New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1665468	36 (0.720)	4 (0.080)	4/322	NT	8.8%	coding (400/1206 nt)	PP_1459	CBS domain protein
	?	AE015451	= 1665563	49 (1.030)					coding (305/1206 nt)	PP_1459	CBS domain protein

TCGACGATGCGTTCGATCGGCTCGTCGAGGTTGATGCCATCCACTTCGTTGCGCGGCACCAGGATGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGAACGGGCGCAGAATCAGCTTGGCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1665242‑1665468 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgccTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGAAAGTGCCTCTCGCACTGCTGCAGCCACTGGCCTGCCTGCTGGACGGCGCCGCCAAGCTGATTCTGCGCCCGTTCCGGGCACAGCCCACAGCGGTGGCCCTGCACACGCAGGAGGCCGACGACTTCGATGAGGATGAACAGCACGAAGCGCCTCGCCAGGGTCTGCTCGACGGCCT  <  AE015451/1665563‑1665338                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGACGATGCGTTCGATCGGCTCGTCGAGGTTGATGCCAGCCACTTCGTTGCGCGGCACCAGGATGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGAACGGGCGCAGAATCAGCTTGGCGGCGCCTGGCCCGGC                                                                                                                                                                                                                           <  1:172906/236‑1    ACGCTGCGTTCGACCGGCTCGTCGAGGTTGATGCCATCCACTTCGTTGCGCGGCACCAGGAAGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCGTGCGTGAGCAGGGCCTCCGCTGTGGGCTGCGCCCGGAACGGGCGCAGAATCAGCTTGGCGG                                                                                                                                                                                                                                        <  2:493399/220‑1                                           ACTTCGTTGCGCGGCACCAGGATGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGAACGGGCGCAGAATCAGCTTGGCGGCGCCTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGA                                                                                                                                                                                 >  1:561167/1‑236                                             TTCGTTGCGCGGCACCAGGAGGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGAACGGGCGCAGAATCAGCTTGGCG                                                                                                                                                                                                                                         <  1:924060/178‑1                                                            CAGGACGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGGACGGGCGCAGAATCAGCGTGG                                                                                                                                                                                                                                           >  1:172504/1‑161                                                               GATGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGAACGGGCGCAGAATCAGCTTGGCGGCGCCTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGAAAGTGCCTCTCGCACTGC                                                                                                                                                               <  2:561164/234‑1                                                                                                                                  TGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGAACGGGCGCAGAATCAGCTTGGCGGCGCCTGGCCCGGCGTAACCCGCAGGCGTT                                                                                                                                                                                                           <  1:265605/123‑1                                                                                                                                                                                                                            GCGTCGCCTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGAAAGTGCCTCTCGCACTGCTGCAGCCACTGGCCTGCCTGCTGGACGGCGCCGCCAAGCTGATTCTGCGCCCGTTCCGGGCACAGCCCACAGCGGTGGCCCTGCACACGCAGGAGGCCGACGACTTCGATGAGGATGAACAGCACGAAGCGCCTCGCCAGGGTCTGCTCGACGGCCT  <  2:405697/234‑1                                                                                                                                                                                                                                 GCCTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGAAAGTGCCTCTCGCACTGCTGCAGCCACTGGCCTGCCTGCTGGACGGCGCCGCCAAGCTGATTCTGCGCCCGTTCCGGGCACAGCCCACAGCGGTGGCCCTGCACACG                                                                      >  1:646070/1‑161                                                                                                                                                                                                                                 GCCTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGAAAGTGCCTCTCGCACTGCTGCAGCCACTGGCCTGCCTGCTGGACGGCGCCGCCAAGCTGATTCTGCGCCCGTTCCGGGCACAGCCCACAGCGGTGGCCCTACACACGCAG                                                                   >  1:297570/1‑164                                                                                                                                                                                                                                 GCCTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGAAAGTGCCTCTCGCACTGCTGCAGCCACTGGCCTGCCTGCTGGACGGCGCCGCCAAGCTGATTCTGCGCCCGTTCCGGGCACAGCCCACAGCGGTGGCCCT                                                                             >  2:663148/1‑154                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGACGATGCGTTCGATCGGCTCGTCGAGGTTGATGCCATCCACTTCGTTGCGCGGCACCAGGATGTCGTTGACGGTGATCTTGTCCAGCGACTGCAGGCCGTCGAGCAGACCCTGGCGAGGCGCTTCGTGCTGTTCATCCTCATCGAAGTCGTCGGCCTCCTGCGTGTGCAGGGCCACCGCTGTGGGCTGTGCCCGGAACGGGCGCAGAATCAGCTTGGCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1665242‑1665468 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgccTGGCCCGGCGTAACCCGCAGGCGTTCGTGAGCCTTGGTGCCAGCCTGCTGAAAGTGCCTCTCGCACTGCTGCAGCCACTGGCCTGCCTGCTGGACGGCGCCGCCAAGCTGATTCTGCGCCCGTTCCGGGCACAGCCCACAGCGGTGGCCCTGCACACGCAGGAGGCCGACGACTTCGATGAGGATGAACAGCACGAAGCGCCTCGCCAGGGTCTGCTCGACGGCCT  <  AE015451/1665563‑1665338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.