New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 4192478 | 63 (1.260) | 5 (0.110) | 5/298 | NT | 7.9% | intergenic (+84/‑565) | PP_5613/PP_5614 | protein of unknown function/protein of unknown function |
? | AE015451 | = 4192458 | 61 (1.380) | intergenic (+64/‑585) | PP_5613/PP_5614 | protein of unknown function/protein of unknown function |
CGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4192232‑4192478 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcatccatggatgcggcCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCG < AE015451/4192458‑4192232 CGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAACGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATC > 1:289885/1‑235 TTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCA < 1:53783/236‑1 TCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCTGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGAT > 1:560477/1‑188 GCCTTTTGACCCCGAACAGTATTCGCCAGATGACAGTCACTCGCTCTTCGACCCAAATGGAATCGTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGC < 2:185232/197‑1 TGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAA < 1:874112/236‑1 GAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAACACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTG < 2:602241/149‑1 GAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCAGCATCCATGGATG > 2:641076/1‑82 GCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATG < 2:896806/55‑1 GCGTACGCTGAAAACACCTCGCGTAAGTGAGGCCTCACCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTG < 1:734620/96‑1 CATCCATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGA < 2:759638/162‑1 CATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGC < 1:896809/55‑1 ATGGATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAACGACGTAACGGGCAATCAGAGCGTC > 1:218367/1‑236 GATGCGGCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCG < 1:887719/235‑1 GCCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCG < 2:447194/154‑1 CGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4192232‑4192478 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcatccatggatgcggcCTGACCTACGCAAGGTGTTTTCAGCGTACGCTTACTTTGACGCTGGGTCTATTGGATGCCGTGCTCACAAGATTCCATTTGGGTAGAAGAGCGAGTGAATGTCATCTGGCGAATACTGTTCGGGGTCAAAAGGCTCTAGGTCGGGAAACTCGTACTGATCCAAGCCCAAGCGACCAGCTTGGATGACCGTTAAAGCAGAAAGACGTAACGGGCAATCAGAGCGTCCG < AE015451/4192458‑4192232 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |