New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 1187295 | 62 (1.240) | 4 (0.090) | 4/316 | NT | 6.1% | coding (2500/3900 nt) | purL | Phosphoribosylformylglycinamidine synthase |
? | AE015451 | = 1187344 | 66 (1.410) | coding (2549/3900 nt) | purL | Phosphoribosylformylglycinamidine synthase |
CGTCAAGGCTGTCGGCATGGAGCTGTGCCCGGAGCTGGGCATCACCATTCCGGTCGGCAAAGACTCGATGTCGATGAAGACCAAGTGGAGCGACGAGGGCGTCGAGAAGAGCGTCACCTCGCCGATGTCGCTGATCATCACCGGCTTCGCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1187057‑1187295 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggccgcgATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATCAGGATCAGGTCGGTCTCGCCCTTGTCCATGCGCAGTTGCGGGGTCAGGGTCTTGCGGATGTCGGTGACCGGGGCGAAGCCGGTGATGATCAGCGACATCGGCGAGGTGACGCTCTTCTCGACGCCCTCGTCGCTC < AE015451/1187344‑1187144 CGTCAAGGCTGTCGGCATGGAGCTGTGCCCGGAGCTGGGCATCACCATTCCGGTCGGCAAAGACTCGATGTCGATGAAGACCAAGTGGAGCGACGAGGGCGTCGAGAAGAGCGTCACCTCGCCGATGTCGCTGATCATCACCGGCTTCGCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGCCAAGGGCGAGACCGACCTGATCCTGCTCGCCCT > 1:119170/1‑231 AGGGCGTCGAGAAGAGCGTCACCTCGCCGATGTCGCTGATCATCACCGGCTTCGCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCG > 1:836441/1‑144 AGGGCGTCGAGAAGAGCGTCACCTCGCCGATGTCGCTGATCATCACCGGCTTCGCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCG < 2:836438/144‑1 CCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGATCGCGCCGTAGGTCTGGGCGAGGATCGAGGCGCCCATGCGGTGTTTGCCGCGGCCCAG > 2:932817/1‑119 AACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATCAGGATCAGGTCGGTCTCGCCCTTGTCCACGCGCAGTTGCGGGGT > 1:431963/1‑164 ACTGCGCATGGACAGGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGACCTTGCCGGAGGTCTGGGCCAGGTTCGAGGGGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATAAGGATCAGGTCGGTCTCGCCCTTGTCCATGCGCAGTTGCGGGGTCAGGGTCTTGCGGATGTCGGTGACCGGGGCGA < 1:932820/195‑1 CCGACCTGATCCTGATCGACCTGGGCCGCGATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATCAGGATCAGGTCGGTCTCGCCCTTGTCCATGCGCAGTTGCGGGGTCAGGGTCTTGCGGATGTCGGTGACCGGGGCGAAGCCGGTGATGATCAGCGACATCGGCGAGGT > 1:729091/1‑203 GACCTGGGCCGCGATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATCAGGATCAGGTCGGTCTCGCCCTTGTCCATGCGCAGTTGCGGGGTCAGGGTCTTGCGGATGTCGGTGACCGGGGCGAAGCCGGTGATGATCAGCGACATCGGC > 1:210506/1‑181 CCTGGGCCGCGATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATCAGGATCAGGTCGGTCTCGCCCTTGTCCATGCGCAGTTGCGGGGTCAGGGTCTTGCGGATGTCGGTGACCGGGGCGAAGCCGGTGATGATCAGCGACATCGGCGAGGTGACGCTCTTCTCGGCGCCCGCGTC > 1:85007/1‑208 GGGCCGCGATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATCAGGATCAGGTCGGTCTCGCCCTTGTCCATGCGCAGTTGCGGGGTCAGGGTCTTGCGGATGTCGGTGACCGGGGCGAAGCCGGTGATGATCAGCGACATCGGCGAGGTGACGCTCTTCTCGACGCCCTCGTCGCTC < 1:877545/209‑1 CCGCGATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCCGTTTTTG < 2:622257/53‑1 CGTCAAGGCTGTCGGCATGGAGCTGTGCCCGGAGCTGGGCATCACCATTCCGGTCGGCAAAGACTCGATGTCGATGAAGACCAAGTGGAGCGACGAGGGCGTCGAGAAGAGCGTCACCTCGCCGATGTCGCTGATCATCACCGGCTTCGCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1187057‑1187295 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggccgcgATCTTGCCGTAGGTCTGGGCCAGGATCGAGGCGCCCATGCGGTTTTTGCCGCGGCCCAGGTCGATCAGGATCAGGTCGGTCTCGCCCTTGTCCATGCGCAGTTGCGGGGTCAGGGTCTTGCGGATGTCGGTGACCGGGGCGAAGCCGGTGATGATCAGCGACATCGGCGAGGTGACGCTCTTCTCGACGCCCTCGTCGCTC < AE015451/1187344‑1187144 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |