New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2250804	54 (1.080)	3 (0.070)	3/302	NT	5.9%	coding (135/1434 nt)	leuC	3‑isopropylmalate dehydratase large subunit
	?	AE015451	= 2250786	48 (1.070)					coding (117/1434 nt)	leuC	3‑isopropylmalate dehydratase large subunit

ATGAGGTCAAGCGCCGTGATGACGGCTCGTCCCTGATCTACATCGACCGCCACATCATCCACGAAGTGACGTCGCCCCAGGCCTTCGAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2250710‑2250804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccttcgaaggcctgGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGTAGATCAGGGACGAGCCGTCATCACGGCGCTTGACCTCATGGGCTTCCCAGAGTTTGTCGTAGAGCGTTTTGCCAGCCATCAGACTGTTCCTCATCAGCGTCTTTCTATGCCAAAGACCCCTTGGCTTGTACGGACGATGCTAGGGGGTTAGATTGAATAACTCAAATTCATAATTTTTATGCTTTGGATAAC  <  AE015451/2250786‑2250557                                                                                                                                                                                                                                                                                                                                       ATGAGGTCAAGCGCCGTGATGACGGCTCGTCCCTGATC‑ACATCGACCGCCACATCATCCACGAAGTGACGTCGCCCCAGGCCTTCGAAGGCCTGGGGCGACGTCACTTCGTGGATGATGTGGCGGTCG                                                                                                                                                                                                      >  1:417162/1‑128                               CCCTGATCTACATCGACCGCCACATCATCCACGAAGTGACGTCGCCCCAGGCCTTCGAAGGCCTGGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGTAGATCAGGGACGAGCCGTCATCACGGCGCTTGACCTCATGGGCTTCCCAGAGTTTGTCGTAGAGCGTT                                                                                                                              >  1:844118/1‑171                                            CGACCGCCACATCATCCACGAAGTGACGTCGCCCCAGGCCTTCGAAGGCCTGGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGT‑GATCAGGGACGAGCCGTCATCACGGCGCTTGACCTCAT                                                                                                                                                           >  2:417159/1‑128                                                                              CAGGCCTTCGAAGGCCTGGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGTAGATC                                                                                                                                                                                             >  1:256272/1‑61                                                                                GGCCTTCGAAGGCCTGGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGTAGATCAGGGACGAGCCGTCATCACGGCGCTTGACCTCATGGGCTTCCCAGAGTTTGTCGTAGAGCGTTTTGCCAGCCATCAGACTGTTCCTCATCAGCGTCTTTCTATGCCAAAGACCCCTTGGCTTGTAC                                                               <  1:102/185‑1                                                                                       GAAGGCCTGGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGTAGATCAGGGACGAGCCGTCATCACGGCGCTTGACCTCATGGGCTTCCCAGAGTTTGTCGTAGAGCGTTTTGCCAGCCATCAGACTGTTCCTCATCAGCGTCTTTCTATGCCAAAGACCCCTTGGCTTGTACGGACGAT                                                        >  1:682175/1‑185                                                                                              TGGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGTAGATCAGGGACGAGCCGTCATCACGGCGCTTGACCTCATGGGCTTCCCAGAGTTTGTCGTAGAGCGTTTTGCCAGCCATCAGACTGTTCCTCATCAGCGTCTTTCTATGCCAAAGACCCCTTGGCTTGTACGGACGATGCTAGGGGGTTAGATTGAATAACTCAAATTCATAATTTTTATGCTTTGGATAAC  >  1:656167/1‑232                                                                                                                                                                                                                                                                                                                                       ATGAGGTCAAGCGCCGTGATGACGGCTCGTCCCTGATCTACATCGACCGCCACATCATCCACGAAGTGACGTCGCCCCAGGCCTTCGAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2250710‑2250804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccttcgaaggcctgGGGCGACGTCACTTCGTGGATGATGTGGCGGTCGATGTAGATCAGGGACGAGCCGTCATCACGGCGCTTGACCTCATGGGCTTCCCAGAGTTTGTCGTAGAGCGTTTTGCCAGCCATCAGACTGTTCCTCATCAGCGTCTTTCTATGCCAAAGACCCCTTGGCTTGTACGGACGATGCTAGGGGGTTAGATTGAATAACTCAAATTCATAATTTTTATGCTTTGGATAAC  <  AE015451/2250786‑2250557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.