New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1838824	49 (0.980)	4 (0.080)	4/322	NT	7.5%	coding (345/606 nt)	PP_1644	NAD(P)H dehydrogenase (quinone)
	?	AE015451	= 1838837	52 (1.090)					coding (332/606 nt)	PP_1644	NAD(P)H dehydrogenase (quinone)

GCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCG  >  AE015451/1838605‑1839047                                                                                                                                                                                                                            |                                                                                                                                                                                                                                 gCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGtgttcacctcca                                                                                                                                                                                                                      <  1:151818‑M1/232‑13 (MQ=255)       gCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGa                                                                                                                                                                                                                            >  1:883193/1‑219 (MQ=255)                    cacaGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCa                                                                                                                                                                                               >  2:862723/1‑235 (MQ=255)                    cacaGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCa                                                                                                                                                                                               >  1:334431/1‑235 (MQ=255)                      caGGGCGATGTCGTGTGGGGCGAGTTCGCGCGTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG                                                                                                                                                                                                                                  <  2:132850‑M1/199‑1 (MQ=255)                          gCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCAcc                                                                                                                                                                                        <  1:715082/236‑1 (MQ=255)                                       ggTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACAcgcc                                                                                                                                                                                                                >  2:354148‑M2/1‑195 (MQ=255)                                             gTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGctgctg                                                                                                                                                                     >  1:346948/1‑236 (MQ=255)                                               ccgcgCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTgg                                                                                                                                                                    <  1:565524/234‑1 (MQ=255)                                                cgcgCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCa                                                                                                                                                                               <  2:672781/223‑1 (MQ=255)                                                     ttGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCg                                                                                                                                                                                                   <  2:278090/198‑1 (MQ=255)                                                            cGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCa                                                                                                                                                           <  1:67819/231‑1 (MQ=255)                                                                    ccGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGaa                                                                                                                                                       >  1:568694/2‑227 (MQ=255)                                                                      gtggtgGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGGCGAcc                                                                                                                                                                                                >  1:85033/1‑184 (MQ=255)                                                                            gctggcGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGc                                                                                                                                                                                                     <  1:650970/173‑1 (MQ=255)                                                                              tggcGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACAcgccagcctgcacggcggccaggaaaccacc                                                                                                                                                                                     >  2:883190‑M2/1‑156 (MQ=255)                                                                                    cATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG                                                                                                                                                                                                                                  <  2:6989‑M1/137‑1 (MQ=255)                                                                                                cgccACCGCGGGGCTCGAGCAGTGCCGACTCGCGGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTg                                                                                                                                      <  1:413590/216‑1 (MQ=255)                                                                                                cgccACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTc                                                                                                                  <  1:405251/236‑1 (MQ=255)                                                                                                                gAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCa                                                                                                  <  1:673216/236‑1 (MQ=255)                                                                                                                 aGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCCCCAGCATGCCGTGGTGCATCAGCGGCGGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACAcgccagcctgcacggcggccaggaaaccaccctgctgtcgatgatgctgccgctgatgcaccacg                                                                                                                                                   >  1:121871‑M2/1‑121 (MQ=255)                                                                                                                 aGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTc                                                                                                                  <  2:357175/219‑1 (MQ=255)                                                                                                                         cGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGctgctg                                                                                                                                                                     <  2:699706/160‑1 (MQ=255)                                                                                                                         cGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGAGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCggg                                                                                                                                                                                                         >  2:51548/1‑123 (MQ=255)                                                                                                                           aCTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCGGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTcc                                                                                                                                                            <  2:163964/167‑1 (MQ=255)                                                                                                                                   tAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAg                                                                               >  1:62692/1‑236 (MQ=255)                                                                                                                                   tAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAg                                                                               >  1:849063/1‑236 (MQ=255)                                                                                                                                       gCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCg                                                                                                                 <  1:386027/198‑1 (MQ=255)                                                                                                                                              cATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAgg                                                                                                                                                         <  1:902855/151‑1 (MQ=255)                                                                                                                                              cATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAgg                                                                                                                                                         >  2:902852/1‑151 (MQ=255)                                                                                                                                              cATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGa                                                                                                                                                        >  1:778919/1‑152 (MQ=255)                                                                                                                                              cATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAgc                                                                                           >  2:626775/1‑213 (MQ=255)                                                                                                                                              cATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAgg                                                                     >  1:903507/1‑235 (MQ=255)                                                                                                                                                  aCCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGctgctg                                                                                                                                                                     >  1:872342/1‑135 (MQ=255)                                                                                                                                                   ccggCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTgg                                                                                                                                                                    <  2:778916/132‑1 (MQ=255)                                                                                                                                                            cGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGtgttcacctccaccgccagcctgcacggcggccaggaaaccaccctgctgtcgatgatgccgccgctgatgcaccacggcatgctggggatgggcctgccctacagcgagtcggcactgct                                                                                                         >  1:121871‑M1/1‑65 (MQ=255)                                                                                                                                                            cGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAgcgcg                                                      >  1:737144/1‑236 (MQ=255)                                                                                                                                                                     tCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTc                                                                                                                  <  2:434160/167‑1 (MQ=255)                                                                                                                                                                      cAGCGGCAGCATCATCGACAGCAGGGCGGTTTCCTGGCCGCCGTGCAGGCTGGCGtgttcacctccaccgccagcctgcacggcggccaggaaaccaccctgctgtcgatgatgctgccg                                                                                                                                                                 >  1:503571‑M1/1‑55 (MQ=255)                                                                                                                                                                         cGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACAcgccagcctgcacggcggccaggaaaccgccctgctgtcgatgatgctgccgctg                                                                                                                                                             >  1:503571‑M2/1‑65 (MQ=255)                                                                                                                                                                         cGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTc                                                                                                                  <  2:708566/163‑1 (MQ=255)                                                                                                                                                                         cGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGaa                                         >  1:343483/1‑236 (MQ=255)                                                                                                                                                                         cGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGa                                          >  1:484797/1‑235 (MQ=255)                                                                                                                                                                         cGGCAGCATCATCGACAGCAGGGTGGTTGCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGGGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTcc                                                                                                                                                            <  2:59467/121‑1 (MQ=255)                                                                                                                                                                          ggCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTc                                                                                                                  <  1:34379/162‑1 (MQ=255)                                                                                                                                                                              gcaTCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACCGGCCGGaa                                         >  1:460034/1‑231 (MQ=255)                                                                                                                                                                                atcatcGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGTGTTCACCTCCAC‑CGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCt                                                                                                             >  1:447954/1‑161 (MQ=255)                                                                                                                                                                                  catcGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCggg                                 >  1:562286/1‑235 (MQ=255)                                                                                                                                                                                     ggACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGtcatca                                                                        <  2:788914/192‑1 (MQ=255)                                                                                                                                                                                            agGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCCCCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGcc                                                                                              >  1:152713/1‑164 (MQ=255)                                                                                                                                                                                              ggtggtTTCCTGGCCGCCGTGCAGGCTGGCGtgttcacctccaccgccagcctgcacggcggccaggaaaccaccctgctgtcgatgatgctgccgctgatgcaccacggcatgctggtgatgggcctgccctacagcgagtcggcactgctcgagacccgtggtggcggcacgccttatggcgcca                                                                      >  2:883190‑M1/1‑31 (MQ=255)                                                                                                                                                                                              ggtggtTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCg                     >  1:387642/1‑235 (MQ=255)                                                                                                                                                                                                     tCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGt             >  1:354592/1‑236 (MQ=255)                                                                                                                                                                                                        gggCCGCCGGGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAgcgcg                                                      <  2:813455/191‑1 (MQ=255)                                                                                                                                                                                                           ccgccgTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCAGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAggcc                                                                            >  2:826941/1‑165 (MQ=255)                                                                                                                                                                                                                 tGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCg  <  1:741997/235‑1 (MQ=255)                                                                                                                                                                                                                 tGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTGGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCg  <  1:810996/235‑1 (MQ=255)                                                                                                                                                                                                                   cgggcgggcg‑GTGGAGGTGAACCCGCCGGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGcc                                                                                                                            <  2:127501/109‑1 (MQ=255)                                                                                                                                                                                                                   cAGGCTGGCG‑GTGGAGGTGACCACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGtcatca                                                                        <  1:260899/163‑1 (MQ=255)                                                                                                                                                                                                                   cAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCg  <  2:387639/233‑1 (MQ=255)                                                                                                                                                                                                                       atGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGcc                                                                                                                            <  1:237960/106‑1 (MQ=255)                                                                                                                                                                                                                         ggCGtgttcacctccaccgccagcctgcacggcggccaggaaaccaccctgctgtcgatgatgctgccgctgatgcaccacggcatgctggtgatgggcctgccctacagcgagtcggcactgctcgagacccgtggtggcggcacgccttatggcgccagccaccacgcaggcgccgatggcaagcgcgaactcgacc                               >  2:354148‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                                                 GCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCG‑GTGGAGGTGAACACGCCAGCCGGTTTGCCGACCAGCTCACCGCCGAGCCAAAGGCTGCTGGTGCCGTCCAGGAAGTACTTGAGTGGCGCTGCCATGTTGCCGAAGCGGGTCGGGCTGCCCAGTACCAGGCCAGCGCAGTGGCGCAGGTCATCAAGGGTGGCGTACAGCGCGCCACTGGCCGGAATATCCGGGGCCACCGCTTCGCATTCGGTGGAAATAGCCG  >  AE015451/1838605‑1839047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.