| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 5699642 | 910 (1.000) | 56 (0.010) | 25/248 | 12.3 | 11.8% | intergenic (+388/‑3617) | PP_5002 CDS (conserved protein of unknown function)/PP_5009 CDS (conserved protein of unknown function) | –/– |
| ? | pS4413_qbsFH | 12 = | 0 (0.000) | intergenic (–/‑1941) | –/aadA CDS | –/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1087 total aligned reads displayed.
TCGTCTCAGGACAACGGAGCGTCGTAGATGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/5699496‑5699642‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaattaattgTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > pS4413_qbsFH/12‑147 CGTCTCAGGACAACGGAGCGTCGTAGATGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAATGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTT < 2:9621212/137‑1 AGGACAACGGAGCGTCGTAGATGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAA > 1:16565151/1‑137 AGGACAACGGAGCGTCGTAGATGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAA > 1:10003423/1‑137 agtTGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAATTGTCGACAATTAATCAT < 2:8599414/134‑1 tcgagtGCGGCTGATTTGTCCTACTCGTGAGAGCGTTCACCGACAAACAACAAATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCGTTCGTTTTATTTGATGCCTTTAATTAATTGTTGACAATTAATCATCGGCA < 2:4500278/131‑1 tcgAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAATTGTTGACAATTAATCATCGGCA < 1:12420743/134‑1 cgaATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTTTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCG < 1:1571876/134‑1 catGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACG < 2:10149395/134‑1 ccgGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTGACGGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAAT < 1:9355259/134‑1 gatCCTTTCGTTTTATTTGATGCCTTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACC < 2:18554752/134‑1 tctTTTTATTGGATGCCTTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGA < 2:10483308/134‑1 attCCTTTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTG < 1:11021359/134‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTATGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 2:9401370/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 1:2784033/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG > 1:2996411/1‑137 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 1:7405673/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 1:19356513/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 1:18723178/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 1:16063505/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 2:11517811/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 2:12815308/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 2:2028078/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 2:2657166/137‑1 TTAATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 1:10491159/137‑1 TTAATGAATTGTCGACAATGAATCATCGGCATAGTATATCTGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTG < 1:9814332/137‑1 AATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCC > 2:7771008/1‑137 AATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCC < 1:15487626/137‑1 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGCCAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 2:14318774/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 2:18414359/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 1:6483840/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 1:6253655/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 2:17278069/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 2:13158651/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 2:12244577/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 1:14269608/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 1:13077776/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 1:12795031/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 1:3451149/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 2:3945594/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 1:18286773/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGAAGGAAAACCACATGTGCCCTTGCCC > 1:6750454/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAAGAGGAAAAACATATGTGCCCTTGCCC > 1:19144635/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCATAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCC > 2:6784062/1‑137 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAA > 2:17487419/1‑66 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAA < 1:17487419/66‑1 ATTAATTGTTGACAATTAATCATCGGCATAGTATATCGACATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGGATTCGAGCTCGATACCAGGAGGGAAAACATATGTGCCCTTGCCC > 2:17794643/1‑137 gTAATTGTTGACAATTAATCATCGGCATAGTAGATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCC < 1:4711327/136‑1 TTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCC < 2:15146140/137‑1 TTAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCACGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCC > 1:16943440/1‑137 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGATGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 2:1409719/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:15103337/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:9043224/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 2:3093397/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:3798230/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:835683/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 2:12556025/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:13718247/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:804085/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 2:18945096/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 2:13764679/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 2:6128030/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:172346/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:7125644/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAAGTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 1:11519521/137‑1 TAATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTACAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCT < 2:3572114/137‑1 ATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTAC < 1:7582456/137‑1 ATTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTAC > 2:2385145/1‑137 ATTGTTGACAATTAATCAGCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATGCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTAC < 1:4142005/137‑1 TTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACA > 1:4483086/1‑137 TGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACAT < 2:16953397/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATGGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:15951598/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATATTATAATACGACAAGATGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAACTCGATACCATGAGGAAAAACCCATTTGCCCTTTCCCCcccctc < 2:708129/137‑7 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:5333911/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 1:10231551/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:9084668/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:11652096/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 2:8067921/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 1:11874823/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:4831618/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:2049767/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 2:5735274/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:6338880/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:2479523/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 2:7367725/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:17785731/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 1:13246325/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:18067696/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:4851124/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:5228957/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 2:16692274/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 2:15668894/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:15453468/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 2:14585405/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:13621160/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 1:8710118/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG < 2:11195975/137‑1 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:108068/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:14733299/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGACCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 1:5698884/1‑137 GTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAAATAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGATACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > 2:16416494/1‑137 TCGTCTCAGGACAACGGAGCGTCGTAGATGTCTAGGGCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTTTAATTAATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/5699496‑5699642‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaattaattgTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCCTAGGCCGCGGCCGCGCGAATTCGAGCTCGGTACCAGGAGGAAAAACATATGTGCCCTTGCCCCTACATG > pS4413_qbsFH/12‑147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |