| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_012967 | 3,744,925 | Δ15 bp | coding (489‑503/1125 nt) | waaG ← | glycosyltransferase family 4 protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_012967 | 3744925 | 3744939 | 15 | 50 [0] | [0] 50 | waaG | glycosyltransferase family 4 protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3744924 | 0 (0.000) | 49 (0.890) | 34/162 | 0.5 | 100% | coding (504/1125 nt) | waaG | glycosyltransferase family 4 protein |
| ? | NC_012967 | 3744940 = | 0 (0.000) | coding (488/1125 nt) | waaG | glycosyltransferase family 4 protein | |||||
TGTTCGGTTATTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3744844‑3744924‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTGTGTCG > NC_012967/3744940‑3745018 TGTTCGGTTATTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCT < 1:79275/82‑1 GGTTATTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAA < 1:637444/82‑1 GGTTATTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAA < 1:577424/82‑1 GTTATTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAAC > 1:1324344/1‑82 TATTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGC > 1:1963705/1‑82 TTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTC < 1:50932/82‑1 TCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCC < 1:1652930/82‑1 CATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGC > 1:71731/1‑82 CATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGC > 1:71732/1‑82 TCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGT < 1:2558687/82‑1 TCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGT < 1:3037334/82‑1 TCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGT > 1:3734585/1‑82 TTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCT < 1:4254708/82‑1 ACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGA < 1:4246048/82‑1 GGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAA < 1:2055153/82‑1 GGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAA < 1:3844186/82‑1 TAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGC < 1:308130/82‑1 TAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGC < 1:4378586/82‑1 GCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGA < 1:2655909/82‑1 GCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGA < 1:3499261/82‑1 GCTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGA < 1:492354/82‑1 CTGGCTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGAT < 1:2488801/82‑1 TGGCTGCTGGCTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATT > 1:2894794/1‑82 GCTGCTGGGTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTG > 1:2352852/1‑82 CTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGC > 1:333860/1‑82 CTGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGC > 1:1598693/1‑82 TGCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCT < 1:1574810/82‑1 GCTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTT > 1:4252194/1‑82 CTGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTA < 1:2155988/82‑1 TGGTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTAT < 1:3043539/82‑1 GTTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCT > 1:1375313/1‑82 TTATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTG < 1:2334092/82‑1 TATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGT < 1:1099532/82‑1 TATATTTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGT < 1:4049990/82‑1 TTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAacc > 1:3551304/1‑79 TTACGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCA > 1:3189134/1‑82 CGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCA > 1:3647401/1‑82 CGATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCA < 1:2074115/82‑1 GATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAG > 1:159212/1‑82 ATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGC < 1:933618/82‑1 ATCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGC < 1:2683247/82‑1 TCAGGATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCA < 1:4346419/82‑1 GATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTG < 1:4258358/82‑1 GATAAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTG < 1:1250127/82‑1 AAATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTGTGT > 1:3882921/1‑82 ATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTGTGTCG < 1:3339120/82‑1 ATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTGTGTCG < 1:270638/82‑1 ATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTGTGTCG < 1:1416880/82‑1 ATCTGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTGTGTCG < 1:1366394/82‑1 TGTTCGGTTATTCCATTCTTCTTACGGAAGATTTCACGGCTATTAGCTGGCTGCTGGTTATATTTACGATCAGGATAAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3744844‑3744924‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCAGCAGCTGTGTCG > NC_012967/3744940‑3745018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |