| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | AE015451 | 4,808,177 | Δ103 bp | 45.7% | intergenic (‑286/‑167) | PP_4234 ← / → dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 4808176 | 2 (0.040) | 5 (0.100) | 5/322 | NT | 45.7% | intergenic (‑285/‑270) | PP_4234/dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | AE015451 | 4808280 = | 10 (0.210) | intergenic (‑389/‑166) | PP_4234/dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 | |||||
CGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGATCTGCCAAGGCGAAGACATGCGCGTTCTCCTGCTCTTCCTCACACTCCTACT > AE015451/4808104‑4808480 | agtcaagctgacaatgtgtcgcggtgtgtatagggcaatgggcggaattcgcgctttggcgggtaggtgtttggcgggaggttttcagcgcctgggaggtgttcgccgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCa < 1:732781‑M2/60‑1 (MQ=255) tgtgtatagggcaatgggcggaattcgcgctttggcgggtaggtgtttggcgggaggttttcagcgcctgggaggtgttcgccgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGaa < 1:391742‑M2/63‑1 (MQ=255) atgggcggaattcgcgctttggcgggtaggtgtttggcgggaggttttcagcgcctgggaggtgttcgccgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccCCTCAAAATTCCAAcgccg > 2:391739‑M2/140‑158 (MQ=255) gcggaattcgcgctttggcggggaggtgtttggcgggaggttttcagcgcctgggaggtggtcgccgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccCCTCaaa > 1:86447‑M2/136‑142 (MQ=255) cgggtttacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGAccc < 2:734814/156‑1 (MQ=255) ggtttacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGaa < 2:746683/169‑1 (MQ=255) tacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGcccc > 1:365323/3‑109 (MQ=255) tacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGcccc < 2:365320/107‑1 (MQ=255) tacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCtt < 2:809836/216‑1 (MQ=255) gttttcagcgcctgggaggtgttcgccgggggattttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCtt < 2:156876‑M2/72‑1 (MQ=255) cTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAAct > 2:577681/1‑150 (MQ=255) aGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAACCTCTTACTACTCCTGACCCACCCCCAACACACGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGATCTGCCaa > 2:414790/1‑227 (MQ=255) gAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGCTCTGccc > 1:146739/1‑218 (MQ=255) aaaTCCTCCGGCAAACCCCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGATCTGCCAAGGCGAAGACATgc < 2:734219/231‑1 (MQ=255) ctccCGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGATCTGCCAAGGCGAAGACATGCGCGTTCTCCt < 1:627921/236‑1 (MQ=255) aaTTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCACCCCCAGCCAGCATGGCCCCATTcc > 1:2854/1‑183 (MQ=255) ttCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCa < 2:860027/156‑1 (MQ=255) cccCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGATCTGCCAAGGCGAAGACATGCGCGTTCTCCTGCTCTTCCTCACACTCCTACt > 2:788723‑M2/4‑204 (MQ=255) cccCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGATCTGCCAAGGCGAAGACATGCGCGTTCTCCTGCTCTTCCTCACACTCCTACt < 1:788726‑M2/201‑1 (MQ=255) | CGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAGACCCTGCAAACCCAGAACAAACTCTTACTACTCCTGACCCACCCCCAACACCCGCGTTAACCTTCATTTAATCAACCCCAGCCAGCATGGCCCCATTCCCAGATCTGCCAAGGCGAAGACATGCGCGTTCTCCTGCTCTTCCTCACACTCCTACT > AE015451/4808104‑4808480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |