Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
JC | AE015451 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5681415 | 0 (0.000) | 25 (1.140) +CGGG |
22/308 | 0.1 | 100% | intergenic (‑133/+71) | PP_4986/PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein |
? | AE015451 | 5681416 = | 0 (0.000) | intergenic (‑134/+70) | PP_4986/PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein |
GGCCCGCGGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCTTGCACGAGCGCG > AE015451/5681189‑5681649 | cgcggccacgatcagccagatggcaccaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattggcactgcatgaaccgccgggGCTgcggcg > 1:140291‑M2/228‑236 (MQ=255) cgatcagccagatggcaccaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAt < 1:219102‑M2/18‑1 (MQ=255) accaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATcg < 2:276505‑M2/20‑1 (MQ=255) acggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACCCAAGGCCGCTCCCACTCCAGaccac > 1:441655‑M2/188‑237 (MQ=255) ggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgcgc < 2:297175‑M2/62‑1 (MQ=255) aggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggtGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCAc > 1:139336‑M2/166‑205 (MQ=255) aagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGcc > 1:113630‑M2/158‑220 (MQ=255) agcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAgg < 1:272192‑M2/80‑1 (MQ=255) gctgggttcctgttgtgatgctggtggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcatggccactgcatgaaccgccgggGCTGCTGCGCAGCCCTa < 2:82933‑M2/17‑1 (MQ=255) gggttcctgttgtgatgctgatggcttcgttctttgtgggagcggcattgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACaa < 1:134616‑M2/28‑1 (MQ=255) ttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc > 1:98904‑M2/102‑217 (MQ=255) atgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGCCCACCAGGCCCTGCGCCTCACCTCCTa > 2:264709‑M2/97‑169 (MQ=255) atgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAcc > 2:358027‑M2/97‑203 (MQ=255) gctgatggcttcgttctttgtgggagcggcattgtgtcgcgaaaggggcgcgaagcggccccaggccttcattgccactgcatgaaccgccggggctgc > 2:93949‑M2/95‑99 (MQ=255) ttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgtagcggccccaggccttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGCTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGc > 1:73901‑M2/86‑206 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgct > 2:20473‑M2/66‑71 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgct < 1:20473‑M2/6‑1 (MQ=255) ttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccaatgcatgaaccgccggggatgct < 2:98885‑M2/6‑1 (MQ=255) aaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCCCCCGCACCCCTGCCAGCTCCAACCTGccc > 1:139011‑M2/53‑237 (MQ=255) aaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGccc > 1:432288‑M2/53‑237 (MQ=255) gaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCcg < 2:176499‑M2/139‑1 (MQ=255) gcggccccagcctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACt < 1:36845‑M2/41‑1 (MQ=255) cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTc < 1:358029‑M2/206‑1 (MQ=255) atgaaccgccgggGCTGCTGCGCAGCCCTATcgcg > 2:175205‑M2/14‑35 (MQ=255) atgaaccgccgggGCTGCTGCGCAGCCCTATcgcg < 1:175206‑M2/22‑1 (MQ=255) gggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCTTGCACGAGcgcg > 1:343547‑M2/4‑237 (MQ=255) | GGCCCGCGGCCACGATCAGCCAGATGGCACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCTTGCACGAGCGCG > AE015451/5681189‑5681649 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |