| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 4944756 | 68 (1.360) | 4 (0.090) | 4/312 | NT | 6.9% | intergenic (+116/+682) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
| ? | AE015451 | 4945407 = | 45 (0.970) | intergenic (+767/+31) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein | |||||
AACACCCTTCCCGGGCTTACAAGCCATAGTCTTTTTCCGAAAGCATGCCAGCAACATGGTATCGAATTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTGCCAACATCACCAGCAGTAACAGCGGCACACC > AE015451/4944521‑4944991 | aaCACCCTTCCCGGGCTTACAAGCCATAGTCTTTTTCCGAAAGCATGCCAGCAACATGGTATCGAATTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCT > 1:201086‑M1/1‑236 (MQ=255) cccTTCCCGTGCTTACAAGCCATAGTCTTTTTCCGAAAGCATGCCAGCAACATGGTATCGAATTTGACAAACTGGTGCTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGa < 1:518927/235‑1 (MQ=255) tCCGAAAGCATGCCAGCAACATGGTATCGAATTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCtt < 1:195593/202‑1 (MQ=255) gCATGCCAGCAACATGGTATCGAATTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCAcg > 1:372337/1‑236 (MQ=255) aCATGGTATCGAATTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATc < 2:372334/234‑1 (MQ=255) tATCGAATTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGaa < 1:403947/236‑1 (MQ=255) aTTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGaa > 1:754903/1‑236 (MQ=255) ttGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCcg > 1:613908/1‑222 (MQ=255) gACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATc > 2:630476/1‑218 (MQ=255) taaacTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcgcggcgcaggtccggcgggatcggcaggtcg < 2:475897‑M1/235‑72 (MQ=255) aaaCTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCGATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGac > 2:534613/1‑228 (MQ=255) ggTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGa > 2:140270/1‑231 (MQ=255) ttAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcgcggcgcaggtccggcgggatcggcagggcgtccttcagtggct > 1:261335‑M1/1‑149 (MQ=255) ggATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCAAATTGAGATTATGCGCCGCTGAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTc > 2:918230/1‑177 (MQ=255) ggATCATAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATc < 1:665568/189‑1 (MQ=255) aTCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAg > 2:273763/1‑203 (MQ=255) ccTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGGGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGACGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGa > 1:217413/1‑230 (MQ=255) ccTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTAGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCggg < 1:110090/235‑1 (MQ=255) cTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgcg < 1:867606/236‑1 (MQ=255) cTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgcg < 1:858831/236‑1 (MQ=255) cTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgc < 1:787614/235‑1 (MQ=255) cTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATCGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgcg < 1:856702/236‑1 (MQ=255) ccAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgcg < 2:613905/232‑1 (MQ=255) cAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAg > 1:169542/1‑235 (MQ=255) cAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAg > 1:31379/1‑235 (MQ=255) cAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCAACCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCAGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCaa > 1:882973/1‑218 (MQ=255) tACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCggg < 2:747831/226‑1 (MQ=255) tgctgACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcg > 2:589687‑M1/1‑122 (MQ=255) ctgACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATact > 2:489533/1‑235 (MQ=255) tgACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTg < 2:55505/156‑1 (MQ=255) gAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgcg < 2:754900/217‑1 (MQ=255) gAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGAcc < 1:344290/236‑1 (MQ=255) acaacaAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGAc > 2:878912/1‑233 (MQ=255) acaacaAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGAc < 1:878915/233‑1 (MQ=255) caacaaGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGtat < 1:421401/224‑1 (MQ=255) aacaaGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACcagca > 1:827839/1‑236 (MQ=255) aaGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGCACGCgg > 2:154764/1‑194 (MQ=255) aCCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGtata < 2:372697/208‑1 (MQ=255) aTCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGc > 1:914159/1‑236 (MQ=255) aTCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGc > 1:107029/1‑236 (MQ=255) aTTGGATGTAGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgcg < 1:173304/186‑1 (MQ=255) ggATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAAcgc > 2:856076/1‑165 (MQ=255) gTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGc > 2:367296/1‑141 (MQ=255) gTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGc < 1:367299/141‑1 (MQ=255) gTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGCACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACg > 2:162222/1‑207 (MQ=255) gTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGtat > 2:745226/1‑186 (MQ=255) gTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTgaaga > 1:906111/1‑235 (MQ=255) gtGGTGTGTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGAGCTTGAGCAATCCCAGAAACGGTCAAGAAACTTGCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAac < 1:230095/235‑1 (MQ=255) ggTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGgcg < 1:666032/173‑1 (MQ=255) gtgtTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGCAcgc > 2:1955/1‑154 (MQ=255) tttCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAg < 2:75832/206‑1 (MQ=255) tCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCggg < 2:254153/163‑1 (MQ=255) gTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAAcg < 1:767806/235‑1 (MQ=255) aaTTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAAcggcg < 1:592987/236‑1 (MQ=255) tttATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGt < 1:539365/236‑1 (MQ=255) tATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTc < 2:179204/143‑1 (MQ=255) gATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGc > 1:590812/1‑236 (MQ=255) aCCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCAcgc > 2:450449/1‑84 (MQ=255) aCCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGAt > 2:771535/1‑177 (MQ=255) aCCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGAt < 2:560022/177‑1 (MQ=255) aCCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGAt > 1:560025/1‑177 (MQ=255) aCCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAAc > 1:922311/1‑235 (MQ=255) aaTTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAAcggc > 2:661390/1‑219 (MQ=255) agaTTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAAcatcatcatgg > 1:639749/1‑234 (MQ=255) aaGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAg < 2:266720/202‑1 (MQ=255) cgccgcTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTGCCAACATc > 1:345930/1‑236 (MQ=255) gccgcTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTGCCAACa < 2:922308/233‑1 (MQ=255) gccgcTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTGCCAACATc < 1:868168/235‑1 (MQ=255) ccgcTCAAACGGCGCTCGATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcgcggcgcaggtccggcgggatcggcaggtcgtccttcagtggctctgggcgcttgcccttgccggcgcggtattggcgaatctggaacacatacgccagcacctgcgacaccgccaggtacagccccgccgggatgtcctgctcaa > 2:902854‑M1/1‑22 (MQ=255) ccgcTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGACGAGCAGGAAcggcgg > 2:211744/1‑206 (MQ=255) tCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTAt < 1:364581/205‑1 (MQ=255) aaaCGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGagg > 2:490662/1‑163 (MQ=255) aaCGGCGCTCGATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcgcggcgcaggtccggcgggatcggcaggtcgtccttcagtggctctgggcgcttgcccttgccggcgcggtattggcgaatctggaacacatacgccagcacctgcgccaccgccaggtacagccccgccgggatctcctgctcaagttcggtggagtaatagatcgcccgcgccagcgc < 1:825332‑M1/235‑221 (MQ=255) gcgcTCGATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcgcggcgcaggtccggcgggatcggcaggtcgtccttcagtggctctgggcgcttgcccttgccggcgcggtattggcgaatctggaacacatacgccagcacctgcgccaccgccaggtacagccccgccgggatctgctg > 2:342376‑M1/1‑11 (MQ=255) gcgcTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTGCCAACATCACCAGCAGTAACa < 1:853933/236‑1 (MQ=255) cTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTg < 2:790943/212‑1 (MQ=255) cGATCTcacaggcaccgcaaacctatcgccgaacagatcaactgtcgcggcgcgggtccggcgggatcggcaggtcgtccttcagtggctctgggcgcttgcccttgccggcgcggtattggcgaatctggaacacatacgccagcacctgcgccaccgccaggtacagccccgccgggatctcctgctcaagttcg < 1:272811‑M1/197‑192 (MQ=255) cGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGt > 1:1367/1‑191 (MQ=255) gATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcgcggcgcaggtccggcgggatcggcaggtcgtccttcagtggctctgggcgcttgcccttgccggcgcggtattggcgaatctggaacacatacgccagcacctgcgccaccgccaggtacagccccgccgggatctcctgctcaagttcg < 2:666624‑M1/196‑192 (MQ=255) gATCTcacaggcaacgcaaacctatcgccgaacagatcaactgtcgcggcgcaggtccggcgggatcggcaggtcgtccttcagtggctctgggcgcttgcccttgccggcgcggtattggcgaatctggaacacatacgccagcacctg > 1:612100‑M1/1‑5 (MQ=255) gATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGAc < 1:908005/126‑1 (MQ=255) gATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGAc > 2:908002/1‑126 (MQ=255) ttGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTGCCAACATCACCAGCAGTAACAGCGGCACAcc > 1:650392/1‑236 (MQ=255) | AACACCCTTCCCGGGCTTACAAGCCATAGTCTTTTTCCGAAAGCATGCCAGCAACATGGTATCGAATTTGACAAACTGGTACTTATCTTAAACAACTTGGATCCTAGCCAATACTGCTGACCGAACAACAAGTATAATTCGTACCATCAGGCTATTGGATGTCGTTGGTGTTTTTCGGATGGTAATTTATTGATCACCCAATTGAGATTAAGCGCCGCTCAAACGGCGCTCGATCTTGAGCAATCCCAGAAACGGTCAAGAAACTTTCAACTGTCACGCCGCAAATCCGGCGGAATCGGAAAGCAGGATGGTCGGGAACGCGGCAAAGTCGAGCGGGCGCAAGGCGTATACACAGACCAGCAGCACCACGATCGACAGGGCGATGTTGAAGGTGAAGAACACGTCGAGCAGGAACGGCGGTATCGGCAACATCATCATTGCCAACATCACCAGCAGTAACAGCGGCACACC > AE015451/4944521‑4944991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |