Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	5401503	5401516	14	5 [0]	[2] 4	PP_4743/PP_4745	conserved protein of unknown function/transposase

AATATTAGCCCCCCGACCGCCCCCAAACGCCAGCAACGTCCCATGCAATGCCTCTCGCGCGCTGCGCGTTTCATTCCCTTGTGCATCAACCGCCCAGCCTGCCGGTATCGCCTCTCCCGCTTCAGCGGCCCGCAGCAGGTTCACGTAAGCCG  >  AE015451/5401507‑5401658           |                                                                                                                                              aaTATTAGCCCCCCGACCGCCCCCAAACGCCAGCAACGTCCCATGCAATGCCTCTcgc                                                                                                <  2:61111/58‑1 (MQ=255)    atTAGCCCCCCGACCGCCCCCAAACGCCAGCAACGTCCCATGCAATGCCTCTCGCGCGCTGCGCGTTTCATTCCCTTGTGCATCAACCGCCCAGCCTGCCGGTATCGCCTCTCCCGCTTCAGCGGCCCGCAGCAGGTTCACGTAAGCCg  <  1:85498/149‑1 (MQ=255)           ccccGACCGCCCCCAAACGCCAGCAACGTCCCATGCAATGCCTCTCGCGCGCTGCGCGTTTCATTCCCTTGTGCATCAACCGCCCAGCCTGCCGGTATCGCCTCTCCCGCTTCAGCGGCCCGCAGCAGGTTCACGTAAGCCg  >  1:218718/1‑142 (MQ=255)           ccccGACCGCCCCCAAACGCCAGCAACGTCCCATGCAATGCCTCTCGCGCGCTGCGCGTTTCATTCCCTTGTGCATCAACCGCCCAGCCTGCCGGTATCGCCTCTCCCGCTTCAGCGGCCCGCAGCAGGTTCACGTAAGCCg  <  2:218717/142‑1 (MQ=255)           |                                                                                                                                              AATATTAGCCCCCCGACCGCCCCCAAACGCCAGCAACGTCCCATGCAATGCCTCTCGCGCGCTGCGCGTTTCATTCCCTTGTGCATCAACCGCCCAGCCTGCCGGTATCGCCTCTCCCGCTTCAGCGGCCCGCAGCAGGTTCACGTAAGCCG  >  AE015451/5401507‑5401658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑