown function), PP_3252 CDS (Modification methylase_ HemK family), PP_3253 CDS (Carboxylate‑amine ligase PP_3253), PP_3254 CDS (putative Nucleosidase), PP_3255 CDS (non‑homologous end joining protein), PP_3256 CDS (Glycosyl transferase_ group 2 family protein), PP_3257 CDS (putative Methyltransferase), PP_3258 CDS (conserved protein of unknown function), PP_3259 CDS (Acyl‑CoA dehydrogenase‑related protein), ligD CDS (DNA ligase D), PP_3261 CDS (conserved protein of unknown function), PP_3262 CDS (putative Metallothionein), PP_5595 CDS (conserved exported protein of unknown function), ybhN CDS (phospholipid modification enzyme), clsB CDS (cardiolipin synthase 2), ybhP‑I CDS (putative phosphohydrolase of unknown function), PP_3266 CDS (conserved protein of unknown function), PP_3267 CDS (putative Clp protease), PP_3268 CDS (MutT_nudix family protein), PP_3269 CDS (conserved protein of unknown function), PP_5596 CDS (conserved protein of unknown function), PP_5597 CDS (conserved protein of unknown function), paaZ CDS (oxepin‑CoA hydrolase_3‑oxo‑5_6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase), phaK CDS (phenylacetic acid‑specific porin), actP‑III CDS (acetate permease), PP_3273 CDS (conserved protein of unknown function), paaE CDS (ring 1_2‑phenylacetyl‑CoA epoxidase_ reductase subunit), paaD CDS (putative subunit of phenylacetate degradation enzyme), paaC CDS (ring 1_2‑phenylacetyl‑CoA epoxidase beta subunit), paaB CDS (ring 1_2‑phenylacetyl‑CoA epoxidase regulatory subunit), paaA CDS (ring 1_2‑phenylacetyl‑CoA epoxidase alpha subunit), paaK CDS (phenylacetate‑CoA ligase), paaJ CDS (3‑oxoadipyl‑CoA_3‑oxo‑5_6‑dehydrosuberyl‑CoA thiolase), paaI CDS (hydroxyphenylacetyl‑CoA thioesterase), paaH CDS (3‑hydroxyadipyl‑CoA dehydrogenase), paaG CDS (1_2‑epoxyphenylacetyl‑CoA isomerase), paaF CDS (enoyl‑CoA hydratase‑isomerase), paaY CDS (detoxifying thioesterase of the phenylacetate degradation pathway), paaX CDS (DNA‑binding transcriptional repressor PaaX(phenylacetyl‑CoA)), fnrC CDS (transcriptional regulator with 4Fe‑4S cluster; Crp_Fnr family), PP_5598 CDS (conserved protein of unknown function), PP_3288 CDS (Universal stress protein family), PP_3289 CDS (Acetyltransferase_ GNAT family), PP_3290 CDS (Universal stress protein family), PP_3291 CDS (Metallo‑beta‑lactamase family protein), PP_3292 CDS (conserved membrane protein of unknown function), PP_3293 CDS (conserved membrane protein of unknown function), [PP_3294 CDS (Universal stress protein family)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3484017 | 3728829 | 244813 | 1043 [0] | [0] 1042 | [PP_3091 CDS (conserved membrane protein of unknown function)]–[PP_3294 CDS (Universal stress protein family)] | [PP_3091 CDS (conserved membrane protein of unknown function)],PP_3092 CDS (conserved protein of unknown function),PP_3093 CDS (conserved protein of unknown function),PP_3094 CDS (conserved exported protein of unknown function),clpV CDS (Protein ClpV1),PP_3096 CDS (conserved protein of unknown function),PP_3097 CDS (conserved protein of unknown function),PP_3098 CDS (conserved protein of unknown function),puuD CDS (uricase_urate oxidase),PP_3100 CDS (conserved protein of unknown function),PP_5562 CDS (conserved protein of unknown function),PP_5563 CDS (conserved membrane protein of unknown function),PP_5565 CDS (conserved protein of unknown function),PP_5566 CDS (protein of unknown function),PP_5567 CDS (protein of unknown function),PP_5568 CDS (conserved membrane protein of unknown function),PP_5569 CDS (protein of unknown function of phage origin),PP_5571 CDS (conserved protein of unknown function),PP_5572 CDS (protein of unknown function),PP_5573 CDS (protein of unknown function),PP_3102 CDS (conserved protein of unknown function),PP_3103 CDS (conserved protein of unknown function),PP_5574 CDS (conserved protein of unknown function),PP_3104 CDS (conserved protein of unknown function),PP_3105 CDS (conserved membrane protein of unknown function),PP_3106 CDS (conserved protein of unknown function),PP_5575 CDS (conserved protein of unknown function),PP_3107 CDS (conserved protein of unknown function),PP_3108 CDS (Rhs‑related protein),PP_5576 CDS (conserved protein of unknown function),PP_5578 CDS (conserved protein of unknown function),PP_3109 CDS (conserved protein of unknown function),PP_5579 CDS (conserved protein of unknown function),PP_5580 CDS (protein of unknown function),PP_5582 CDS (conserved protein of unknown function),PP_5583 CDS (conserved protein of unknown function),PP_3110 CDS (protein of unknown function),PP_5584 CDS (protein of unknown function),PP_3113 CDS (transposase),PP_3114 CDS (transposase),PP_3115 CDS (transposase),lexA‑II CDS (transcriptional repressor),PP_3117 CDS (putative protein involved in error‑prone processing of DNA lesions),imuB CDS (DNA linked enzyme involved in DNA repair),dnaEB CDS (error‑prone DNA polymerase),yeaE CDS (methylglyoxal reductase),PP_3121 CDS (transcriptional regulator_ LysR family),atoA CDS (acetoacetyl CoA‑transferase (subunit A)),atoB CDS (acetoacetyl CoA‑transferase (subunit B)),PP_3124 CDS (putative short chain fatty acid transporter),PP_3125 CDS (putative transcriptional regulator (Cro_CI family)),PP_5586 CDS (exported protein of unknown function),PP_3126 CDS (putative polysaccharide exported protein),PP_5587 CDS (conserved protein of unknown function),PP_3127 CDS (putative Exopolysaccharide transport protein),PP_3128 CDS (putative Exopolysaccharide biosynthesis_transport protein),galE CDS (UDP‑glucose 4‑epimerase),PP_3130 CDS (conserved exported protein of unknown function),PP_3131 CDS (conserved membrane protein of unknown function),PP_3132 CDS (putative Polysaccharide transporter),PP_5588 CDS (conserved protein of unknown function),PP_3133 CDS (putative Oxidoreductase),PP_3134 CDS (conserved protein of unknown function),PP_3135 CDS (putative Glycosyl transferase),PP_3136 CDS (putative O‑acetyltransferase),PP_3137 CDS (Glycosyl transferase_ group 2 family protein),PP_3138 CDS (VirK domain protein),PP_3139 CDS (Glycosyl transferase_ group 1 family protein),PP_3140 CDS (Glycosyl transferase_ group 2 family protein),PP_3141 CDS (Glycosyl transferase_ WecB_TagA_CpsF family),PP_3142 CDS (putative Sugar transferase),PP_3143 CDS (Transcriptional regulator_ LysR family),tdcG‑III CDS (L‑serine dehydratase),PP_3145 CDS (conserved protein of unknown function),PP_3146 CDS (putative Oxidoreductase),potF‑II CDS (putrescine‑binding periplasmic protein),PP_3148 CDS (putative Glutamine synthetase),PP_3149 CDS (Transcriptional regulator_ AraC family),PP_3150 CDS (conserved protein of unknown function),sad‑II CDS (NAD+‑dependent succinate semialdehyde dehydrogenase),yneJ CDS (putative DNA‑binding transcriptional regulator_ LysR‑type),PP_3153 CDS (conserved exported protein of unknown function),pagL‑II CDS (lipid A 3‑O‑deacylase),PP_3155 CDS (putative Outer membrane ferric siderophore receptor),PP_3156 CDS (Universal stress protein family),PP_3157 CDS (Inositol monophosphatase family protein),PP_3158 CDS (conserved exported protein of unknown function),PP_5589 CDS (protein of unknown function containing Rhs repeat‑associated core domain),benR CDS (BenABC operon transcriptional activator),PP_3160 CDS (conserved protein of unknown function),benA CDS (benzoate 1_2‑dioxygenase subunit alpha),benB CDS (benzoate 1_2‑dioxygenase subunit beta),benC CDS (benzoate 1_2‑dioxygenase electron transfer component),benD CDS (1_6‑dihydroxycyclohexa‑2_4‑diene‑1‑carboxylate dehydrogenase),benK CDS (benzoate MFS transporter),catA‑II CDS (catechol 1_2‑dioxygenase),benE‑II CDS (benzoate transport protein),nicP‑I CDS (porin‑like protein),PP_3169 CDS (conserved membrane protein of unknown function),PP_3170 CDS (Transcriptional regulator_ LysR family),PP_3171 CDS (conserved protein of unknown function),PP_3172 CDS (Group II intron‑encoding maturase),nemA CDS (N‑ethylmaleimide reductase_ FMN‑linked),PP_3174 CDS (putative Oxidoreductase),PP_3175 CDS (putative Dioxygenase_ ferredoxin reductase component),PP_3176 CDS (Major facilitator family transporter),PP_3177 CDS (conserved protein of unknown function),garK CDS (glycerate kinase),PP_3179 CDS (Transcriptional regulator_ LysR family),PP_3180 CDS (Smp‑30_Cgr1 family protein),PP_3181 CDS (Site‑specific recombinase_ phage integrase family),PP_3182 CDS (GGDEF domain protein),PP_3183 CDS (SCO1_SenC family protein_cytochrome c),mcoA CDS (Mn(II) copper oxidase A),PP_mr40 ncRNA (TPP regulatory region),pet CDS (Pet18 protein),PP_3186 CDS (putative Transcriptional activator),codB CDS (Cytosine transporter),PP_3188 CDS (conserved protein of unknown function),codA CDS (cytosine deaminase _ isoguanine deaminase),PP_3190 CDS (Ornithine cyclodeaminase_mu‑crystallin family protein),PP_3191 CDS (putative threonine ammonia‑lyase _ dehydratase),PP_3192 CDS (conserved protein of unknown function),PP_3193 CDS (conserved protein of unknown function),PP_3194 CDS (conserved protein of unknown function),PP_3195 CDS (conserved protein of unknown function),PP_3196 CDS (Nodulation protein d1),PP_3197 CDS (Glyoxalase family protein),PP_3198 CDS (Ferredoxin_ 2Fe‑2S),PP_3199 CDS (putative Monooxygenase),PP_3200 CDS (conserved exported protein of unknown function),PP_5590 CDS (conserved exported protein of unknown function),PP_3201 CDS (BNR domain protein),PP_3202 CDS (putative Transporter),PP_3203 CDS (Major facilitator family transporter),PP_3204 CDS (conserved protein of unknown function),PP_3205 CDS (Fumarylacetoacetate hydrolase family protein),PP_3206 CDS (conserved protein of unknown function),PP_3207 CDS (putative Cyclase),PP_3208 CDS (Oxidoreductase_ Pdr_VanB family),PP_3209 CDS (Isoxanthopterin deaminase),PP_3210 CDS (ABC transporter_ permease protein),PP_3211 CDS (ABC transporter_ ATP‑binding protein),PP_3212 CDS (Rieske 2Fe‑2S family protein),PP_3213 CDS (ABC transporter_ periplasmic binding component‑related protein),PP_3214 CDS (conserved exported protein of unknown function),PP_3216 CDS (putative cysteine dioxygenase),PP_3217 CDS (putative Periplasmic aliphatic sulfonate‑binding protein),PP_3218 CDS (Monooxygenase_ NtaA_SnaA_SoxA family),PP_3219 CDS (putative Alkansulfonate monooxygenase),PP_3220 CDS (ABC transporter_ ATP‑binding protein),PP_3221 CDS (ABC transporter_ permease protein),PP_3222 CDS (ABC transporter_ permease protein),PP_3223 CDS (ABC transporter_ periplasmic binding protein),PP_3224 CDS (Class II aldolase_adducin domain protein),PP_3225 CDS (D‑isomer specific 2‑hydroxyacid dehydrogenase family protein),PP_3226 CDS (Acyl‑CoA dehydrogenase‑related protein),PP_3227 CDS (Transcriptional regulator_ LysR family),PP_3228 CDS (putative Periplasmic aliphatic sulfonate‑binding protein),PP_3229 CDS (putative Periplasmic aliphatic sulfonate‑binding protein),PP_3230 CDS (Phosphoribosyl transferase domain protein),PP_3231 CDS (conserved protein of unknown function),PP_3232 CDS (Acetyltransferase_ GNAT family),fnrB CDS (transcriptional regulator with 4Fe‑4S cluster_ Crp_Fnr family),PP_5591 CDS (conserved protein of unknown function),PP_3234 CDS (Heat shock protein_ HSP20 family),PP_3235 CDS (conserved protein of unknown function),PP_3236 CDS (putative Lipoprotein OprI),PP_3237 CDS (Universal stress protein family),PP_3238 CDS (putative Transcriptional regulator PyrR),tnpT‑II CDS (putative cointegrate resolution protein T Tn4652),PP_3240 CDS (conserved protein of unknown function),PP_5592 CDS (conserved protein of unknown function),PP_3241 CDS (conserved exported protein of unknown function),PP_3242 CDS (GGDEF domain protein),PP_3243 CDS (Acetyltransferase_ GNAT family),mgtC CDS (Magnesium transporter_ MgtC family),PP_3245 CDS (conserved protein of unknown function),crtZ CDS (Beta‑carotene hydroxylase),PP_3247 CDS (Transporter_ bile acid_Na+ symporter family),PP_3248 CDS (Dyp‑type peroxidase family protein),PP_3249 CDS (putative oxidoreductase),PP_3250 CDS (putative Transporter),PP_5593 CDS (conserved protein of unknown function),PP_5594 CDS (conserved protein of unknown function),PP_3251 CDS (conserved protein of unknown function),PP_3252 CDS (Modification methylase_ HemK family),PP_3253 CDS (Carboxylate‑amine ligase PP_3253),PP_3254 CDS (putative Nucleosidase),PP_3255 CDS (non‑homologous end joining protein),PP_3256 CDS (Glycosyl transferase_ group 2 family protein),PP_3257 CDS (putative Methyltransferase),PP_3258 CDS (conserved protein of unknown function),PP_3259 CDS (Acyl‑CoA dehydrogenase‑related protein),ligD CDS (DNA ligase D),PP_3261 CDS (conserved protein of unknown function),PP_3262 CDS (putative Metallothionein),PP_5595 CDS (conserved exported protein of unknown function),ybhN CDS (phospholipid modification enzyme),clsB CDS (cardiolipin synthase 2),ybhP‑I CDS (putative phosphohydrolase of unknown function),PP_3266 CDS (conserved protein of unknown function),PP_3267 CDS (putative Clp protease),PP_3268 CDS (MutT_nudix family protein),PP_3269 CDS (conserved protein of unknown function),PP_5596 CDS (conserved protein of unknown function),PP_5597 CDS (conserved protein of unknown function),paaZ CDS (oxepin‑CoA hydrolase_3‑oxo‑5_6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase),phaK CDS (phenylacetic acid‑specific porin),actP‑III CDS (acetate permease),PP_3273 CDS (conserved protein of unknown function),paaE CDS (ring 1_2‑phenylacetyl‑CoA epoxidase_ reductase subunit),paaD CDS (putative subunit of phenylacetate degradation enzyme),paaC CDS (ring 1_2‑phenylacetyl‑CoA epoxidase beta subunit),paaB CDS (ring 1_2‑phenylacetyl‑CoA epoxidase regulatory subunit),paaA CDS (ring 1_2‑phenylacetyl‑CoA epoxidase alpha subunit),paaK CDS (phenylacetate‑CoA ligase),paaJ CDS (3‑oxoadipyl‑CoA_3‑oxo‑5_6‑dehydrosuberyl‑CoA thiolase),paaI CDS (hydroxyphenylacetyl‑CoA thioesterase),paaH CDS (3‑hydroxyadipyl‑CoA dehydrogenase),paaG CDS (1_2‑epoxyphenylacetyl‑CoA isomerase),paaF CDS (enoyl‑CoA hydratase‑isomerase),paaY CDS (detoxifying thioesterase of the phenylacetate degradation pathway),paaX CDS (DNA‑binding transcriptional repressor PaaX(phenylacetyl‑CoA)),fnrC CDS (transcriptional regulator with 4Fe‑4S cluster; Crp_Fnr family),PP_5598 CDS (conserved protein of unknown function),PP_3288 CDS (Universal stress protein family),PP_3289 CDS (Acetyltransferase_ GNAT family),PP_3290 CDS (Universal stress protein family),PP_3291 CDS (Metallo‑beta‑lactamase family protein),PP_3292 CDS (conserved membrane protein of unknown function),PP_3293 CDS (conserved membrane protein of unknown function),[PP_3294 CDS (Universal stress protein family)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3484016 | 0 (0.000) | 916 (1.020) | 117/266 | 0.4 | 100% | coding (1908/3804 nt) | PP_3091 CDS (conserved membrane protein of unknown function) | |
| ? | AE015451_phaM1 | 3728830 = | 0 (0.000) | coding (701/891 nt) | PP_3294 CDS (Universal stress protein family) | ||||||
Only 100 of 1045 total aligned reads displayed.
GTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3483879‑3484016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT > AE015451_phaM1/3728830‑3728965 TCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGG < 1:1299123/137‑1 CGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGC > 2:4889353/1‑137 GCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCA < 2:9764288/137‑1 CGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCA < 2:13239375/137‑1 GGCGCTGGCCCAGGCCTGGTGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAG < 2:1725776/137‑1 GGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAG < 1:5559309/137‑1 GGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAG < 2:14526024/137‑1 GGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAG < 1:10561716/137‑1 CGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCG > 2:2959887/1‑137 CGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCG > 2:18168214/1‑137 CGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCG > 1:11653000/1‑137 CGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCG > 1:14819023/1‑137 CGCTGGCCCAGGCCTGGGGCAAGCTGGCAGCGACGAAGGCCGAGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCCTGAGGGCGTTGTAGTCCTCGATAATCGAAGCCACCTGCACCGGCATCTCAGCG > 2:15130981/1‑137 CTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAA < 1:15816019/137‑1 GCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGT > 1:7009699/1‑137 CTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGTCTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCT > 2:10126686/1‑137 CTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCCCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCT > 2:3921376/1‑137 GGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGC < 2:8077668/137‑1 gccGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCACCAGGTACAGCTTGAAGGTGTTGTCGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCACG > 2:838515/4‑137 GCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCG > 1:8596558/1‑137 GCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCG > 1:2927711/1‑137 CAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGT > 1:4489659/1‑137 CAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGT > 2:10695236/1‑137 AGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTG < 2:12417228/137‑1 AGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTG < 2:8744599/137‑1 AGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTG < 2:9062804/137‑1 TGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCA > 2:16985489/1‑137 TGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCA > 2:5526224/1‑137 AAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATC > 1:7512781/1‑137 AAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATC > 1:657136/1‑137 AAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATC < 1:4919955/137‑1 AAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAACTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGTGCCCCTGCGCGTGATCAAGTCCTAAATC > 2:15591293/1‑137 TGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAA < 1:12816040/137‑1 GGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTG < 1:9809764/137‑1 GGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTG < 1:17348657/137‑1 GGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTG < 1:10783637/137‑1 CCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATG < 1:7770114/137‑1 TGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCA < 1:10215028/137‑1 TGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCA < 1:8918252/137‑1 TGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCA < 2:7309649/137‑1 TGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCA < 1:1936707/137‑1 TGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCCGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCA > 1:2109976/1‑137 TGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCATGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCA > 2:4265080/1‑137 CTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGT > 1:13785078/1‑137 CTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGT < 2:11512467/137‑1 CTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGT > 2:4622987/1‑137 CTCGGTCAACAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGT > 2:17828104/1‑137 GTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTC < 2:12778476/137‑1 TCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGATGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAATTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCG < 1:12116519/137‑1 TCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCG > 1:3368052/1‑137 TCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCG > 1:17799326/1‑137 TCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCG > 2:15418584/1‑137 TCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCG > 1:16219468/1‑137 TCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCG < 2:6041539/137‑1 TCAGCAACAGGTACAGCTTGAGGGTGTCGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCG > 2:18656159/1‑137 CAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGG > 2:34958/1‑137 AACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACC > 2:9500464/1‑137 AACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACC < 2:15947935/137‑1 AACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACC < 1:18424039/137‑1 CAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGTTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCATGCTGAAAATTGATGCAGTGGTGGTCGGCACCGT > 2:1111989/1‑137 TTGGGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCAGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGTAGTGGTGGTCGGCACCGTGCAGCCCAGG > 2:11944083/1‑137 TTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGG < 2:2585012/137‑1 GGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATT > 1:15113903/1‑137 GGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTG > 1:11222722/1‑137 GTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGG < 1:11456198/137‑1 GTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGG > 1:2531928/1‑137 GTGTTGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGG > 1:18871117/1‑137 TGTAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCA > 1:1817204/1‑137 TAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAG > 2:7688981/1‑137 TAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAG > 1:8277530/1‑137 TAGGCCTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAG > 1:10093330/1‑137 TAGGCCTCGATGATCGAGGCCAACTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAG > 2:16258524/1‑137 CTCGATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGAT < 1:14585810/137‑1 GATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGG > 1:14096692/1‑137 GATGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGG > 2:1913123/1‑137 TGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCG > 2:8906036/1‑137 TGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCG > 1:4167406/1‑137 TGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCG > 1:16634951/1‑137 TGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCG > 2:10387080/1‑137 TGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCG > 1:17633169/1‑137 TGATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCG > 1:15484293/1‑137 GATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGA > 1:957953/1‑137 ATCGAGGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGAT > 1:6232919/1‑137 GGCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCAC > 2:6182066/1‑137 GCCACCTGCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACC < 2:2247349/137‑1 GCACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGC > 2:13054491/1‑137 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 1:13321015/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 1:12400900/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 1:386893/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 2:16561343/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 2:6705226/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 2:6951666/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 2:17450924/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 1:13616002/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 1:9189670/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 2:19434663/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 2:1406848/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 2:13601144/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 1:5324136/137‑1 CACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT < 1:16985509/137‑1 GTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3483879‑3484016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcACCGGCATTTCAGCGAAGGTGCGCCCCTGCGCGTGATCAAGTCCTACATCGCCACGCTGAAAATTGATGCAGTGGTGGTCGGCACCGTGCAGCCCAGGCATTGGGCCAAGGTGATCGGCGATACCACCGAGCGGCT > AE015451_phaM1/3728830‑3728965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |