| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 499,203 | A→G | intergenic (+47/‑249) | uhpA CDS (DNA‑binding response regulator UhpA) → / → PP_0411 CDS (Polyamine ABC transporter_ ATP‑binding protein) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 499,203 | 0 | A | G | 99.7% | 1212.3 / ‑5.4 | 305 | intergenic (+47/‑249) | uhpA CDS (DNA‑binding response regulator UhpA)/PP_0411 CDS (Polyamine ABC transporter_ ATP‑binding protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (72/232); minor base T (0/1); total (72/233) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
CCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCAGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATG‑CCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGG > AE015451_phaM1/499072‑499330 | ccACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCAt < 1:3601750/137‑1 (MQ=255)ccACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCAt < 1:18362744/137‑1 (MQ=255)ccACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCAt < 1:14459495/137‑1 (MQ=255) cacaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATg < 2:15454900/137‑1 (MQ=255) cacaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATg < 2:16399785/137‑1 (MQ=255) acaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGc > 2:17309368/1‑137 (MQ=255) caATGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCCGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGGAGCGGGCATGc < 2:14837556/137‑1 (MQ=255) aaGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCTAAGCCTATGT‑GGGAGCGGGCATGccc < 2:3167296/137‑1 (MQ=255) aGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATGtcct > 1:3189925/1‑136 (MQ=255) aGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGACGccca > 2:3996104/1‑136 (MQ=255) gtcACGCCTGATGCGGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCGGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 1:17145316/135‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGTGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 1:6314005/137‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 1:13495633/137‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 2:12008983/137‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 1:4823461/137‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 2:16112477/137‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 1:14488219/137‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 2:8061452/137‑1 (MQ=255) ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 2:10173277/137‑1 (MQ=255) gccACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCcgc < 2:4615090/135‑1 (MQ=255) gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑g < 1:14852795/137‑1 (MQ=255) gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑g < 2:14616630/137‑1 (MQ=255) gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑g < 2:12069265/137‑1 (MQ=255) gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑g < 2:1165002/137‑1 (MQ=255) gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGAGTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATTT‑GGGAGCGGGCATGCCCGCGAAC‑g < 1:13228242/137‑1 (MQ=255) cTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATGACCGCaaaaagg > 2:6319624/1‑133 (MQ=255) tGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATGACCACGCAcaagg > 2:11343016/1‑133 (MQ=255) tGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGAGGTCCGCGGAC‑g‑gga > 1:17843609/1‑136 (MQ=255) aTGCATAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑ggcct < 1:3246536/137‑1 (MQ=255) aTGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑ggcct < 1:13597096/137‑1 (MQ=255) aTGCAGAAGTCGAAATTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGACTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑ggcct < 2:5128198/137‑1 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGTTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑ggcctggc < 2:4540001/137‑1 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATTGCCGAGAAC‑A‑ggactggg > 1:7511982/1‑136 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATGCCCGCGAAC‑A‑ggactggg > 2:7206717/1‑136 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGAGGGCCGCGAAA‑g‑gggcgtga > 1:10021581/1‑131 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGACGCCCGCGAAC‑A‑agactggc > 2:5625500/1‑137 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑ggcctggg > 2:1849541/1‑136 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑ggcctggc < 2:3499484/137‑1 (MQ=255) cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑A‑ggcccggc > 2:16907907/1‑137 (MQ=255) cAGAAGTTGAAAGTGAACCCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCGTGCCCGCGAAC‑G‑ggcctggc < 1:10073606/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTTAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTTCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:9533167/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGTCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 1:1040712/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 1:16277501/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:15116677/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 1:2170961/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:15680986/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:1399964/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 1:19370572/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:13388213/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:18006166/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:1808895/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:9267981/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 1:13712970/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:429882/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:10614223/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:4418074/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 1:10887930/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 1:9394206/137‑1 (MQ=255) aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCAAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:18814143/137‑1 (MQ=255) aaGGTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGTTGATCTGATTGCGGCATACGGGTGCCTGAAACTTGTCGAAGCCTATGT‑GGGAGCTGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:12279911/137‑1 (MQ=255) aGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgc < 2:16252445/137‑1 (MQ=255) aGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgc < 2:17725782/137‑1 (MQ=255) gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgct < 2:10274523/137‑1 (MQ=255) gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgct < 1:8944230/137‑1 (MQ=255) gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgct < 1:18152337/137‑1 (MQ=255) gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgct < 2:8505483/137‑1 (MQ=255) gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgct < 1:16016816/137‑1 (MQ=255) gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgct < 2:18305900/137‑1 (MQ=255) gTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCctgct < 1:715398/137‑1 (MQ=255) tGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCACGCCCACGAAC‑A‑GGACTTGCccgctgg > 2:13618762/1‑136 (MQ=255) gAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGAt < 1:18689894/137‑1 (MQ=255) aaaGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGAtc < 1:157445/137‑1 (MQ=255) aGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATGACCGCAAAA‑A‑GGACTTGGCTGCTGAtccc > 1:2511405/1‑135 (MQ=255) tGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTa < 1:115944/137‑1 (MQ=255) ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGcc < 1:5800125/137‑1 (MQ=255) ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGcc < 1:394429/137‑1 (MQ=255) ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGcc < 2:4883799/137‑1 (MQ=255) ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGcc < 2:13857390/137‑1 (MQ=255) ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACNTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGcc < 1:16811582/137‑1 (MQ=255) ggCGGAGCTGATGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGcc < 2:2736472/137‑1 (MQ=255) cGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATATGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCgg < 1:9948480/137‑1 (MQ=255) cGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCgg < 2:1899295/137‑1 (MQ=255) cGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGAACGCCCCCGAAC‑G‑GGTCTGGCCTCTTGGTCTCCCTGGCTGAggcag > 2:9745374/1‑133 (MQ=255) cTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCctct < 1:10821003/137‑1 (MQ=255) cTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCctct < 1:3534044/137‑1 (MQ=255) cTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCctct < 1:8747258/137‑1 (MQ=255) gTACACCAGGGAGCAAAAGGGGATCTGATTGCGACAGACGGGTGCCCGAAACTTACCGAAGCTTATGT‑GGGAGTGGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGc < 1:12581013/137‑1 (MQ=255) tGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATGGCCGGAAAA‑A‑GGACTTGCCTTTTTGCCTCTCTTGCTGAGCCTGCCCCCTCTCGGGGATG‑cccac > 1:9747823/1‑135 (MQ=255) tGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGAGGCCCCCAAACAG‑GAACGGGCCT‑CTGGTCTCTCTGGGTGAGCCAGACCCCTCTCGGGAAGG‑cccca > 1:12004855/1‑135 (MQ=255) aGCACAAGCTGATCTGATTGCGACATACAGGTGCCCGAAACTTGCCGAAACCTATGT‑GGGAGCGGGGACACCAGCCAAC‑G‑GAACCCGCCTGCTCATCTCTCTGGCTTAGCCAGCCTCTTCGCGAGCATT‑CCCGCTcc > 2:5435648/1‑137 (MQ=255) aaGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg < 2:988195/86‑1 (MQ=255) aaGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg > 1:988195/1‑86 (MQ=255) ctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGAATACCCACGAAC‑A‑GGCACGGCCTGCCGATCTCTATGGCTGAGCCGGCCCCCTCTCGAGCATG‑CCCCCCCCCACACGTTTcttt > 2:3743839/1‑134 (MQ=255) ggACGTACGGGTGCCCGAAGCTTGCTGAAGCTTGTGT‑GGGAGAGGGCGTGCCGGCGAGT‑G‑GCCCTGTCTTGTTGTTCTCTGTGGTTGGTCTGTCTTTTTTGTGGGCGTG‑CCCGCTCCCACAGGTTTCGTGGTTGGCt < 2:8772664/136‑1 (MQ=255) gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCACGCCCACGAAA‑A‑GGACCGGCCTGCTGATCTCTCTGGTTTAGCCGGCCCCTTCTCGGGGATGTCCCCCCCCCACA‑GTTTCGTTGTTTGCTc > 2:6156032/1‑137 (MQ=255) tatgggTGCCCAAAACTTACCGAAGCTGATGT‑GGGAGCGGGCAGTCCTGAAAAT‑G‑GGCTTGTCCGGCTGCTTTCGGTGGCGGAGCTGGCCTCTTCGCGGGCATC‑CCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa < 2:2126557/134‑1 (MQ=255) ggTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCACGAAC‑GAGGCCGGCCCTGTTGGT‑TTTCCGGATGAGCCGGCCTCTTCTCGGGCACG‑CCCCCTCCCACAGGGTTCGTTGTTTGTTCGCCAgggg > 2:10989258/1‑136 (MQ=255) gAAACTTGCCGAAGCCTATGT‑GGGAGCGGGGATGCCCGCGAAC‑G‑GGCATTGACCGCTTATCTCTCTGGGTGCGCCGGGCTCTTTGTGGGTAGG‑CCCGCTTCCCCGGGTTTTTTGGGTGGGTCGCAAGGGGATTTCaa > 2:12893626/1‑137 (MQ=255) gAAACTTGCCGAAGCCTATGT‑GGGAGCGGGCATGCCCGCGAAC‑G‑Ggcctggcctg > 2:10877903/1‑55 (MQ=255) ttGCAGAAGCCTATGT‑GGGAGTGGACGGTCCCGGGAGT‑G‑GTCTTGGTCGGCGGATCTCTGTGGCGGGGCCGTCTTTTTTTGGGGCATC‑CCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCg < 2:11933797/137‑1 (MQ=255) | CCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGT‑GGGAGCAGGCATGCCCGCGAAC‑G‑GGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATG‑CCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGG > AE015451_phaM1/499072‑499330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |