| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 4,372,651 | Δ54,766 bp | PP_3849 CDS (putative calcium‑binding protein_ hemolysin‑type)–[PP_3920 CDS (putative Phage integrase)] | 78 genes PP_3849 CDS (putative calcium‑binding protein_ hemolysin‑type), PP_3850 CDS (conserved protein of unknown function), PP_5637 CDS (conserved protein of unknown function), PP_3851 CDS (conserved protein of unknown function), PP_3852 CDS (conserved protein of unknown function with BNR domain), PP_5638 CDS (conserved protein of unknown function), PP_3854 CDS (Lysozyme), PP_5639 CDS (conserved exported protein of unknown function), PP_3855 CDS (conserved protein of unknown function), PP_3856 CDS (conserved protein of unknown function), PP_3857 CDS (conserved protein of unknown function), PP_3858 CDS (putative Tail fiber protein), PP_3859 CDS (conserved protein of unknown function), PP_3860 CDS (Phage FluMu protein gp47), PP_3861 CDS (Phage FluMu protein gp46), PP_3862 CDS (putative Phage assembly protein), PP_3863 CDS (putative Phage tail protein), PP_3864 CDS (putative Phage FluMu DNA circulation protein), PP_3865 CDS (putative Phage tail protein), PP_5640 CDS (conserved protein of unknown function), PP_3866 CDS (conserved protein of unknown function), PP_3867 CDS (putative Phage tail tube protein), PP_3868 CDS (Group II intron‑encoding maturase), PP_3869 CDS (putative Phage sheath protein), PP_3870 CDS (Phage FluMu protein gp38), PP_3871 CDS (conserved protein of unknown function), PP_3873 CDS (conserved protein of unknown function), PP_3874 CDS (conserved protein of unknown function), PP_3875 CDS (conserved protein of unknown function), PP_3876 CDS (conserved protein of unknown function), PP_3877 CDS (conserved protein of unknown function), PP_3878 CDS (putative Phage minor capsid protein C), PP_3879 CDS (Phage portal protein_ HK97 family), PP_3880 CDS (conserved exported protein of unknown function), PP_3881 CDS (putative Phage terminase_ large subunit), PP_3882 CDS (putative Phage terminase_ small subunit), PP_3883 CDS (putative Phage holin), PP_3884 CDS (Phage holin_ lambda family), PP_5641 CDS (conserved protein of unknown function), PP_3886 CDS (conserved protein of unknown function), PP_3887 CDS (conserved protein of unknown function), PP_3888 CDS (conserved protein of unknown function), PP_3889 CDS (putative Phage integrase), PP_3890 CDS (conserved protein of unknown function), ybcO CDS (conserved protein of unknown function), PP_3892 CDS (conserved protein of unknown function), PP_3893 CDS (putative Phage DNA helicase), PP_3894 CDS (putative Phage replication protein O), PP_3895 CDS (putative Regulatory protein Cro), PP_3896 CDS (Transcriptional regulator_ Cro_CI family), PP_3897 CDS (conserved protein of unknown function), PP_3898 CDS (conserved protein of unknown function), PP_5643 CDS (conserved protein of unknown function), PP_5644 CDS (conserved membrane protein of unknown function), PP_3899 CDS (conserved protein of unknown function_ hicB family), PP_3900 CDS (hypothetical protein), PP_3901 CDS (conserved protein of unknown function), PP_3902 CDS (conserved protein of unknown function), PP_3903 CDS (conserved protein of unknown function), PP_3904 CDS (conserved protein of unknown function), PP_3905 CDS (Transcriptional regulator_ LuxR family), PP_3906 CDS (conserved protein of unknown function), PP_3907 CDS (conserved protein of unknown function), PP_3908 CDS (conserved protein of unknown function), PP_3909 CDS (conserved protein of unknown function), PP_3910 CDS (conserved protein of unknown function), PP_3911 CDS (conserved protein of unknown function), PP_3912 CDS (DNA‑cytosine methyltransferase), PP_3913 CDS (protein of unknown function), PP_5645 CDS (conserved protein of unknown function), PP_3914 CDS (conserved protein of unknown function), PP_5646 CDS (protein of unknown function), PP_3915 CDS (conserved protein of unknown function), PP_3916 CDS (conserved protein of unknown function), PP_5647 CDS (conserved protein of unknown function), PP_3917 CDS (conserved protein of unknown function), PP_3919 CDS (conserved protein of unknown function), [PP_3920 CDS (putative Phage integrase)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 4372651 | 4427416 | 54766 | 965 [0] | [0] 1033 | PP_3849 CDS (putative calcium‑binding protein_ hemolysin‑type)–[PP_3920 CDS (putative Phage integrase)] | PP_3849 CDS (putative calcium‑binding protein_ hemolysin‑type),PP_3850 CDS (conserved protein of unknown function),PP_5637 CDS (conserved protein of unknown function),PP_3851 CDS (conserved protein of unknown function),PP_3852 CDS (conserved protein of unknown function with BNR domain),PP_5638 CDS (conserved protein of unknown function),PP_3854 CDS (Lysozyme),PP_5639 CDS (conserved exported protein of unknown function),PP_3855 CDS (conserved protein of unknown function),PP_3856 CDS (conserved protein of unknown function),PP_3857 CDS (conserved protein of unknown function),PP_3858 CDS (putative Tail fiber protein),PP_3859 CDS (conserved protein of unknown function),PP_3860 CDS (Phage FluMu protein gp47),PP_3861 CDS (Phage FluMu protein gp46),PP_3862 CDS (putative Phage assembly protein),PP_3863 CDS (putative Phage tail protein),PP_3864 CDS (putative Phage FluMu DNA circulation protein),PP_3865 CDS (putative Phage tail protein),PP_5640 CDS (conserved protein of unknown function),PP_3866 CDS (conserved protein of unknown function),PP_3867 CDS (putative Phage tail tube protein),PP_3868 CDS (Group II intron‑encoding maturase),PP_3869 CDS (putative Phage sheath protein),PP_3870 CDS (Phage FluMu protein gp38),PP_3871 CDS (conserved protein of unknown function),PP_3873 CDS (conserved protein of unknown function),PP_3874 CDS (conserved protein of unknown function),PP_3875 CDS (conserved protein of unknown function),PP_3876 CDS (conserved protein of unknown function),PP_3877 CDS (conserved protein of unknown function),PP_3878 CDS (putative Phage minor capsid protein C),PP_3879 CDS (Phage portal protein_ HK97 family),PP_3880 CDS (conserved exported protein of unknown function),PP_3881 CDS (putative Phage terminase_ large subunit),PP_3882 CDS (putative Phage terminase_ small subunit),PP_3883 CDS (putative Phage holin),PP_3884 CDS (Phage holin_ lambda family),PP_5641 CDS (conserved protein of unknown function),PP_3886 CDS (conserved protein of unknown function),PP_3887 CDS (conserved protein of unknown function),PP_3888 CDS (conserved protein of unknown function),PP_3889 CDS (putative Phage integrase),PP_3890 CDS (conserved protein of unknown function),ybcO CDS (conserved protein of unknown function),PP_3892 CDS (conserved protein of unknown function),PP_3893 CDS (putative Phage DNA helicase),PP_3894 CDS (putative Phage replication protein O),PP_3895 CDS (putative Regulatory protein Cro),PP_3896 CDS (Transcriptional regulator_ Cro_CI family),PP_3897 CDS (conserved protein of unknown function),PP_3898 CDS (conserved protein of unknown function),PP_5643 CDS (conserved protein of unknown function),PP_5644 CDS (conserved membrane protein of unknown function),PP_3899 CDS (conserved protein of unknown function_ hicB family),PP_3900 CDS (hypothetical protein),PP_3901 CDS (conserved protein of unknown function),PP_3902 CDS (conserved protein of unknown function),PP_3903 CDS (conserved protein of unknown function),PP_3904 CDS (conserved protein of unknown function),PP_3905 CDS (Transcriptional regulator_ LuxR family),PP_3906 CDS (conserved protein of unknown function),PP_3907 CDS (conserved protein of unknown function),PP_3908 CDS (conserved protein of unknown function),PP_3909 CDS (conserved protein of unknown function),PP_3910 CDS (conserved protein of unknown function),PP_3911 CDS (conserved protein of unknown function),PP_3912 CDS (DNA‑cytosine methyltransferase),PP_3913 CDS (protein of unknown function),PP_5645 CDS (conserved protein of unknown function),PP_3914 CDS (conserved protein of unknown function),PP_5646 CDS (protein of unknown function),PP_3915 CDS (conserved protein of unknown function),PP_3916 CDS (conserved protein of unknown function),PP_5647 CDS (conserved protein of unknown function),PP_3917 CDS (conserved protein of unknown function),PP_3919 CDS (conserved protein of unknown function),[PP_3920 CDS (putative Phage integrase)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 4372650 | 0 (0.000) | 929 (1.050) | 131/264 | 0.1 | 100% | intergenic (‑1235/‑337) | PP_5636 CDS (protein of unknown function)/PP_3849 CDS (putative calcium‑binding protein_ hemolysin‑type) | –/– |
| ? | AE015451_phaM1 | 4427417 = | 0 (0.000) | intergenic (+1/+101) | PP_3920 CDS (putative Phage integrase)/PP_t61 tRNA (tRNA‑Cys) | –/– | |||||
Only 100 of 969 total aligned reads displayed.
CTAACAATTCCCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/4372512‑4372650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaTGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACG > AE015451_phaM1/4427417‑4427552 AACAATTCCCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGA < 1:8480404/137‑1 AATTCCCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGA > 1:3295594/1‑137 AATTCCCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGA > 1:7956141/1‑137 TTCCCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAG > 1:3074108/1‑137 TTCCCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATNTGACAGAAATCTGGCTTACTCATATACACTGATGAAG < 1:18802296/137‑1 CCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTT > 2:19240308/1‑137 TCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTG < 1:1541428/137‑1 TCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTG < 1:3866677/137‑1 TCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTG > 1:9993621/1‑137 TCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTG < 2:1143964/137‑1 CGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGG < 2:8722763/137‑1 GATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGG > 2:7238779/1‑137 ATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGA > 1:7532556/1‑137 TAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGAC < 2:18472149/137‑1 AGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACT < 2:11590334/137‑1 GTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTG > 2:17186633/1‑137 ATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCT > 1:17131647/1‑137 TCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTC < 1:17427519/137‑1 TCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTC < 2:199434/137‑1 GTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAG > 1:5667876/1‑137 TCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGT > 1:14528825/1‑137 TCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTAAATTAGT > 2:12973509/1‑137 catGGCGGGCTGGTCGTACAATATACGGCCAAGCCACGTACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGTCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTT < 2:10483511/134‑1 AGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGATTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTT < 1:882009/137‑1 GGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGA < 2:17603709/137‑1 GGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGA < 1:6962097/137‑1 GCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACT < 2:12707913/137‑1 GGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCG > 1:3507520/1‑137 TACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTT > 1:4559598/1‑137 ATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCC > 1:14877174/1‑137 TAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCT > 2:12278562/1‑137 CGGCCACGCCGCGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACGCATATACGCTGAGGAAGGTTTGGGAATGGTCTCAAGTAGTTTTGGGACTTCGGTGTTTTCCTGCGC > 2:774229/1‑137 CGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGC < 2:9584938/137‑1 GGCCAAGCCACGGACGATTTATCTGGCATCAAGACCATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGCTGAAGTTTTGGGACTGGTCTCACTTAGTTTTGGGACTTCGGTGTTTTCCTGCGCG > 2:5931604/1‑137 GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCG > 2:5319958/1‑137 GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCG > 2:9031564/1‑137 GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCG > 2:2699405/1‑137 GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCG > 2:7955418/1‑137 GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATAT‑‑ACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCA > 1:14275842/1‑137 GCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGC > 1:9391308/1‑137 GCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGC > 1:11438111/1‑137 GCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGC > 1:10989307/1‑137 CCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCA > 1:19129302/1‑137 CCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCA > 1:8273856/1‑137 CAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAGTCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTAGGACTTCGGTGTTTTCCTGCGCGCAA > 2:16461819/1‑137 AAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAA > 1:1801481/1‑137 AAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAA > 1:17592799/1‑137 AGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAG < 1:1000811/137‑1 AGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAG > 1:4216613/1‑137 CACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAA > 1:13212686/1‑137 GACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACC < 1:4696274/137‑1 ACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCC < 1:10643590/137‑1 ACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCC < 2:18102222/137‑1 CGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCC < 1:10217842/137‑1 CGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCC < 1:16544504/137‑1 CGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCC > 1:15176737/1‑137 GATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCG > 1:8954003/1‑137 GATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCG > 2:6218467/1‑137 GATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAAACCCG > 2:3667234/1‑137 ATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGC < 2:4165330/137‑1 ATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACC > 1:12311965/1‑137 ATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTAAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCACCC > 2:14398361/1‑137 TCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCT < 2:16032349/137‑1 CTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTC < 2:6620222/137‑1 CTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTC < 1:5178877/137‑1 CATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTCCTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATG > 1:13709305/1‑137 CATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATG > 2:4846333/1‑137 CAAGAACATCTTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCT < 1:18597455/137‑1 CAAGAACATCGTAGTGTCATTTGACANAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCT < 1:19275751/137‑1 CAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCT < 2:1468367/137‑1 CAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCT < 2:13793096/137‑1 CAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCT < 1:2733750/137‑1 CAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAAGTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCT < 2:11968343/137‑1 AAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTG > 2:16766795/1‑137 ACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGG > 1:243543/1‑137 CGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTT > 1:64142/1‑137 CGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTT > 2:15743218/1‑137 tTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTT < 1:16939834/136‑1 GTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTT < 2:9307548/137‑1 GTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTT < 1:5464806/137‑1 TAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTC < 2:6956974/137‑1 TGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAA > 2:15432072/1‑137 TGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAA > 1:13816808/1‑137 TCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATTGCTGCGGGGCTTTCGAATG < 2:5667876/137‑1 TCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATG < 1:2118975/137‑1 TTTGACAGAAATCTGGCTCACTCATATCCACTGCTAAAGTTCTGGGACTGGCCTCAATTAGTTCTGGGACCTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCCGCGGGGCTTTCGAATGGTG > 2:18872716/1‑137 GACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAG > 1:16018856/1‑137 GACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAG < 2:2904990/137‑1 GACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAG > 2:13598259/1‑137 GACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAG < 1:12731376/137‑1 GACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAG > 2:8160411/1‑137 AGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCC > 1:18376789/1‑137 AAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGA < 1:6135049/137‑1 AAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGA > 1:11764757/1‑137 TACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATC < 2:13185632/137‑1 TACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATC < 1:12182461/137‑1 CATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCACAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAAC < 2:4504300/137‑1 CACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGTTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGT > 2:10828836/1‑137 CACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGT > 2:3211401/1‑137 ACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTA > 1:15610012/1‑137 CTAACAATTCCCTCGATAGTAAATCTTTCGTCAGGGCGGGCTGGTCTTACAATAGACGGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/4372512‑4372650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaTGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACG > AE015451_phaM1/4427417‑4427552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |