Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_012967 70,867 T→C D92G (GAC→GGC)  araA ← L‑arabinose isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_01296770,8670TC100.0% 397.5 / NA 95D92G (GAC→GGC) araAL‑arabinose isomerase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (48/47);  total (48/47)

ATATCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGTCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTAATTCGCG  >  NC_012967/70789‑70944
                                                                              |                                                                             
atatCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGt                                                                            >  1:3153672/1‑82 (MQ=255)
atatCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGt                                                                            >  1:3153673/1‑82 (MQ=255)
atatCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGt                                                                            >  1:2074537/1‑82 (MQ=255)
 tatCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGtt                                                                           >  1:1914465/1‑82 (MQ=255)
  attgATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGtta                                                                          >  1:3262503/4‑81 (MQ=255)
  atCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTg                                                                          <  1:759750/82‑1 (MQ=255)
   tCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGa                                                                         >  1:2359464/1‑82 (MQ=255)
    cGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGAt                                                                        >  1:1303089/1‑82 (MQ=255)
    cGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGAt                                                                        <  1:2301815/82‑1 (MQ=255)
    cGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGAt                                                                        >  1:1731937/1‑82 (MQ=255)
     gATACTGTCCCACGGCAGCGCCGCGTTGACCTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATc                                                                       <  1:496195/82‑1 (MQ=255)
     gATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATc                                                                       >  1:502146/1‑82 (MQ=255)
      aTACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATcc                                                                      >  1:504237/1‑82 (MQ=255)
      aTACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATcc                                                                      <  1:2612575/82‑1 (MQ=255)
      aTACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATcc                                                                      <  1:2612578/82‑1 (MQ=255)
       tACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCca                                                                     <  1:4262420/82‑1 (MQ=255)
       tACTGTCCCACGGCAGCGCCGCGGTGAACTGGGTGTGGAATTGCAGCAACGGTTTGGTGAGCAAGGTCAGGCCGTTGATCca                                                                     >  1:659983/1‑82 (MQ=255)
        aCTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCcac                                                                    >  1:3461512/1‑82 (MQ=255)
        aCTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCcac                                                                    >  1:1476734/1‑82 (MQ=255)
         cTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCcaca                                                                   >  1:2635078/1‑82 (MQ=255)
         cTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCcaca                                                                   >  1:2282306/1‑82 (MQ=255)
         cTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCcaca                                                                   >  1:4128437/1‑82 (MQ=255)
         cTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCcaca                                                                   >  1:1221901/1‑82 (MQ=255)
            tCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCCCAttt                                                                >  1:2736902/1‑82 (MQ=255)
            tCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACAttt                                                                <  1:431733/82‑1 (MQ=255)
            tCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACAttt                                                                <  1:3366910/82‑1 (MQ=255)
             cccACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACAtttt                                                               <  1:2089029/82‑1 (MQ=255)
             cccACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCAGTTGATCCACAtttt                                                               >  1:835434/1‑82 (MQ=255)
              ccACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTg                                                              <  1:571415/82‑1 (MQ=255)
              ccACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTg                                                              >  1:3911912/1‑82 (MQ=255)
              ccACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTg                                                              <  1:168032/82‑1 (MQ=255)
              ccACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTg                                                              <  1:2503743/82‑1 (MQ=255)
              ccACGGCAGAGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTAAGGACGTTGATCCACATTTTg                                                              >  1:3911913/1‑82 (MQ=255)
               cACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTgg                                                             >  1:774286/1‑82 (MQ=255)
                aCGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGc                                                            <  1:2007838/82‑1 (MQ=255)
                aCGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGc                                                            <  1:3209080/82‑1 (MQ=255)
                 cGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGcc                                                           <  1:3645672/82‑1 (MQ=255)
                   gCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCgg                                                         <  1:2865901/82‑1 (MQ=255)
                   gCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCgg                                                         >  1:3132906/1‑82 (MQ=255)
                    cAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCggg                                                        <  1:3929175/82‑1 (MQ=255)
                    cAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCggg                                                        <  1:2290095/82‑1 (MQ=255)
                    cAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCggg                                                        >  1:2447172/1‑82 (MQ=255)
                       ctccgcGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGgag                                                     <  1:3824968/80‑1 (MQ=255)
                       cgccgcGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGgag                                                     <  1:2897296/82‑1 (MQ=255)
                       cgccgcGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGgag                                                     >  1:288783/1‑82 (MQ=255)
                        gccgcGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGgaga                                                    >  1:2698332/1‑82 (MQ=255)
                         ccgcGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGaa                                                   >  1:2836658/1‑82 (MQ=255)
                          cgcgTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAg                                                  >  1:2180107/1‑82 (MQ=255)
                           gcgTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAgg                                                 <  1:52257/82‑1 (MQ=255)
                            cgTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGgt                                                <  1:473454/82‑1 (MQ=255)
                              ttGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGgtgt                                              >  1:3137877/1‑82 (MQ=255)
                                gAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGc                                            <  1:3359648/82‑1 (MQ=255)
                                gAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGc                                            >  1:3789784/1‑82 (MQ=255)
                                gAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGc                                            >  1:3744408/1‑82 (MQ=255)
                                gAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGc                                            >  1:948756/1‑82 (MQ=255)
                                gAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGc                                            <  1:2017964/82‑1 (MQ=255)
                                    tGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGcc                                        >  1:749154/1‑82 (MQ=255)
                                         gtgGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCAcacc                                   <  1:1360732/82‑1 (MQ=255)
                                          tgGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCAcacca                                  >  1:2292031/1‑82 (MQ=255)
                                          tgGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCAcacca                                  <  1:2888519/82‑1 (MQ=255)
                                           ggAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCAcaccac                                 >  1:1387610/1‑82 (MQ=255)
                                            gAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCCGCCACaccacc                                >  1:3592860/1‑82 (MQ=255)
                                             aaTTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACAccacca                               <  1:3324989/82‑1 (MQ=255)
                                              aTTGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGAAGCCACACCaccag                              >  1:1272047/1‑82 (MQ=255)
                                                tGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCactagac                            <  1:398843/82‑1 (MQ=255)
                                                tGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCaccagac                            >  1:4177340/1‑82 (MQ=255)
                                                tGCAGCAACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCaccagac                            <  1:768046/82‑1 (MQ=255)
                                                  cagcaACGGGTTGTTGAGCATGGGCAGGCCGGTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCaccggacca                          >  1:4097274/1‑82 (MQ=255)
                                                   ggcaACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCaccagaccag                         >  1:2189545/2‑82 (MQ=255)
                                                   agcaACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCaccagaccag                         <  1:4301116/82‑1 (MQ=255)
                                                    gcaACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAgc                        <  1:3226093/82‑1 (MQ=255)
                                                    gcaACGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAgc                        >  1:4159858/1‑82 (MQ=255)
                                                      aaCGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAgcgc                      <  1:2620965/82‑1 (MQ=255)
                                                      aaCGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAgcgc                      <  1:54378/82‑1 (MQ=255)
                                                       tcGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCa                     <  1:3677615/81‑1 (MQ=255)
                                                       aCGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCa                     >  1:2459640/1‑82 (MQ=255)
                                                       aCGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCa                     <  1:3024459/82‑1 (MQ=255)
                                                        cGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCaa                    >  1:2998023/1‑82 (MQ=255)
                                                        cGGTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCaa                    >  1:585268/1‑82 (MQ=255)
                                                         ggTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAAc                   <  1:1825717/82‑1 (MQ=255)
                                                         ggTTTGTTGAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAAc                   <  1:717409/82‑1 (MQ=255)
                                                            ttgttgAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAt                <  1:3692909/82‑1 (MQ=255)
                                                            ttgttgAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAt                >  1:361837/1‑82 (MQ=255)
                                                            ttgttgAGCATGGTCAGGCCGTTGATCCACATTTGGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAt                <  1:559362/82‑1 (MQ=255)
                                                             tgttgAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAtc               <  1:952460/82‑1 (MQ=255)
                                                              gttgAGCATGGTCAGTCCTTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAtcg              <  1:933711/82‑1 (MQ=255)
                                                              gttgAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAtcg              <  1:2259870/82‑1 (MQ=255)
                                                              gttgAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAtcg              >  1:3954705/1‑82 (MQ=255)
                                                                tgAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAtcgtc            <  1:283030/82‑1 (MQ=255)
                                                                tgAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAtcgtc            >  1:1423414/1‑82 (MQ=255)
                                                                 gAGCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGAtcgtcg           >  1:3114783/1‑82 (MQ=255)
                                                                   gCATGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTa         <  1:3892423/82‑1 (MQ=255)
                                                                      tGGTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTAAtt      <  1:2227577/82‑1 (MQ=255)
                                                                       ggTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTAATtc     <  1:558971/82‑1 (MQ=255)
                                                                       ggTCAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTAATtc     >  1:2820389/1‑82 (MQ=255)
                                                                          cAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTAATtcgcg  <  1:3294639/82‑1 (MQ=255)
                                                                          cAGGCCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTAATtcgcg  >  1:2022883/1‑82 (MQ=255)
                                                                              |                                                                             
ATATCGATACTGTCCCACGGCAGCGCCGCGTTGAACTGGGTGTGGAATTGCAGCAACGGTTTGTTGAGCATGGTCAGGTCGTTGATCCACATTTTGGCCGGGGAGAAGGTGTGCAGCCACACCACCAGACCAGCGCAACGATCGTCGTAATTCGCG  >  NC_012967/70789‑70944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: