New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1652529 =	48 (0.960)	3 (0.070)	3/310	NT	6.5%	coding (4240/4527 nt)	PP_1449	conserved exported protein of unknown function
	?	AE015451	1652543 =	43 (0.940)					coding (4226/4527 nt)	PP_1449	conserved exported protein of unknown function

TCAACACCCTGAGCGTGAAAGGCGATGTCAGGCTGAGCCAGGAGAAAAACCCGCAGGGCTATGTCAATGCGGCCAAATCGGTGGCAGGGCCGCTGGGAGGCAAGGTCGAGAAAAAGGCCGGTTCGGCCCTGAGCAAGGCAGACCCAGGGTTCTCGCCGACCGTCAGCCTCGACGTGTCGCATGCACAGCGTGACAATGTGGCGCGTCAGACCACGCTTAAAAGCAGCGACGGCATCGACCTGCAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1652777‑1652529 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacctgcaggtcgATGCCGTCGCTGCTTTTAAGCGTGGTCTGACGCGCCACATTGTCACGCTGTGCATGCGACACGTCGAGGCTGACGGTCGGCGAGAACCCTGGGTCTGCCTTGCTCAGGGCCGAACCGGCCTTTTTCTCGACCTTGCCTCCCAGCGGCCCTGCCACCGATTTGGCCGCATTGACATAGCCCTGCGGGTTTTTCTCCTGGCTCAGCCTGACATCGCCTTTCAC  >  AE015451/1652543‑1652763                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCAACACCCTGAGCGTGAAAGGCGATGTCAGGCTGAGCCAGGAGAAAAACCCGCAGGGCTATGTCAATGCGGCCAAATCGGTGGCAGGGCCGCTGGGAGGCAAGGTCGAGAAAAAGGCCGGTTCGGCCCTGAGCAAGGCAGACCCAGGGTTCTCGCCGACCGTCAGCCTCGACGTGTCGCATGCACAGCGTGACAATGTGGCGCGTCAGACCACGCTTAAAAGCAGCGACGGCATC                                                                                                                                                                                                                                            >  1:481031/1‑236                                                                                                                        GGTTCGGCCCTGAGCAAGGCAGACCCAGGGTTCTCGCCGACCGTCAGCCTCGACGTGTCGCATGCACAGCGTGACAATGTGGCGCGTCAGACCACGCTTAAAAGCAGCGACGGCATCGACC                                                                                                                                                                                                                                        <  2:867309/121‑1                                                                                                                                       AAGGCAGACCCAGGGTTCTCGCCGACCGTCAGCCTCGACGTGTCGCATGCACAGCGTGACAATGTGGCGCGTCAGACCACGCTTAAAAGCAGCGACGGCATCGACCTGCAGGTCGATGCCGTCGCTGCTTTTAAGCGTGGTCTGACGCGCC                                                                                                                                                                                           <  1:417619/151‑1                                                                                                                                                                                              GTGACAATGTGGCGCGTCAGACCACGCTTAAAAGCAGCGACGGCATCGGCCTGCAGGTCGATGCCGGCGCTGCTCTTAAGCGTGGTCTGTCGCGCCACATTGTCACGCTGTGCATGCGACACGTCGAGGC                                                                                                                                                         >  1:522190/1‑130                                                                                                                                                                                                        GGCGCGTCAGACCACGCTTAAAAGCAGCGACGGCATCGACCTGCAGGTCGATGCCGTCGCTGCTTTTAAGCGTGGTCTGACGCGCCACATTGTCACGCTGTGCATGCGACACGTCGAGGCTGACGGTCGGCGAGAACCCTGGGTCTGCCTT                                                                                                                          <  2:417616/151‑1                                                                                                                                                                                                                                            CGACCTGCAGGTCGATGCCGTCGCTGCTTTTAAGCGTGGTCTGACGCGCCACATTGTCACGCTGTGCATGCGACACGTCGAGGCTGACGGTCGGCTAGAACCCTGGGTGTGCCTTGCTCAGGGCCGAACCGGCCTTTTTCTCGACCTTGCCTCCCAGCGGCCCTGCCACCGATTTGGCCGCATTGACATAGCCCTGCGGGTTTTTCTCCTGGCTCAGCCTGACATCGCCTTTCAC  <  1:891370/235‑1                                                                                                                                                                                                                                               CCTGCAGGTCGATGCCGTCGCTGCTTTTAAGCGTGGTCTGACGCGCCACATTGTCACGCTGTGCATGCGACACGTCGAGGCTGACGGTCGGCGAGAACCCTGGGTCTGCCTTGCTCAGGGCCGAACC                                                                                                           >  2:518471/1‑127                                                                                                                                                                                                                                                    AGGTCGATGCCGTCGCTGCTTTTAAGCGTGGTCTGACGCGCCACATTGTCACGCTGTGCATGCGACACGTCGAGGCTGACGGTCGGCGAGAACCCTGGGTCTGCCTTGCTCAGGGCCGAACCGGCCTTTTTCTCGACCTTGCCTCCCAGCGGCCCTGCCACCGATTTGGCCGCATTGACATAGCCCT                                          <  2:149305/187‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCAACACCCTGAGCGTGAAAGGCGATGTCAGGCTGAGCCAGGAGAAAAACCCGCAGGGCTATGTCAATGCGGCCAAATCGGTGGCAGGGCCGCTGGGAGGCAAGGTCGAGAAAAAGGCCGGTTCGGCCCTGAGCAAGGCAGACCCAGGGTTCTCGCCGACCGTCAGCCTCGACGTGTCGCATGCACAGCGTGACAATGTGGCGCGTCAGACCACGCTTAAAAGCAGCGACGGCATCGACCTGCAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1652777‑1652529 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacctgcaggtcgATGCCGTCGCTGCTTTTAAGCGTGGTCTGACGCGCCACATTGTCACGCTGTGCATGCGACACGTCGAGGCTGACGGTCGGCGAGAACCCTGGGTCTGCCTTGCTCAGGGCCGAACCGGCCTTTTTCTCGACCTTGCCTCCCAGCGGCCCTGCCACCGATTTGGCCGCATTGACATAGCCCTGCGGGTTTTTCTCCTGGCTCAGCCTGACATCGCCTTTCAC  >  AE015451/1652543‑1652763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.