| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 5,674,753 | G→C | intergenic (+115/+25) | rhlE‑II CDS (ATP‑dependent RNA helicase) → / ← yceI CDS (polyisoprene‑binding protein_ acidic stress response factor) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 5,674,753 | 0 | G | C | 99.8% | 3644.7 / NA | 909 | intergenic (+115/+25) | rhlE‑II CDS (ATP‑dependent RNA helicase)/yceI CDS (polyisoprene‑binding protein_ acidic stress response factor) | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base C (568/336); minor base T (0/2); total (570/339) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 910 total aligned reads displayed.
CTGACCCGCAAGGGCTGATAGAAGTACCGA‑GGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GCGC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGT > AE015451_phaM1/5674621‑5674879 | cAAGGGCTGATAGAAGTACCGA‑GGGGGCTGCTTCGCAGCCCTATCGCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATATGGCCGCAAAGCGGCCC‑ACTCGGtttt > 2:15365122/1‑137 (MQ=38) cAAGGGCTGATAGAAGTACCGA‑GGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGtttt > 2:16969923/1‑137 (MQ=255) aGAAGTACCGA‑GGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGa > 1:12554622/1‑137 (MQ=255) tACCGA‑GGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTa < 1:11529676/137‑1 (MQ=255) aCCGAGGGGGGCTGCTTCGCAGCCCGATCACGACACAAGGCCGCTCCTGCAGATAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTa < 1:12755229/137‑1 (MQ=38) ccGA‑GGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACt > 1:18154622/1‑137 (MQ=255) gggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTg > 1:7632209/1‑137 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 1:15304850/137‑1 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 1:2427644/137‑1 (MQ=255) gggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt < 2:3153320/137‑1 (MQ=255) gggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt > 2:8333689/1‑137 (MQ=255) gggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt > 1:15785898/1‑137 (MQ=255) ggCTGCTTCGCAGCCCTATCACGACACAAGGCTGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt < 1:8921589/137‑1 (MQ=255) ggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAACTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt < 2:13252351/137‑1 (MQ=255) ggCTGCGTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAACTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt < 1:654494/137‑1 (MQ=37) gctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTc > 1:5639764/1‑137 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCacac < 2:9656816/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:14472229/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 2:1272944/137‑1 (MQ=255) cGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 1:3119455/137‑1 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGaca > 2:15885771/1‑137 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGaca > 1:18403176/1‑137 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 2:14511270/137‑1 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 1:4355144/137‑1 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 1:17196026/137‑1 (MQ=255) tCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 1:12015756/137‑1 (MQ=255) cACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGata < 2:7010084/137‑1 (MQ=255) aaGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtc > 1:5117661/1‑137 (MQ=255) atgCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACAATGATAtccaggtcc < 1:17797219/135‑1 (MQ=38) aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcc < 2:7798523/137‑1 (MQ=255) ccGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtccagg > 2:5151867/1‑137 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 1:984011/137‑1 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 2:7424408/137‑1 (MQ=255) tCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGGGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCt < 1:4703420/137‑1 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACCCTGATATCCAGGTCCAGGGTCTGc > 1:9626920/1‑137 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat > 2:715475/1‑118 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 2:1192776/1‑137 (MQ=255) gCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGa < 2:3346174/137‑1 (MQ=255) agaATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc > 1:4998241/1‑92 (MQ=37) ttCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGTAcc > 1:925733/1‑137 (MQ=255) ttCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAcc > 2:13075272/1‑137 (MQ=255) ttCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAcc > 1:7804593/1‑137 (MQ=255) cTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCg > 1:8270306/1‑137 (MQ=255) aTCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGcc < 1:7130100/137‑1 (MQ=255) aGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGc < 2:10286178/137‑1 (MQ=255) ggAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGcc < 2:16361611/137‑1 (MQ=255) ggAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGcc < 1:2101458/137‑1 (MQ=255) cGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAg > 2:11170739/1‑137 (MQ=255) cGGCCTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAg > 2:13787461/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACCCTGATATCCAGGTCCAAGATCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:5973473/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 2:13523024/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 2:1409199/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 2:18200574/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:6766919/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 2:18455791/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:3817180/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:1481042/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:1352637/1‑137 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCg > 1:13084754/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGata < 1:10863437/84‑1 (MQ=39) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGa > 2:1896024/1‑104 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:49331/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:5452257/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:5929045/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:6331796/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:6712584/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:9144867/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:10169287/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:4088046/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:17564649/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:17055952/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:19222084/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:16598669/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt < 1:13980949/137‑1 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:636765/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 1:10629473/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:10770150/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGGCCC‑CATCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:1765155/1‑137 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGC‑GGCCTCATCGGTTTTAAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGATCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:4556193/1‑137 (MQ=255) tgtCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcag < 2:1997955/137‑1 (MQ=255) tgtCGTGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcag < 1:14259664/137‑1 (MQ=255) tGATAGGGCCGCAAAGCGGCCC‑CCTCTGGTTTCAGCCGGCAGAAACTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttca < 2:11390562/137‑1 (MQ=255) tGATAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttca < 2:2375954/137‑1 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTCCTTCTGCTTCACACCTTCGACCCTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 2:8769243/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:13749970/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 2:3995192/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:16177628/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:10348491/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:10007634/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:18922995/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:3525528/1‑137 (MQ=255) tAGGGCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 1:7352807/1‑137 (MQ=255) ggCCGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtgg < 1:2787740/137‑1 (MQ=255) ccGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 2:12190764/137‑1 (MQ=255) ccGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAACACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 1:16387408/137‑1 (MQ=255) ccGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCAAGGGTATGCGCAGTAGCACCAGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg > 2:11661686/1‑137 (MQ=255) cGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtgg > 1:8607828/1‑137 (MQ=255) cGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtgg > 2:16222712/1‑137 (MQ=255) cGCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtgg > 2:1471831/1‑137 (MQ=255) gCAAAGCGGCCC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTc < 2:2855991/81‑1 (MQ=255) | CTGACCCGCAAGGGCTGATAGAAGTACCGA‑GGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GCGC‑CCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGT > AE015451_phaM1/5674621‑5674879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |