New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5988668	50 (1.000)	11 (0.230)	8/324	NT	21.8%	coding (1750/1788 nt)	kefB‑III	glutathione‑regulated potassium/H+ antiporter
	?	AE015451	5988956 =	31 (0.650)					intergenic (+250/‑296)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA

GGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGTGGGCGCCGAGCCGATTCGCGAGACGTTCTACTCCAGCCTGGAAATGACCCGCCGGGCACTGGTGGGGTTGGGCCTGAGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5988430‑5988668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCTGATTGTCCGGGGAAAG  >  AE015451/5988956‑5989185                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGTGGGCGCCGAGCCGATTCGCGAGACGTTCTACTCCAGCCTGGAAATGACCCGCCGGGCACTGGTGGGGTTGGGCCTGAGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGC                                                                                                                                                                                                                                           <  1:432432/236‑1    GCGTAACCGCCAGCATGTGCACAAATTGGCGGATGTGGGCGCCGAGCCGATTCGCGAGACGTTCTACTCCAGCCTGGAAATGACCCGCCGGGCACTGGTGGGGTTGGGCCTGAGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGG                                                                                                                                                                                                                                         >  1:368626/1‑235                           AATTGGCGGAGGTGGGCGCCGAGCCGATTCGCGAGACGTTCTACTCCAGCCTGGAAATGACCCGCCGGGCACTGGTGGGGTTGGGCCTGAGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCCCAATCTCAcaggcact                                                                                                                                                                                                                 <  1:695442/236‑9                                                                                                              GGCCTGCGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGG                                                                                                                                                                                                                                        <  2:714299/130‑1                                                                                                                CCTGAGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGC                                                                                                                                            <  2:768523/220‑1                                                                                                                CCTGAGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAA                                                                                                                                                                                       >  1:770385/1‑177                                                                                                                                   GCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTAGCGCCCGGCACCTGGAAGCCACCATGCAATTTCCTGACGATCCCCTCc                                                                                                                                                        >  2:226966/1‑188                                                                                                                                        CCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACACAAACCATCGCAAATCGTCTAATTCTCAGCT                                                                                                    >  1:268056/1‑236                                                                                                                                                                  ACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTT                                                                          >  1:533594/1‑236                                                                                                                                                                  ACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATT                                                                           <  1:772885/235‑1                                                                                                                                                                  ACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATC                                                                                                                                                                                 >  2:772882/1‑133                                                                                                                                                                                       AGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCA                                                     >  1:839439/1‑236                                                                                                                                                                                                                           AGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCT                  >  1:313815/1‑235                                                                                                                                                                                                                           AGACGGCCAAGGAGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTAC                                       >  1:508095/1‑214                                                                                                                                                                                                                                    AGGCGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGC                                                                                                                                            <  1:334467/104‑1                                                                                                                                                                                                                                       cGGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCAC                                                                                                                        <  2:600159/120‑1                                                                                                                                                                                                                                           GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCTGATTGTCCGGGGAAAG  <  1:567925/235‑1                                                                                                                                                                                                                                           GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCTGATTGTCCGGGGAAAG  <  1:400403/235‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGTGGGCGCCGAGCCGATTCGCGAGACGTTCTACTCCAGCCTGGAAATGACCCGCCGGGCACTGGTGGGGTTGGGCCTGAGCGATGAACAGGCGGCGGACCGCATTGCACGGTTTACCCAGCATGACGAAGAGGTGCTGGAGGCCCAGGGGCAAGTGCGTGATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5988430‑5988668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgggCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTCCTACGTTCACACCAATCCCAAGGAATTATCCTACACACCGTGTCGACGCCCGTCTGATTGTCCGGGGAAAG  >  AE015451/5988956‑5989185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.