| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_012967 | 3,745,004 | (TCAGCA)2→1 | coding (419‑424/1125 nt) | waaG ← | glycosyltransferase family 4 protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_012967 | 3745004 | 3745009 | 6 | 44 [0] | [0] 46 | waaG | glycosyltransferase family 4 protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3745003 | 0 (0.000) | 43 (0.860) | 37/150 | 0.3 | 100% | coding (425/1125 nt) | waaG | glycosyltransferase family 4 protein |
| ? | NC_012967 | 3745010 = | 0 (0.000) | coding (418/1125 nt) | waaG | glycosyltransferase family 4 protein | |||||
CCCGGTGGCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3744925‑3745003‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcaGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGA > NC_012967/3745010‑3745087 CCCGGTGGCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCT > 1:3607717/1‑82CCCGGTGGCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCT > 1:2644536/1‑82 CGGTGGCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGT > 1:702577/1‑82 GGCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCG < 1:995088/82‑1 GGCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCG > 1:1779986/1‑82 GCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGG > 1:81803/1‑82 CAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGC > 1:945537/1‑82 AGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCT > 1:2293448/1‑82 ATGAAACCGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCC < 1:2002634/82‑1 tAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTT < 1:1195572/81‑1 AAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTT > 1:60186/1‑82 AACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTC > 1:4418775/1‑82 ACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCG > 1:1774844/1‑82 GCTCCGCTTCAGTCTGATAATGTTTCGGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA < 1:3937380/82‑1 CGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGGA‑GGTT > 1:3790528/1‑82 CGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTT < 1:2931223/82‑1 CGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTT > 1:4249929/1‑82 CAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCG > 1:3074009/1‑82 CAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGGTCGAA‑AGTTGCCCG > 1:1642821/1‑82 AGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAAGGGTTGCCgc > 1:476444/1‑80 AGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGC < 1:1639723/82‑1 AGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGC > 1:956954/1‑82 TGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAA > 1:4002639/1‑82 ATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAG < 1:2379341/82‑1 AATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGC < 1:1880940/82‑1 ATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑AGTTGCCCGCTCCAAGGCG > 1:592444/1‑82 TGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCATCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGG > 1:2415713/1‑82 TTCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCAT < 1:2243854/82‑1 TCTGGAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATA < 1:1559254/82‑1 tAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGG < 1:303952/81‑1 GAAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGG > 1:2223869/1‑82 AAATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGC < 1:3909106/82‑1 AAAGCGGCGATTTGTTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGC < 1:3909124/82‑1 ATCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGA > 1:2201989/1‑82 TCGGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTTCCCTGTTCGAA‑GGTTGCCCGCTCAAAAGCGGCATAATGGCGAT > 1:575134/1‑82 GGCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAA > 1:3238498/1‑82 GCGATTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAAC < 1:628026/82‑1 TTTGCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGA > 1:1567905/1‑82 TTTGCGTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGA < 1:1256340/82‑1 GCTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGT < 1:1632657/82‑1 CTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTC < 1:1915858/82‑1 CTTATCTGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTC < 1:1631017/82‑1 TGTCAGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGA < 1:1389857/82‑1 AGCAGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGA > 1:738279/1‑82 CCCGGTGGCAGAATATGAAAACGCTCCGCTTCAGTCTGATAATGTTTCTGGAAATCGGCGATTTGCTTATCTGTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3744925‑3745003‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcaGCTGTGTCGGCTTGCCCTGTTCGAA‑GGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGA > NC_012967/3745010‑3745087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |