New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1614311 =	46 (0.920)	3 (0.060)	3/322	NT	7.4%	coding (295/1683 nt)	ushA	5'‑nucleotidase ‑ 2',3'‑cyclic phosphodiesterase
	?	AE015451	1614343 =	31 (0.650)					coding (263/1683 nt)	ushA	5'‑nucleotidase ‑ 2',3'‑cyclic phosphodiesterase

GCGCGCAAGGCGCTACCCGCCTGACCTACGGCGGCATCGCCACACTCGGTGCCATGCTCGATGAACTGCGAACGCAGGACCCCGATCTGCTGTTCATCGGGGCTGGCGACTTGATAGGGGGCAGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1614439‑1614311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccccgATGAACAGCAGATCGGGGTCCTGCGTTCGCAGTTCATCGAGCATGGCACCGAGTGTGGCGATGCCGCCGTAGGTCAGGCGGGTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCT  >  AE015451/1614343‑1614525                                                                                                                                                                                                                                                                                                                          GCGCGCAAGGCGCTACCCGCCTGACCTACGGCGGCATCGCCACACTCGGTGCCATGCTCGATGAACTGCGAACGCAGGACCCCGATCTGCTGTTCATCGGGGCTGGCGACTTGATAGGGGGCAGCCC                                                                                                                                                                                           <  2:456546/127‑1           CGCTCCCCGCCTGACCTACGGCGGCATCGCCACACTCGGTGCCATGCTCGATGAACTGCGAACGCAGGACCCCGATCTGCTGTTCATCGGGGCTGGCGACTTGATAGGGGGCAGCCCCGATGAACAGCAGATCGGGGTCCTGCGTTCGCAGTTCATCGAGCATGGC                                                                                                                                          <  1:205973/166‑1                                                   GCCATGCTGGATGAACTGCGAACGCAGGACCCCGATCTGCTGTTCATCGGGGCTGGCGACTTGATAGGGGGCAGCCCCGATGAACAGCAGATCGGGGTCCTGCGTTC                                                                                                                                                             <  1:47605/107‑1                                                          TCGATGAACTGCGAACGCAGGACCCCGATCTGCTGTTCATCGGGGCTGGCGACTTGATAGGGGGCAGCCCCGATGAACAGCAGATCGGGGTCCTGCGTTCGCAGTTCATCGAGCATGGCACCGAGTGTGGCG                                                                                                                             <  2:855708/132‑1                                                                                                                            GCCCCGATGAACAGCAGATCGGGGTCCTGCGTTCGCAGTTCATCGAGCATGGCACCGAGTGTGGCGATGCCGCCGTAGGTCAGGCGGGTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTat  >  2:721420/1‑187                                                                                                                                                                                                                                                                                                                          GCGCGCAAGGCGCTACCCGCCTGACCTACGGCGGCATCGCCACACTCGGTGCCATGCTCGATGAACTGCGAACGCAGGACCCCGATCTGCTGTTCATCGGGGCTGGCGACTTGATAGGGGGCAGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1614439‑1614311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccccgATGAACAGCAGATCGGGGTCCTGCGTTCGCAGTTCATCGAGCATGGCACCGAGTGTGGCGATGCCGCCGTAGGTCAGGCGGGTAGCGCCTTGCGCGCCAGCGTAGTCCTGGGGGTTGGGTTCCAGGTAGCCGTGGAGATCATTGATAGCCACGACGTTGATCTGGACGGGGGCAGGTGACTCT  >  AE015451/1614343‑1614525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.