| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 653,157 | Δ1 bp | 8.2% | coding (1586/1962 nt) | ctpL ← | Methyl‑accepting chemotaxis protein CtpL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 653,157 | 0 | G | . | 8.2% | 162.1 / 8.7 | 49 | coding (1586/1962 nt) | ctpL | Methyl‑accepting chemotaxis protein CtpL |
| Reads supporting (aligned to +/- strand): ref base G (21/24); new base . (2/2); total (23/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.82e-02 | |||||||||||
CTGTGCCGTTACATCGGCAATCCGCACCGCTGTATC‑GGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCA > AE015451/652940‑653363 | ctgTGCCGTTACATCGGCAATCCGCACCGCTGTATC‑GGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAgcg < 1:639138/228‑1 (MQ=255) gTTACATCGGCAATCCGCACCGCTGTATC‑GGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTTCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCg < 2:489668/234‑1 (MQ=255) ttACATCGGCAATCCGCACCGCTGTATCGGGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATcctgtct > 1:905707/1‑230 (MQ=255) aTCGGCAATCCGCACCGCTGTATC‑GGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACg < 1:721690/235‑1 (MQ=255) cAATCCGCACCGCTGTATC‑GGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAg < 1:303220/236‑1 (MQ=255) aTCCGCACCGCTGTATC‑GGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGc > 1:569611/1‑235 (MQ=255) ggTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACggg > 1:115849/1‑236 (MQ=255) gTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCT‑‑‑‑CAC‑TG‑‑‑G‑‑‑CTCAGC‑GC‑ACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGAt > 2:317781/1‑233 (MQ=255) gCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCCCCTCATCGGCGACCACgg > 1:596067/1‑203 (MQ=255) gCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCt > 2:597347/1‑188 (MQ=255) gCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGcc > 1:814869/1‑235 (MQ=255) tGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACCGCCCATCTCGCCGGCACGGGCCGCTTc > 1:407549/1‑235 (MQ=255) cacaGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATc < 1:397610/236‑1 (MQ=255) ccATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑t < 2:905704/158‑1 (MQ=255) cATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTCA‑CTGGCTCAGCGCACCTCATCGGCGACCACGGCAAAGCCAc < 2:323104/192‑1 (MQ=255) cATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTCA‑CTGGCTCAGCGCACCTCATCGGCGACCACGGCAAAGCCAc > 1:323107/1‑192 (MQ=255) agccAGTGCCCCATCCGCCGCCTGGGCCTGGTGGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCtt < 1:69013/216‑1 (MQ=255) aTCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCT‑‑‑‑CAC‑TG‑‑‑G‑‑‑CTCAGC‑GC‑ACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTg < 1:317784/235‑1 (MQ=255) tCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGc < 1:133220/173‑1 (MQ=255) aGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcag > 1:41279/1‑236 (MQ=255) gtaccccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCCCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑GGAGCGCACCTCATCGGCg > 1:91928/4‑170 (MQ=255) ccccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTg < 1:299624/228‑1 (MQ=255) cccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGc < 2:901382/165‑1 (MQ=255) cccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGc > 1:901385/1‑165 (MQ=255) cccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTg < 1:157510/227‑1 (MQ=255) ccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCa < 1:187284/180‑1 (MQ=255) ctgggcctggTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCg > 1:917812/1‑235 (MQ=255) cAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGcc > 1:140044/1‑174 (MQ=255) tGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGcc < 2:791073/146‑1 (MQ=255) gcgcgcgcATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg > 1:642487/1‑236 (MQ=255) cgcgcAGCTCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGAGGTCGATCAACGCCAGGCTCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCaa < 2:747582/123‑1 (MQ=39) cgcATCCCCGCCACCGACCTTCTGGCGGCCTGCTGCAGGCGGTCGATCACCGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCAtc < 1:173961/135‑1 (MQ=255) cGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAAtt < 1:27136/236‑1 (MQ=255) cTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCAtt > 2:445703/1‑149 (MQ=255) tcgcggcCTGCTGCAGGCGGTCGATCACCGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATc < 2:116290/174‑1 (MQ=255) ggCGGTCGATCAACGCCTGGATCTCGCCAGTAGCCCCCGTGGTGCGCTGAGCCAG‑t < 2:479624/56‑1 (MQ=255) gTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgcgcg > 1:210681/1‑162 (MQ=255) aTCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACtt > 1:636623/1‑235 (MQ=255) cAACGCCTGGATCTCGCCGGTAGCGCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGAGCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAAt < 1:714837/150‑1 (MQ=255) gCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATc < 2:642484/233‑1 (MQ=255) tctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCa > 1:425924/1‑236 (MQ=255) ctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAg > 2:387366/1‑156 (MQ=255) ctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAg < 1:387369/156‑1 (MQ=255) ctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATc < 1:557290/225‑1 (MQ=255) ctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATc > 2:557287/1‑225 (MQ=255) tcGCCGGTAGCCCCCGTGGTTCGCTGAGCCAG‑TGAGCGCACCTCTTCGTCTACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcagc < 2:832504/117‑1 (MQ=38) tcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGa < 2:146366/35‑1 (MQ=255) cccccGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCCTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCAcc > 1:895668/1‑140 (MQ=255) tGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGa > 2:437709/1‑202 (MQ=255) | CTGTGCCGTTACATCGGCAATCCGCACCGCTGTATC‑GGAAATGGTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAG‑TGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCA > AE015451/652940‑653363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |